Csor.00g166110 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g166110
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	Ubiquitin
Location	Csor_Chr05: 122638 .. 123108 (-)
RNA-Seq Expression	Csor.00g166110
Synteny	Csor.00g166110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATCTTTGTCAAGACGCTTACCGGGAAGACTATAACTCTCGAGGTCGAGAGTTCTGATACCATCGACAACGTCAAGGCAAAGATTCAGGACAAGGAGGGAATACCGCCGGACCAGCAGCGTCTTATATTTGCCGGTAAGCAGCTGGAGGATGGTCGAACTCTTGCCGACTACAACATCCAGAAGGAGTCCACGCTCCATCTTGTGTTAAGGCTCCGTGGTGGTGCTAAGAAGCGTAAGAAGAAGACCTACACCAAGCCTAAGAAGATTAAGCACAAGAAGAAGAAGGTCAAGCTCGCCGTTCTTCAGTTTTACAAGGTCGACGATTCTGGAAAGGTTCAGAGGCTTAGGAAGGAGTGCCCTAACGCTGAATGCGGAGCTGGTACCTTTATGGCCAATCATTTTGATCGTCATTACTGTGGCAAGTGTGGTTTGACTTACGTGTATCAGAAGCCCGGCGGCGATTAG

mRNA sequence

ATGCAGATCTTTGTCAAGACGCTTACCGGGAAGACTATAACTCTCGAGGTCGAGAGTTCTGATACCATCGACAACGTCAAGGCAAAGATTCAGGACAAGGAGGGAATACCGCCGGACCAGCAGCGTCTTATATTTGCCGGTAAGCAGCTGGAGGATGGTCGAACTCTTGCCGACTACAACATCCAGAAGGAGTCCACGCTCCATCTTGTGTTAAGGCTCCGTGGTGGTGCTAAGAAGCGTAAGAAGAAGACCTACACCAAGCCTAAGAAGATTAAGCACAAGAAGAAGAAGGTCAAGCTCGCCGTTCTTCAGTTTTACAAGGTCGACGATTCTGGAAAGGTTCAGAGGCTTAGGAAGGAGTGCCCTAACGCTGAATGCGGAGCTGGTACCTTTATGGCCAATCATTTTGATCGTCATTACTGTGGCAAGTGTGGTTTGACTTACGTGTATCAGAAGCCCGGCGGCGATTAG

Coding sequence (CDS)

ATGCAGATCTTTGTCAAGACGCTTACCGGGAAGACTATAACTCTCGAGGTCGAGAGTTCTGATACCATCGACAACGTCAAGGCAAAGATTCAGGACAAGGAGGGAATACCGCCGGACCAGCAGCGTCTTATATTTGCCGGTAAGCAGCTGGAGGATGGTCGAACTCTTGCCGACTACAACATCCAGAAGGAGTCCACGCTCCATCTTGTGTTAAGGCTCCGTGGTGGTGCTAAGAAGCGTAAGAAGAAGACCTACACCAAGCCTAAGAAGATTAAGCACAAGAAGAAGAAGGTCAAGCTCGCCGTTCTTCAGTTTTACAAGGTCGACGATTCTGGAAAGGTTCAGAGGCTTAGGAAGGAGTGCCCTAACGCTGAATGCGGAGCTGGTACCTTTATGGCCAATCATTTTGATCGTCATTACTGTGGCAAGTGTGGTTTGACTTACGTGTATCAGAAGCCCGGCGGCGATTAG

Protein sequence

MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYNIQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKECPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD

Homology

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BLAST of Csor.00g166110 vs. ExPASy Swiss-Prot
Match: P62980 (Ubiquitin-40S ribosomal protein S27a OS=Solanum lycopersicum OX=4081 GN=UBI3 PE=1 SV=2)

HSP 1 Score: 305.4 bits (781), Expect = 3.6e-82
Identity = 153/156 (98.08%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDD+GKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDTGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 157
           CPNAECGAGTFMANHFDRHYCGKCGLTYVY K GGD
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD 156

[Close]

BLAST of Csor.00g166110 vs. ExPASy Swiss-Prot
Match: P62981 (Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum OX=4113 GN=UBI3 PE=2 SV=2)

HSP 1 Score: 305.4 bits (781), Expect = 3.6e-82
Identity = 153/156 (98.08%), Postives = 154/156 (98.72%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDD+GKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDTGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 157
           CPNAECGAGTFMANHFDRHYCGKCGLTYVY K GGD
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYNKAGGD 156

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BLAST of Csor.00g166110 vs. ExPASy Swiss-Prot
Match: P47905 (Ubiquitin-40S ribosomal protein S27a OS=Lupinus albus OX=3870 PE=3 SV=2)

HSP 1 Score: 295.8 bits (756), Expect = 2.8e-79
Identity = 149/152 (98.03%), Postives = 149/152 (98.03%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHK KKVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDDSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 153
           CPN ECGAGTFMANHFDRHYCGKCG TYVYQK
Sbjct: 121 CPNTECGAGTFMANHFDRHYCGKCGKTYVYQK 152

[Close]

BLAST of Csor.00g166110 vs. ExPASy Swiss-Prot
Match: P59232 (Ubiquitin-40S ribosomal protein S27a-2 OS=Arabidopsis thaliana OX=3702 GN=RPS27AB PE=2 SV=2)

HSP 1 Score: 294.7 bits (753), Expect = 6.3e-79
Identity = 149/154 (96.75%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHK KKVKLAVLQFYKVD SGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPG 155
           CPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK G
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 154

[Close]

BLAST of Csor.00g166110 vs. ExPASy Swiss-Prot
Match: P59233 (Ubiquitin-40S ribosomal protein S27a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS27AC PE=2 SV=2)

HSP 1 Score: 294.3 bits (752), Expect = 8.2e-79
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHK KKVKLAVLQFYK+D SGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPG 155
           CPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK G
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 154

[Close]

BLAST of Csor.00g166110 vs. NCBI nr
Match: XP_022961646.1 (ubiquitin-40S ribosomal protein S27a-like [Cucurbita moschata] >XP_023547140.1 ubiquitin-40S ribosomal protein S27a-like [Cucurbita pepo subsp. pepo] >KAG6598224.1 Ubiquitin-40S ribosomal protein S27a, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 308 bits (789), Expect = 1.27e-105
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156
           CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156

[Close]

BLAST of Csor.00g166110 vs. NCBI nr
Match: XP_004142977.1 (ubiquitin-40S ribosomal protein S27a [Cucumis sativus] >XP_022132060.1 ubiquitin-40S ribosomal protein S27a-like [Momordica charantia] >XP_038884166.1 ubiquitin-40S ribosomal protein S27a-like [Benincasa hispida])

HSP 1 Score: 307 bits (786), Expect = 3.65e-105
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKL+VLQFYKVDDSGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLSVLQFYKVDDSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156
           CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156

[Close]

BLAST of Csor.00g166110 vs. NCBI nr
Match: XP_022997484.1 (ubiquitin-40S ribosomal protein S27a-like [Cucurbita maxima])

HSP 1 Score: 305 bits (782), Expect = 1.49e-104
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP QQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPGQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156
           CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156

[Close]

BLAST of Csor.00g166110 vs. NCBI nr
Match: KAA0061078.1 (ubiquitin-40S ribosomal protein S27a-like [Cucumis melo var. makuwa])

HSP 1 Score: 305 bits (782), Expect = 1.49e-104
Identity = 154/156 (98.72%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKL+VLQFYKVDDSGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLSVLQFYKVDDSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156
           CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156

[Close]

BLAST of Csor.00g166110 vs. NCBI nr
Match: NP_001275598.1 (ubiquitin-40S ribosomal protein S27a-like [Solanum tuberosum] >XP_002297752.1 ubiquitin-40S ribosomal protein S27a [Populus trichocarpa] >XP_002301539.1 ubiquitin-40S ribosomal protein S27a [Populus trichocarpa] >XP_002515213.1 ubiquitin-40S ribosomal protein S27a [Ricinus communis] >XP_004252948.1 ubiquitin-40S ribosomal protein S27a-like [Solanum lycopersicum] >XP_004252949.1 ubiquitin-40S ribosomal protein S27a-like [Solanum lycopersicum] >XP_004252950.1 ubiquitin-40S ribosomal protein S27a-like [Solanum lycopersicum] >XP_006376957.1 ubiquitin-40S ribosomal protein S27a [Populus trichocarpa] >XP_006438329.1 ubiquitin-40S ribosomal protein S27a [Citrus clementina] >XP_006483898.1 ubiquitin-40S ribosomal protein S27a [Citrus sinensis] >XP_007223652.1 ubiquitin-40S ribosomal protein S27a [Prunus persica] >XP_008227802.1 PREDICTED: ubiquitin-40S ribosomal protein S27a [Prunus mume] >XP_009609224.1 ubiquitin-40S ribosomal protein S27a-like [Nicotiana tomentosiformis] >XP_009609225.1 ubiquitin-40S ribosomal protein S27a-like [Nicotiana tomentosiformis] >XP_009609226.1 ubiquitin-40S ribosomal protein S27a-like [Nicotiana tomentosiformis] >XP_009775091.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Nicotiana sylvestris] >XP_009775093.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Nicotiana sylvestris] >XP_010044607.1 ubiquitin-40S ribosomal protein S27a [Eucalyptus grandis] >XP_010999619.1 PREDICTED: ubiquitin-40S ribosomal protein S27a [Populus euphratica] >XP_015060615.1 ubiquitin-40S ribosomal protein S27a-like [Solanum pennellii] >XP_015061699.1 ubiquitin-40S ribosomal protein S27a-like [Solanum pennellii] >XP_015894794.1 ubiquitin-40S ribosomal protein S27a [Ziziphus jujuba] >XP_016494494.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Nicotiana tabacum] >XP_016503872.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Nicotiana tabacum] >XP_016503874.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Nicotiana tabacum] >XP_016503875.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Nicotiana tabacum] >XP_017969957.1 PREDICTED: ubiquitin-40S ribosomal protein S27a [Theobroma cacao] >XP_018812317.1 ubiquitin-40S ribosomal protein S27a [Juglans regia] >XP_018842396.1 ubiquitin-40S ribosomal protein S27a [Juglans regia] >XP_019257468.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Nicotiana attenuata] >XP_019257469.1 PREDICTED: ubiquitin-40S ribosomal protein S27a-like [Nicotiana attenuata] >XP_020414590.1 ubiquitin-40S ribosomal protein S27a [Prunus persica] >XP_021293347.1 ubiquitin-40S ribosomal protein S27a [Herrania umbratica] >XP_021809742.1 ubiquitin-40S ribosomal protein S27a [Prunus avium] >XP_021812743.1 ubiquitin-40S ribosomal protein S27a [Prunus avium] >XP_022723193.1 ubiquitin-40S ribosomal protein S27a [Durio zibethinus] >XP_022733832.1 ubiquitin-40S ribosomal protein S27a [Durio zibethinus] >XP_022775587.1 ubiquitin-40S ribosomal protein S27a [Durio zibethinus] >XP_027115825.1 ubiquitin-40S ribosomal protein S27a [Coffea arabica] >XP_027120956.1 ubiquitin-40S ribosomal protein S27a [Coffea arabica] >XP_027165656.1 ubiquitin-40S ribosomal protein S27a [Coffea eugenioides] >XP_028085467.1 ubiquitin-40S ribosomal protein S27a [Camellia sinensis] >XP_028116092.1 ubiquitin-40S ribosomal protein S27a [Camellia sinensis] >XP_028120479.1 ubiquitin-40S ribosomal protein S27a [Camellia sinensis] >XP_030449349.1 ubiquitin-40S ribosomal protein S27a [Syzygium oleosum] >XP_030513641.1 ubiquitin-40S ribosomal protein S27a [Rhodamnia argentea] >XP_030549468.1 ubiquitin-40S ribosomal protein S27a isoform X2 [Rhodamnia argentea] >XP_031254939.1 ubiquitin-40S ribosomal protein S27a [Pistacia vera] >XP_031277059.1 ubiquitin-40S ribosomal protein S27a [Pistacia vera] >XP_034207278.1 ubiquitin-40S ribosomal protein S27a [Prunus dulcis] >XP_034214284.1 ubiquitin-40S ribosomal protein S27a [Prunus dulcis] >XP_034694200.1 ubiquitin-40S ribosomal protein S27a [Vitis riparia] >XP_034694201.1 ubiquitin-40S ribosomal protein S27a [Vitis riparia] >XP_034887687.1 ubiquitin-40S ribosomal protein S27a [Populus alba] >XP_034906101.1 ubiquitin-40S ribosomal protein S27a isoform X1 [Populus alba] >XP_034906102.1 ubiquitin-40S ribosomal protein S27a isoform X2 [Populus alba] >XP_034908726.1 ubiquitin-40S ribosomal protein S27a [Populus alba] >XP_034930536.1 ubiquitin-40S ribosomal protein S27a [Populus alba] >XP_041003777.1 ubiquitin-40S ribosomal protein S27a [Juglans microcarpa x Juglans regia] >XP_041008635.1 ubiquitin-40S ribosomal protein S27a [Juglans microcarpa x Juglans regia] >XP_042969876.1 ubiquitin-40S ribosomal protein S27a [Carya illinoinensis] >XP_042977479.1 ubiquitin-40S ribosomal protein S27a [Carya illinoinensis] >KAB1209150.1 Ubiquitin-40S ribosomal protein S27a [Morella rubra] >KAF8039758.1 hypothetical protein BT93_B2084 [Corymbia citriodora subsp. variegata] >KAF9671819.1 hypothetical protein SADUNF_Sadunf12G0088200 [Salix dunnii] >KAF9833288.1 hypothetical protein H0E87_002247 [Populus deltoides] >KAG5223315.1 ubiquitin-40S ribosomal protein [Salix suchowensis] >KAG6746286.1 hypothetical protein POTOM_050820 [Populus tomentosa] >KAG9459897.1 hypothetical protein H6P81_004405 [Aristolochia fimbriata] >OMO80139.1 Ubiquitin [Corchorus olitorius] >PSS26875.1 40S ribosomal protein like [Actinidia chinensis var. chinensis] >RVW22011.1 Ubiquitin-40S ribosomal protein S27a [Vitis vinifera] >TMX02614.1 hypothetical protein EJD97_020779 [Solanum chilense] >CAB4264346.1 unnamed protein product [Prunus armeniaca] >CDO98715.1 unnamed protein product [Coffea canephora] >GAY36319.1 hypothetical protein CUMW_021390 [Citrus unshiu] >GFY88270.1 ubiquitin 6 [Actinidia rufa])

HSP 1 Score: 305 bits (781), Expect = 2.11e-104
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156
           CPNAECGAGTFMANHFDRHYCGKCGLTYVYQK GGD
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKAGGD 156

[Close]

BLAST of Csor.00g166110 vs. ExPASy TrEMBL
Match: A0A6J1HAY0 (Ubiquitin OS=Cucurbita moschata OX=3662 GN=LOC111462355 PE=3 SV=1)

HSP 1 Score: 308 bits (789), Expect = 6.16e-106
Identity = 156/156 (100.00%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156
           CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156

[Close]

BLAST of Csor.00g166110 vs. ExPASy TrEMBL
Match: A0A0A0LQL6 (Ubiquitin OS=Cucumis sativus OX=3659 GN=Csa_2G348875 PE=3 SV=1)

HSP 1 Score: 307 bits (786), Expect = 1.77e-105
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKL+VLQFYKVDDSGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLSVLQFYKVDDSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156
           CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156

[Close]

BLAST of Csor.00g166110 vs. ExPASy TrEMBL
Match: A0A6J1BRE2 (Ubiquitin OS=Momordica charantia OX=3673 GN=LOC111005022 PE=3 SV=1)

HSP 1 Score: 307 bits (786), Expect = 1.77e-105
Identity = 155/156 (99.36%), Postives = 156/156 (100.00%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKL+VLQFYKVDDSGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLSVLQFYKVDDSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156
           CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156

[Close]

BLAST of Csor.00g166110 vs. ExPASy TrEMBL
Match: A0A6J1KBF5 (Ubiquitin OS=Cucurbita maxima OX=3661 GN=LOC111492393 PE=3 SV=1)

HSP 1 Score: 305 bits (782), Expect = 7.20e-105
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPP QQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPGQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156
           CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156

[Close]

BLAST of Csor.00g166110 vs. ExPASy TrEMBL
Match: A0A5A7V0J4 (Ubiquitin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002180 PE=3 SV=1)

HSP 1 Score: 305 bits (782), Expect = 7.20e-105
Identity = 154/156 (98.72%), Postives = 155/156 (99.36%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVK KIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKVKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKL+VLQFYKVDDSGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLSVLQFYKVDDSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156
           CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD
Sbjct: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPGGD 156

[Close]

BLAST of Csor.00g166110 vs. TAIR 10
Match: AT2G47110.1 (ubiquitin 6 )

HSP 1 Score: 294.7 bits (753), Expect = 4.5e-80
Identity = 149/154 (96.75%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHK KKVKLAVLQFYKVD SGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPG 155
           CPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK G
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 154

[Close]

BLAST of Csor.00g166110 vs. TAIR 10
Match: AT2G47110.2 (ubiquitin 6 )

HSP 1 Score: 294.7 bits (753), Expect = 4.5e-80
Identity = 149/154 (96.75%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHK KKVKLAVLQFYKVD SGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKVDGSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPG 155
           CPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK G
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 154

[Close]

BLAST of Csor.00g166110 vs. TAIR 10
Match: AT3G62250.1 (ubiquitin 5 )

HSP 1 Score: 294.3 bits (752), Expect = 5.9e-80
Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHK KKVKLAVLQFYK+D SGKVQRLRKE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKHKKVKLAVLQFYKIDGSGKVQRLRKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQKPG 155
           CPNA CGAGTFMA+HFDRHYCGKCGLTYVYQK G
Sbjct: 121 CPNATCGAGTFMASHFDRHYCGKCGLTYVYQKEG 154

[Close]

BLAST of Csor.00g166110 vs. TAIR 10
Match: AT1G23410.1 (Ribosomal protein S27a / Ubiquitin family protein )

HSP 1 Score: 279.3 bits (713), Expect = 1.9e-75
Identity = 140/152 (92.11%), Postives = 145/152 (95.39%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60

Query: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHKKKKVKLAVLQFYKVDDSGKVQRLRKE 120
           IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKH  KKVKLAVLQFYKVD SGKVQRL+KE
Sbjct: 61  IQKESTLHLVLRLRGGAKKRKKKTYTKPKKIKHTHKKVKLAVLQFYKVDGSGKVQRLKKE 120

Query: 121 CPNAECGAGTFMANHFDRHYCGKCGLTYVYQK 153
           CP+  CG GTFMA+HFDRHYCGKCG TYV++K
Sbjct: 121 CPSVSCGPGTFMASHFDRHYCGKCGTTYVFKK 152

[Close]

BLAST of Csor.00g166110 vs. TAIR 10
Match: AT5G03240.1 (polyubiquitin 3 )

HSP 1 Score: 149.8 bits (377), Expect = 1.8e-36
Identity = 76/77 (98.70%), Postives = 77/77 (100.00%), Query Frame = 0


Query: 1   MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 60
           MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN
Sbjct: 229 MQIFVKTLTGKTITLEVESSDTIDNVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLADYN 288

Query: 61  IQKESTLHLVLRLRGGA 78
           IQKESTLHLVLRLRGG+
Sbjct: 289 IQKESTLHLVLRLRGGS 305

The following BLAST results are available for this feature:

BLAST of Csor.00g166110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P62980	3.6e-82	98.08	Ubiquitin-40S ribosomal protein S27a OS=Solanum lycopersicum OX=4081 GN=UBI3 PE=...	[more]
P62981	3.6e-82	98.08	Ubiquitin-40S ribosomal protein S27a OS=Solanum tuberosum OX=4113 GN=UBI3 PE=2 S...	[more]
P47905	2.8e-79	98.03	Ubiquitin-40S ribosomal protein S27a OS=Lupinus albus OX=3870 PE=3 SV=2	[more]
P59232	6.3e-79	96.75	Ubiquitin-40S ribosomal protein S27a-2 OS=Arabidopsis thaliana OX=3702 GN=RPS27A...	[more]
P59233	8.2e-79	96.10	Ubiquitin-40S ribosomal protein S27a-3 OS=Arabidopsis thaliana OX=3702 GN=RPS27A...	[more]

BLAST of Csor.00g166110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022961646.1	1.27e-105	100.00	ubiquitin-40S ribosomal protein S27a-like [Cucurbita moschata] >XP_023547140.1 u...	[more]
XP_004142977.1	3.65e-105	99.36	ubiquitin-40S ribosomal protein S27a [Cucumis sativus] >XP_022132060.1 ubiquitin...	[more]
XP_022997484.1	1.49e-104	99.36	ubiquitin-40S ribosomal protein S27a-like [Cucurbita maxima]	[more]
KAA0061078.1	1.49e-104	98.72	ubiquitin-40S ribosomal protein S27a-like [Cucumis melo var. makuwa]	[more]
NP_001275598.1	2.11e-104	99.36	ubiquitin-40S ribosomal protein S27a-like [Solanum tuberosum] >XP_002297752.1 ub...	[more]

BLAST of Csor.00g166110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HAY0	6.16e-106	100.00	Ubiquitin OS=Cucurbita moschata OX=3662 GN=LOC111462355 PE=3 SV=1	[more]
A0A0A0LQL6	1.77e-105	99.36	Ubiquitin OS=Cucumis sativus OX=3659 GN=Csa_2G348875 PE=3 SV=1	[more]
A0A6J1BRE2	1.77e-105	99.36	Ubiquitin OS=Momordica charantia OX=3673 GN=LOC111005022 PE=3 SV=1	[more]
A0A6J1KBF5	7.20e-105	99.36	Ubiquitin OS=Cucurbita maxima OX=3661 GN=LOC111492393 PE=3 SV=1	[more]
A0A5A7V0J4	7.20e-105	98.72	Ubiquitin OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G002180 PE=...	[more]

BLAST of Csor.00g166110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G47110.1	4.5e-80	96.75	ubiquitin 6	[more]
AT2G47110.2	4.5e-80	96.75	ubiquitin 6	[more]
AT3G62250.1	5.9e-80	96.10	ubiquitin 5	[more]
AT1G23410.1	1.9e-75	92.11	Ribosomal protein S27a / Ubiquitin family protein	[more]
AT5G03240.1	1.8e-36	98.70	polyubiquitin 3	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR019956	Ubiquitin domain	PRINTS	PR00348	UBIQUITIN	coord: 11..31 score: 85.2 coord: 53..74 score: 91.18 coord: 32..52 score: 95.05
IPR000626	Ubiquitin-like domain	SMART	SM00213	ubq_7	coord: 1..72 e-value: 3.0E-35 score: 133.1
IPR000626	Ubiquitin-like domain	PFAM	PF00240	ubiquitin	coord: 3..74 e-value: 6.0E-34 score: 115.6
IPR000626	Ubiquitin-like domain	PROSITE	PS50053	UBIQUITIN_2	coord: 1..76 score: 30.452106
IPR002906	Ribosomal protein S27a	SMART	SM01402	Ribosomal_S27_2	coord: 102..147 e-value: 3.1E-28 score: 109.8
IPR002906	Ribosomal protein S27a	PFAM	PF01599	Ribosomal_S27	coord: 102..147 e-value: 1.7E-26 score: 91.9
None	No IPR available	GENE3D	3.10.20.90		coord: 1..80 e-value: 5.6E-46 score: 156.3
None	No IPR available	PANTHER	PTHR10666:SF363	UBIQUITIN-40S RIBOSOMAL PROTEIN S27A-1	coord: 1..146
None	No IPR available	PANTHER	PTHR10666	UBIQUITIN	coord: 1..146
None	No IPR available	CDD	cd01803	Ubl_ubiquitin	coord: 1..76 e-value: 8.56188E-55 score: 165.31
IPR038582	S27a-like superfamily	GENE3D	6.20.50.150		coord: 81..155 e-value: 2.2E-40 score: 138.9
IPR019954	Ubiquitin conserved site	PROSITE	PS00299	UBIQUITIN_1	coord: 27..52
IPR029071	Ubiquitin-like domain superfamily	SUPERFAMILY	54236	Ubiquitin-like	coord: 1..93
IPR011332	Zinc-binding ribosomal protein	SUPERFAMILY	57829	Zn-binding ribosomal proteins	coord: 100..152

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g166110.m01	Csor.00g166110.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0019941	modification-dependent protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006412	translation
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005634	nucleus
cellular_component	GO:0005840	ribosome
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0031386	protein tag
molecular_function	GO:0003735	structural constituent of ribosome
molecular_function	GO:0031625	ubiquitin protein ligase binding
molecular_function	GO:0005515	protein binding