Csor.00g176750 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCTCAACCAACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTTTCGATCTTCAGCTTATTTAGATCTCGAGATAGCAGAAAGAGGCGAGATGAAACGATAGACGATATGAGAAAGGTGTGGCCGAGCGATGAAGACAGAGACCGATATTGGGTGGCTGAGCCTGGCATTGATAGGAAAGCTAAGGCTTACATCGACAAGATTCATACCCAAATCCGCTCTTCTGGAACTGAATGA ATGGCCTCAACCAACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTTTCGATCTTCAGCTTATTTAGATCTCGAGATAGCAGAAAGAGGCGAGATGAAACGATAGACGATATGAGAAAGGTGTGGCCGAGCGATGAAGACAGAGACCGATATTGGGTGGCTGAGCCTGGCATTGATAGGAAAGCTAAGGCTTACATCGACAAGATTCATACCCAAATCCGCTCTTCTGGAACTGAATGA ATGGCCTCAACCAACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTTTCGATCTTCAGCTTATTTAGATCTCGAGATAGCAGAAAGAGGCGAGATGAAACGATAGACGATATGAGAAAGGTGTGGCCGAGCGATGAAGACAGAGACCGATATTGGGTGGCTGAGCCTGGCATTGATAGGAAAGCTAAGGCTTACATCGACAAGATTCATACCCAAATCCGCTCTTCTGGAACTGAATGA MASTNNKRQKPKSPSCFFSIFSLFRSRDSRKRRDETIDDMRKVWPSDEDRDRYWVAEPGIDRKAKAYIDKIHTQIRSSGTE Homology
BLAST of Csor.00g176750 vs. NCBI nr
Match: KAG6586063.1 (hypothetical protein SDJN03_18796, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 166 bits (421), Expect = 6.86e-52 Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
BLAST of Csor.00g176750 vs. NCBI nr
Match: KAA0056089.1 (hypothetical protein E6C27_scaffold323G00470 [Cucumis melo var. makuwa] >TYJ96428.1 hypothetical protein E5676_scaffold546G00610 [Cucumis melo var. makuwa]) HSP 1 Score: 112 bits (280), Expect = 2.50e-30 Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0
BLAST of Csor.00g176750 vs. NCBI nr
Match: KAG6599163.1 (hypothetical protein SDJN03_08941, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 111 bits (278), Expect = 4.91e-30 Identity = 56/84 (66.67%), Postives = 69/84 (82.14%), Query Frame = 0
BLAST of Csor.00g176750 vs. NCBI nr
Match: XP_010094905.1 (uncharacterized protein LOC21405464 [Morus notabilis] >EXB57548.1 hypothetical protein L484_022654 [Morus notabilis]) HSP 1 Score: 76.3 bits (186), Expect = 6.37e-16 Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 0
BLAST of Csor.00g176750 vs. NCBI nr
Match: GFY89128.1 (hypothetical protein Acr_06g0010680 [Actinidia rufa]) HSP 1 Score: 73.9 bits (180), Expect = 4.44e-15 Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0
BLAST of Csor.00g176750 vs. ExPASy TrEMBL
Match: A0A0A0LJ24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034820 PE=4 SV=1) HSP 1 Score: 112 bits (281), Expect = 8.53e-31 Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 0
BLAST of Csor.00g176750 vs. ExPASy TrEMBL
Match: A0A5D3BDY2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00610 PE=4 SV=1) HSP 1 Score: 112 bits (280), Expect = 1.21e-30 Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0
BLAST of Csor.00g176750 vs. ExPASy TrEMBL
Match: W9R5Q4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022654 PE=4 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 3.09e-16 Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 0
BLAST of Csor.00g176750 vs. ExPASy TrEMBL
Match: A0A7J0ERL5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_06g0010680 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.15e-15 Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0
BLAST of Csor.00g176750 vs. ExPASy TrEMBL
Match: V4SLM0 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013222mg PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 1.01e-13 Identity = 32/59 (54.24%), Postives = 44/59 (74.58%), Query Frame = 0
BLAST of Csor.00g176750 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 4.8e-09 Identity = 34/59 (57.63%), Postives = 40/59 (67.80%), Query Frame = 0
BLAST of Csor.00g176750 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 3.1e-08 Identity = 30/51 (58.82%), Postives = 34/51 (66.67%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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