Csor.00g176750 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g176750
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionBZIP transcription factor family protein
LocationCsor_Chr12: 12528627 .. 12528872 (-)
RNA-Seq ExpressionCsor.00g176750
SyntenyCsor.00g176750
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCTCAACCAACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTTTCGATCTTCAGCTTATTTAGATCTCGAGATAGCAGAAAGAGGCGAGATGAAACGATAGACGATATGAGAAAGGTGTGGCCGAGCGATGAAGACAGAGACCGATATTGGGTGGCTGAGCCTGGCATTGATAGGAAAGCTAAGGCTTACATCGACAAGATTCATACCCAAATCCGCTCTTCTGGAACTGAATGA

mRNA sequence

ATGGCCTCAACCAACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTTTCGATCTTCAGCTTATTTAGATCTCGAGATAGCAGAAAGAGGCGAGATGAAACGATAGACGATATGAGAAAGGTGTGGCCGAGCGATGAAGACAGAGACCGATATTGGGTGGCTGAGCCTGGCATTGATAGGAAAGCTAAGGCTTACATCGACAAGATTCATACCCAAATCCGCTCTTCTGGAACTGAATGA

Coding sequence (CDS)

ATGGCCTCAACCAACAACAAGAGACAAAAGCCGAAGTCGCCCTCGTGCTTCTTTTCGATCTTCAGCTTATTTAGATCTCGAGATAGCAGAAAGAGGCGAGATGAAACGATAGACGATATGAGAAAGGTGTGGCCGAGCGATGAAGACAGAGACCGATATTGGGTGGCTGAGCCTGGCATTGATAGGAAAGCTAAGGCTTACATCGACAAGATTCATACCCAAATCCGCTCTTCTGGAACTGAATGA

Protein sequence

MASTNNKRQKPKSPSCFFSIFSLFRSRDSRKRRDETIDDMRKVWPSDEDRDRYWVAEPGIDRKAKAYIDKIHTQIRSSGTE
Homology
BLAST of Csor.00g176750 vs. NCBI nr
Match: KAG6586063.1 (hypothetical protein SDJN03_18796, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 166 bits (421), Expect = 6.86e-52
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0

Query: 1  MASTNNKRQKPKSPSCFFSIFSLFRSRDSRKRRDETIDDMRKVWPSDEDRDRYWVAEPGI 60
          MASTNNKRQKPKSPSCFFSIFSLFRSRDSRKRRDETIDDMRKVWPSDEDRDRYWVAEPGI
Sbjct: 1  MASTNNKRQKPKSPSCFFSIFSLFRSRDSRKRRDETIDDMRKVWPSDEDRDRYWVAEPGI 60

Query: 61 DRKAKAYIDKIHTQIRSSGTE 81
          DRKAKAYIDKIHTQIRSSGTE
Sbjct: 61 DRKAKAYIDKIHTQIRSSGTE 81

BLAST of Csor.00g176750 vs. NCBI nr
Match: KAA0056089.1 (hypothetical protein E6C27_scaffold323G00470 [Cucumis melo var. makuwa] >TYJ96428.1 hypothetical protein E5676_scaffold546G00610 [Cucumis melo var. makuwa])

HSP 1 Score: 112 bits (280), Expect = 2.50e-30
Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0

Query: 2  ASTNNKRQK-PKSPSCFFSIFSLFRSRDSRKRRDE--TIDDMRKVWPSDEDRDRYWVAEP 61
          +S NNKRQK PKS SC FSIF LF+SRD  KR D+  T+DD RKVWPSD D+ R+WVAEP
Sbjct: 3  SSANNKRQKRPKSTSCCFSIFGLFKSRDGGKRWDDAMTMDDTRKVWPSDGDKGRHWVAEP 62

Query: 62 GIDRKAKAYIDKIHTQIRSS 78
          GIDRKAKAYI+KIH QIRSS
Sbjct: 63 GIDRKAKAYIEKIHHQIRSS 82

BLAST of Csor.00g176750 vs. NCBI nr
Match: KAG6599163.1 (hypothetical protein SDJN03_08941, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 111 bits (278), Expect = 4.91e-30
Identity = 56/84 (66.67%), Postives = 69/84 (82.14%), Query Frame = 0

Query: 1  MASTNNKRQKPKSPSCFFSIFSLFRSRDSRKRRDE---TIDDMRKVWPSDEDRDRYWVAE 60
          MAS+N++R+KPKSPSC FSI +LF+SR  RKR D+    ++D RKVWPSD+D+ R+WVAE
Sbjct: 1  MASSNDERRKPKSPSCCFSISTLFKSRARRKRWDDDAIAMEDTRKVWPSDDDKGRHWVAE 60

Query: 61 PGIDRKAKAYIDKIHTQIRSSGTE 81
          PGIDRKAKAYID+IH QIR S  E
Sbjct: 61 PGIDRKAKAYIDRIHYQIRYSVAE 84

BLAST of Csor.00g176750 vs. NCBI nr
Match: XP_010094905.1 (uncharacterized protein LOC21405464 [Morus notabilis] >EXB57548.1 hypothetical protein L484_022654 [Morus notabilis])

HSP 1 Score: 76.3 bits (186), Expect = 6.37e-16
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 0

Query: 5  NNKRQKPKSPSCFFSIFSLFRSRDSRKRRDETIDDMRKVWPSDEDRDRYWVAEPGIDRKA 64
          N+ RQK  S     S FSLFR + +R+  D  ++DMR+VWPSDEDR R WVAEPGIDRKA
Sbjct: 6  NSSRQKKGS-----SFFSLFRFKRNRRVDDYAVEDMRRVWPSDEDRGR-WVAEPGIDRKA 65

Query: 65 KAYIDKIHTQIRSS 78
          +A+I KIH  + ++
Sbjct: 66 EAFIAKIHKNMNTA 73

BLAST of Csor.00g176750 vs. NCBI nr
Match: GFY89128.1 (hypothetical protein Acr_06g0010680 [Actinidia rufa])

HSP 1 Score: 73.9 bits (180), Expect = 4.44e-15
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0

Query: 5  NNKRQKPKSPSCFFSIFSLFRS-RDSRKRRDETIDD---MRKVWPSDEDRDRYWVAEPGI 64
          NN++QK  S SC FS F++F++ R S++  D + DD     K+WPSDEDR  + VAEPGI
Sbjct: 4  NNRQQKKSSSSCLFSFFNMFKAKRSSKEVEDNSRDDPVRYHKLWPSDEDRG-WCVAEPGI 63

Query: 65 DRKAKAYIDKIHTQ 74
          DRKA  YIDKI TQ
Sbjct: 64 DRKATTYIDKIRTQ 76

BLAST of Csor.00g176750 vs. ExPASy TrEMBL
Match: A0A0A0LJ24 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034820 PE=4 SV=1)

HSP 1 Score: 112 bits (281), Expect = 8.53e-31
Identity = 60/83 (72.29%), Postives = 68/83 (81.93%), Query Frame = 0

Query: 2  ASTNNKRQK-PKSPSCFFSIFSLFRSRDSRKRRDE--TIDDMRKVWPSDEDRDRYWVAEP 61
          +S NNKRQK  KS SC FSIFSLF+SRD  KR D+  T+DD RKVWPSD D+ R+WVAEP
Sbjct: 3  SSANNKRQKRQKSTSCCFSIFSLFKSRDGGKRWDDAMTMDDTRKVWPSDGDKGRHWVAEP 62

Query: 62 GIDRKAKAYIDKIHTQIRSSGTE 81
          GIDRKAKAYI+KIH QIRSS T+
Sbjct: 63 GIDRKAKAYIEKIHHQIRSSQTQ 85

BLAST of Csor.00g176750 vs. ExPASy TrEMBL
Match: A0A5D3BDY2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold546G00610 PE=4 SV=1)

HSP 1 Score: 112 bits (280), Expect = 1.21e-30
Identity = 59/80 (73.75%), Postives = 66/80 (82.50%), Query Frame = 0

Query: 2  ASTNNKRQK-PKSPSCFFSIFSLFRSRDSRKRRDE--TIDDMRKVWPSDEDRDRYWVAEP 61
          +S NNKRQK PKS SC FSIF LF+SRD  KR D+  T+DD RKVWPSD D+ R+WVAEP
Sbjct: 3  SSANNKRQKRPKSTSCCFSIFGLFKSRDGGKRWDDAMTMDDTRKVWPSDGDKGRHWVAEP 62

Query: 62 GIDRKAKAYIDKIHTQIRSS 78
          GIDRKAKAYI+KIH QIRSS
Sbjct: 63 GIDRKAKAYIEKIHHQIRSS 82

BLAST of Csor.00g176750 vs. ExPASy TrEMBL
Match: W9R5Q4 (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022654 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 3.09e-16
Identity = 41/74 (55.41%), Postives = 53/74 (71.62%), Query Frame = 0

Query: 5  NNKRQKPKSPSCFFSIFSLFRSRDSRKRRDETIDDMRKVWPSDEDRDRYWVAEPGIDRKA 64
          N+ RQK  S     S FSLFR + +R+  D  ++DMR+VWPSDEDR R WVAEPGIDRKA
Sbjct: 6  NSSRQKKGS-----SFFSLFRFKRNRRVDDYAVEDMRRVWPSDEDRGR-WVAEPGIDRKA 65

Query: 65 KAYIDKIHTQIRSS 78
          +A+I KIH  + ++
Sbjct: 66 EAFIAKIHKNMNTA 73

BLAST of Csor.00g176750 vs. ExPASy TrEMBL
Match: A0A7J0ERL5 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_06g0010680 PE=4 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 2.15e-15
Identity = 41/74 (55.41%), Postives = 52/74 (70.27%), Query Frame = 0

Query: 5  NNKRQKPKSPSCFFSIFSLFRS-RDSRKRRDETIDD---MRKVWPSDEDRDRYWVAEPGI 64
          NN++QK  S SC FS F++F++ R S++  D + DD     K+WPSDEDR  + VAEPGI
Sbjct: 4  NNRQQKKSSSSCLFSFFNMFKAKRSSKEVEDNSRDDPVRYHKLWPSDEDRG-WCVAEPGI 63

Query: 65 DRKAKAYIDKIHTQ 74
          DRKA  YIDKI TQ
Sbjct: 64 DRKATTYIDKIRTQ 76

BLAST of Csor.00g176750 vs. ExPASy TrEMBL
Match: V4SLM0 (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013222mg PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 1.01e-13
Identity = 32/59 (54.24%), Postives = 44/59 (74.58%), Query Frame = 0

Query: 18 FSIFSLFRSRDSRKRRDETIDDM----RKVWPSDEDRDRYWVAEPGIDRKAKAYIDKIH 72
          FS+ ++F+SR + +R ++  DD+    RK+WPSDED+  YWVAEPGIDRKA A+I K H
Sbjct: 11 FSLLNMFKSRRTNRRWEDPWDDVGSTPRKIWPSDEDKGAYWVAEPGIDRKASAFITKFH 69

BLAST of Csor.00g176750 vs. TAIR 10
Match: AT3G05858.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G26620.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 4.8e-09
Identity = 34/59 (57.63%), Postives = 40/59 (67.80%), Query Frame = 0

Query: 18 FSIFSLFRSRDS-RKRRDETIDDM---RKVWPSDEDRDRYWVAEPGIDRKAKAYIDKIH 73
          FS+FS F++R S R   D + DD    RK   SDED+ RYWVAEPGIDRKA A+I K H
Sbjct: 13 FSLFSFFKTRRSHRVEADGSWDDFGYTRKAMASDEDK-RYWVAEPGIDRKASAFIAKFH 70

BLAST of Csor.00g176750 vs. TAIR 10
Match: AT5G26620.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G05858.1); Has 48 Blast hits to 48 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 48; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 55.1 bits (131), Expect = 3.1e-08
Identity = 30/51 (58.82%), Postives = 34/51 (66.67%), Query Frame = 0

Query: 25 RSRDSRKRRDETIDDM---RKVWPSDEDRDRYWVAEPGIDRKAKAYIDKIH 73
          RS   R   D + DD+   RK W SDED+ RYWVAEPGIDRKA A+I K H
Sbjct: 5  RSSHHRVEADASWDDVIYTRKAWASDEDK-RYWVAEPGIDRKASAFIAKFH 54

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6586063.16.86e-52100.00hypothetical protein SDJN03_18796, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAA0056089.12.50e-3073.75hypothetical protein E6C27_scaffold323G00470 [Cucumis melo var. makuwa] >TYJ9642... [more]
KAG6599163.14.91e-3066.67hypothetical protein SDJN03_08941, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_010094905.16.37e-1655.41uncharacterized protein LOC21405464 [Morus notabilis] >EXB57548.1 hypothetical p... [more]
GFY89128.14.44e-1555.41hypothetical protein Acr_06g0010680 [Actinidia rufa][more]
Match NameE-valueIdentityDescription
A0A0A0LJ248.53e-3172.29Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G034820 PE=4 SV=1[more]
A0A5D3BDY21.21e-3073.75Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
W9R5Q43.09e-1655.41Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_022654 PE=4 SV=1[more]
A0A7J0ERL52.15e-1555.41Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_06g0010680 PE=4 SV=1[more]
V4SLM01.01e-1354.24Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10013222mg PE=4 ... [more]
Match NameE-valueIdentityDescription
AT3G05858.14.8e-0957.63unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G26620.13.1e-0858.82unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33511OS06G0632400 PROTEINcoord: 2..77
NoneNo IPR availablePANTHERPTHR33511:SF17RIBOSOMAL PROTEIN S12coord: 2..77

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g176750.m01Csor.00g176750.m01mRNA