Csor.00g163240 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g163240
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	leucine-rich repeat extensin-like protein 3 isoform X1
Location	Csor_Chr13: 6653082 .. 6654070 (+)
RNA-Seq Expression	Csor.00g163240
Synteny	Csor.00g163240

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGACGCCAAGGTCATTTCTCTCTGTTTTTGGTTTGGTTTTTGAGTTTCTTGTCTCTGTTTTGCTGATTCTGAGTGACTTTAATTGTTTATGCAGAAGACTGTGGTTATGATGCTTAAAGTGGATTTGCAGTGTGATCGATGCTACAAGAAAGTGAAGAAAGTTCTCTGCAAATTTCCTCGTCAGTTCTTTCTCCATTTCTACTGTTCTTCTGTTCTTTACTCTGTTTTTCCAAATTGATTTTGATTCTTTGAACGCCAGAAATTCGAGACCAGATTTATGATGAGAAACAGAATCTTGTGATTATCAAAGTGGTTTGCTGTAATCCTGAGAAGCTTAGAGATAAAATTTGTTGTAAGGGCTGTGGTGTTATTAAGAGCATTGAAATCAAGCCCGCCGATCCTCCTCCGCCCAAAAAGCCCGATCCTCCTCCGCCCAAAAAAGCCGATCCTCCTCCGCCCAAAAAAGCCGATCCTCCTCCGCCGGCTAAGCCTGACCCTCCTCCCCCTAAAAAAGCCGACCCACCACCGCCCAAGGCCGACCCTCCGCCACCGAAAAAGGCCGACCCACCACCACCGAAAAAGGCCGACCCACCGCCTCCCAAGGCCGACCCTCCCCCACCCAAAAAGGCCGACCCACCGCCGCCCAAAAAGGCCGACCCACCCCCGGCACCCAAGGCCGACCCACCGCCTCCGAAAAAGGTAGACCCTGTGCCACCGGCTCAACCCGAACCGTTCCCGGTTAACATATGCGTGCCGGTTCCCGGATACCCACCGGCTTACCCGATTGGGATGTGCTGTAGTCAGTGCTATGAAGGGCAGGGTGGGGGCCCATGTTACAGTGGGTTTGGTAGGCCCGGCCCATGTTGCGATGGGTGCGCTTCTGGAAGGCCCATTTACGACAGTTACGGCGGAGGGAGGCCCTGTTATGTTAGCCACTGTGAATACCTCAACGAAGAAAATGCATCCGGGTGCAGTGTTATGTGA

mRNA sequence

ATGGCGGACGCCAAGAAGACTGTGGTTATGATGCTTAAAGTGGATTTGCAGTGTGATCGATGCTACAAGAAAGTGAAGAAAGTTCTCTGCAAATTTCCTCAAATTCGAGACCAGATTTATGATGAGAAACAGAATCTTGTGATTATCAAAGTGGTTTGCTGTAATCCTGAGAAGCTTAGAGATAAAATTTGTTGTAAGGGCTGTGGTGTTATTAAGAGCATTGAAATCAAGCCCGCCGATCCTCCTCCGCCCAAAAAGCCCGATCCTCCTCCGCCCAAAAAAGCCGATCCTCCTCCGCCCAAAAAAGCCGATCCTCCTCCGCCGGCTAAGCCTGACCCTCCTCCCCCTAAAAAAGCCGACCCACCACCGCCCAAGGCCGACCCTCCGCCACCGAAAAAGGCCGACCCACCACCACCGAAAAAGGCCGACCCACCGCCTCCCAAGGCCGACCCTCCCCCACCCAAAAAGGCCGACCCACCGCCGCCCAAAAAGGCCGACCCACCCCCGGCACCCAAGGCCGACCCACCGCCTCCGAAAAAGGTAGACCCTGTGCCACCGGCTCAACCCGAACCGTTCCCGGTTAACATATGCGTGCCGGTTCCCGGATACCCACCGGCTTACCCGATTGGGATGTGCTGTAGTCAGTGCTATGAAGGGCAGGGTGGGGGCCCATGTTACAGTGGGTTTGGTAGGCCCGGCCCATGTTGCGATGGGTGCGCTTCTGGAAGGCCCATTTACGACAGTTACGGCGGAGGGAGGCCCTGTTATGTTAGCCACTGTGAATACCTCAACGAAGAAAATGCATCCGGGTGCAGTGTTATGTGA

Coding sequence (CDS)

ATGGCGGACGCCAAGAAGACTGTGGTTATGATGCTTAAAGTGGATTTGCAGTGTGATCGATGCTACAAGAAAGTGAAGAAAGTTCTCTGCAAATTTCCTCAAATTCGAGACCAGATTTATGATGAGAAACAGAATCTTGTGATTATCAAAGTGGTTTGCTGTAATCCTGAGAAGCTTAGAGATAAAATTTGTTGTAAGGGCTGTGGTGTTATTAAGAGCATTGAAATCAAGCCCGCCGATCCTCCTCCGCCCAAAAAGCCCGATCCTCCTCCGCCCAAAAAAGCCGATCCTCCTCCGCCCAAAAAAGCCGATCCTCCTCCGCCGGCTAAGCCTGACCCTCCTCCCCCTAAAAAAGCCGACCCACCACCGCCCAAGGCCGACCCTCCGCCACCGAAAAAGGCCGACCCACCACCACCGAAAAAGGCCGACCCACCGCCTCCCAAGGCCGACCCTCCCCCACCCAAAAAGGCCGACCCACCGCCGCCCAAAAAGGCCGACCCACCCCCGGCACCCAAGGCCGACCCACCGCCTCCGAAAAAGGTAGACCCTGTGCCACCGGCTCAACCCGAACCGTTCCCGGTTAACATATGCGTGCCGGTTCCCGGATACCCACCGGCTTACCCGATTGGGATGTGCTGTAGTCAGTGCTATGAAGGGCAGGGTGGGGGCCCATGTTACAGTGGGTTTGGTAGGCCCGGCCCATGTTGCGATGGGTGCGCTTCTGGAAGGCCCATTTACGACAGTTACGGCGGAGGGAGGCCCTGTTATGTTAGCCACTGTGAATACCTCAACGAAGAAAATGCATCCGGGTGCAGTGTTATGTGA

Protein sequence

MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM

Homology

[Close]

BLAST of Csor.00g163240 vs. ExPASy Swiss-Prot
Match: P23093 (Circumsporozoite protein OS=Plasmodium berghei (strain Anka) OX=5823 PE=3 SV=1)

HSP 1 Score: 51.2 bits (121), Expect = 2.1e-05
Identity = 74/135 (54.81%), Postives = 75/135 (55.56%), Query Frame = 0


Query: 78  PADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPKKADPPPPKA-DPPPPKKADP 137
           P DPPPP   DPPPP   DPPPP   DPPPP   DPPPP   DPPPP A DP PP   DP
Sbjct: 98  PNDPPPPNPNDPPPPNPNDPPPPNPNDPPPPNPNDPPPPNANDPPPPNANDPAPPNANDP 157

Query: 138 PPPKKADPPPPKA-DPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPP-----AQPE 197
            PP   DP PP A DPPPP   DPPPP   DP P    DPPPP   DP PP      QP+
Sbjct: 158 APPNANDPAPPNANDPPPPNANDPPPPNPNDPAPPNANDPPPPNPNDPAPPQGNNNPQPQ 217

Query: 198 PFPVNICVPVPGYPP 206
           P P     P P   P
Sbjct: 218 PRPQPQPQPQPQPQP 232

[Close]

BLAST of Csor.00g163240 vs. NCBI nr
Match: KAG6583723.1 (hypothetical protein SDJN03_19655, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 504 bits (1297), Expect = 3.72e-179
Identity = 274/274 (100.00%), Postives = 274/274 (100.00%), Query Frame = 0


Query: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPKKAD 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPKKAD
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPKKAD 120

Query: 121 PPPPKADPPPPKKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPAPKADPPPPKK 180
           PPPPKADPPPPKKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPAPKADPPPPKK
Sbjct: 121 PPPPKADPPPPKKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPAPKADPPPPKK 180

Query: 181 VDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCA 240
           VDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCA
Sbjct: 181 VDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCA 240

Query: 241 SGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 274
           SGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 SGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 274

[Close]

BLAST of Csor.00g163240 vs. NCBI nr
Match: XP_022927597.1 (leucine-rich repeat extensin-like protein 3 isoform X11 [Cucurbita moschata])

HSP 1 Score: 480 bits (1235), Expect = 1.01e-169
Identity = 266/281 (94.66%), Postives = 266/281 (94.66%), Query Frame = 0


Query: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPKKAD 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP        AKPDPPPPKKAD
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP--------AKPDPPPPKKAD 120

Query: 121 PPPPKADPPPPKKADPPPPK-------KADPPPPKADPPPPKKADPPPPKKADPPPAPKA 180
           PPPPKADPPPPKKADPPPPK       KADPPPPKADPPPPKKADPPPPKKADPPPAPKA
Sbjct: 121 PPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPAPKA 180

Query: 181 DPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPG 240
           DPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPG
Sbjct: 181 DPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPG 240

Query: 241 PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 274
           PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 273

[Close]

BLAST of Csor.00g163240 vs. NCBI nr
Match: XP_022927594.1 (leucine-rich repeat extensin-like protein 3 isoform X9 [Cucurbita moschata])

HSP 1 Score: 476 bits (1225), Expect = 6.01e-168
Identity = 270/289 (93.43%), Postives = 270/289 (93.43%), Query Frame = 0


Query: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPK--- 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP K DPPPP K DPPPPK   
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADP 120

Query: 121 ----KADPPPPKADPPPPKKADPPPPK-------KADPPPPK-ADPPPPKKADPPPPKKA 180
               KADPPPPKADPPPPKKADPPPPK       KADPPPPK ADPPPPKKADPPPPKKA
Sbjct: 121 PPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPPKKADPPPPKKA 180

Query: 181 DPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPC 240
           DPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPC
Sbjct: 181 DPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPC 240

Query: 241 YSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 274
           YSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 YSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 289

[Close]

BLAST of Csor.00g163240 vs. NCBI nr
Match: XP_022927595.1 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X10 [Cucurbita moschata])

HSP 1 Score: 475 bits (1223), Expect = 7.04e-168
Identity = 266/282 (94.33%), Postives = 266/282 (94.33%), Query Frame = 0


Query: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPKKAD 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP        AKPDPPPPKKAD
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP--------AKPDPPPPKKAD 120

Query: 121 PPPPKADPPPPKKADPPPPK-------KADPPPPK-ADPPPPKKADPPPPKKADPPPAPK 180
           PPPPKADPPPPKKADPPPPK       KADPPPPK ADPPPPKKADPPPPKKADPPPAPK
Sbjct: 121 PPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPPKKADPPPPKKADPPPAPK 180

Query: 181 ADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRP 240
           ADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRP
Sbjct: 181 ADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRP 240

Query: 241 GPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 274
           GPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 GPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 274

[Close]

BLAST of Csor.00g163240 vs. NCBI nr
Match: XP_022927591.1 (leucine-rich repeat extensin-like protein 3 isoform X6 [Cucurbita moschata])

HSP 1 Score: 475 bits (1222), Expect = 2.86e-167
Identity = 270/303 (89.11%), Postives = 270/303 (89.11%), Query Frame = 0


Query: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPK--- 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP K DPPPP K DPPPPK   
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADP 120

Query: 121 -------------------KADPPPPKADPPPPKKADPPPPK-------KADPPPPKADP 180
                              KADPPPPKADPPPPKKADPPPPK       KADPPPPKADP
Sbjct: 121 PPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADP 180

Query: 181 PPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGM 240
           PPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGM
Sbjct: 181 PPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGM 240

Query: 241 CCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC 274
           CCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC
Sbjct: 241 CCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC 300

[Close]

BLAST of Csor.00g163240 vs. ExPASy TrEMBL
Match: A0A6J1EHM2 (leucine-rich repeat extensin-like protein 3 isoform X11 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 480 bits (1235), Expect = 4.88e-170
Identity = 266/281 (94.66%), Postives = 266/281 (94.66%), Query Frame = 0


Query: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPKKAD 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP        AKPDPPPPKKAD
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP--------AKPDPPPPKKAD 120

Query: 121 PPPPKADPPPPKKADPPPPK-------KADPPPPKADPPPPKKADPPPPKKADPPPAPKA 180
           PPPPKADPPPPKKADPPPPK       KADPPPPKADPPPPKKADPPPPKKADPPPAPKA
Sbjct: 121 PPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPAPKA 180

Query: 181 DPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPG 240
           DPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPG
Sbjct: 181 DPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPG 240

Query: 241 PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 274
           PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 PCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 273

[Close]

BLAST of Csor.00g163240 vs. ExPASy TrEMBL
Match: A0A6J1EIF7 (leucine-rich repeat extensin-like protein 3 isoform X9 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 476 bits (1225), Expect = 2.91e-168
Identity = 270/289 (93.43%), Postives = 270/289 (93.43%), Query Frame = 0


Query: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPK--- 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP K DPPPP K DPPPPK   
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADP 120

Query: 121 ----KADPPPPKADPPPPKKADPPPPK-------KADPPPPK-ADPPPPKKADPPPPKKA 180
               KADPPPPKADPPPPKKADPPPPK       KADPPPPK ADPPPPKKADPPPPKKA
Sbjct: 121 PPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPPKKADPPPPKKA 180

Query: 181 DPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPC 240
           DPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPC
Sbjct: 181 DPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPC 240

Query: 241 YSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 274
           YSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 YSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 289

[Close]

BLAST of Csor.00g163240 vs. ExPASy TrEMBL
Match: A0A6J1EPF0 (protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X10 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 475 bits (1223), Expect = 3.41e-168
Identity = 266/282 (94.33%), Postives = 266/282 (94.33%), Query Frame = 0


Query: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPKKAD 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP        AKPDPPPPKKAD
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP--------AKPDPPPPKKAD 120

Query: 121 PPPPKADPPPPKKADPPPPK-------KADPPPPK-ADPPPPKKADPPPPKKADPPPAPK 180
           PPPPKADPPPPKKADPPPPK       KADPPPPK ADPPPPKKADPPPPKKADPPPAPK
Sbjct: 121 PPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKKADPPPPKKADPPPPKKADPPPAPK 180

Query: 181 ADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRP 240
           ADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRP
Sbjct: 181 ADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRP 240

Query: 241 GPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 274
           GPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM
Sbjct: 241 GPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGCSVM 274

[Close]

BLAST of Csor.00g163240 vs. ExPASy TrEMBL
Match: A0A6J1EI38 (leucine-rich repeat extensin-like protein 3 isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 475 bits (1222), Expect = 1.38e-167
Identity = 270/303 (89.11%), Postives = 270/303 (89.11%), Query Frame = 0


Query: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPK--- 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP K DPPPP K DPPPPK   
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADP 120

Query: 121 -------------------KADPPPPKADPPPPKKADPPPPK-------KADPPPPKADP 180
                              KADPPPPKADPPPPKKADPPPPK       KADPPPPKADP
Sbjct: 121 PPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKADPPPPKADP 180

Query: 181 PPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGM 240
           PPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGM
Sbjct: 181 PPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGM 240

Query: 241 CCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC 274
           CCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC
Sbjct: 241 CCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASGC 300

[Close]

BLAST of Csor.00g163240 vs. ExPASy TrEMBL
Match: A0A6J1EPE4 (leucine-rich repeat extensin-like protein 3 isoform X5 OS=Cucurbita moschata OX=3662 GN=LOC111434373 PE=4 SV=1)

HSP 1 Score: 474 bits (1221), Expect = 2.04e-167
Identity = 270/304 (88.82%), Postives = 270/304 (88.82%), Query Frame = 0


Query: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60
           MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR
Sbjct: 1   MADAKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLR 60

Query: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPK--- 120
           DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPP K DPPPP K DPPPPK   
Sbjct: 61  DKICCKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPAKPDPPPPKKADPPPPKADP 120

Query: 121 ----KADPPPPKADPPPPKKADPPPPKKADPPPPKADPPPPKKADPPPPK---------- 180
               KADPPPPKADPPPPKKADPPPPKKADPPPPKADPPPPKKADPPPPK          
Sbjct: 121 PPPKKADPPPPKADPPPPKKADPPPPKKADPPPPKADPPPPKKADPPPPKADPPPPKKAD 180

Query: 181 -------------KADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIG 240
                        KADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIG
Sbjct: 181 PPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIG 240

Query: 241 MCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASG 274
           MCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASG
Sbjct: 241 MCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGGRPCYVSHCEYLNEENASG 300

[Close]

BLAST of Csor.00g163240 vs. TAIR 10
Match: AT4G16380.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 2.8e-29
Identity = 122/279 (43.73%), Postives = 156/279 (55.91%), Query Frame = 0


Query: 5   KKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKIC 64
           +K  +M LKVDL C +CYKKVKKVLCKFPQIRDQ++DEK N+VIIKVVCC+PE++ DK+C
Sbjct: 7   EKVTMMKLKVDLDCAKCYKKVKKVLCKFPQIRDQLFDEKSNIVIIKVVCCSPERIMDKLC 66

Query: 65  CKGCGVIKSIEIKPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPKKADPPPP 124
            KG G IK+IEI   +PP P +P P  P    P  PK A P  P K  P  P+K   P  
Sbjct: 67  SKGGGSIKTIEI--VEPPKPPQPQPQQP----PQKPKDAQPKAPEK--PKEPEKPKQPEK 126

Query: 125 KADPPPPKKAD-PPPPKKADPPPPKADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDP 184
             +P  PK+ + P  P+K   P P   P P   A P P     P PAPK   PPP+ +  
Sbjct: 127 LKEPEKPKQPEKPKEPEKTKQPAPAPAPAPAPAAKPAPAPAPAPAPAPKQPGPPPQAIPM 186

Query: 185 VPPAQPEPFPVNICVPVPGYPPAYPIGMCCSQCYEGQGGGPCYSGFGRPGPCCDGCASGR 244
           +P  QP                     MCC   Y+G  GGP ++G+G P    +    GR
Sbjct: 187 MPQGQP--------------------AMCCGPYYDGY-GGPAFNGYGMPPQPYE--CYGR 246

Query: 245 PIYDSYGGG--------RPCYVSHCEYLNEENASGCSVM 275
           P+Y+S+GGG        R C+V+ C+Y +EEN   CS+M
Sbjct: 247 PVYESWGGGCPPPPPAYRQCHVTRCDYFSEENPQSCSIM 254

[Close]

BLAST of Csor.00g163240 vs. TAIR 10
Match: AT4G16380.2 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.6e-16
Identity = 100/250 (40.00%), Postives = 132/250 (52.80%), Query Frame = 0


Query: 34  QIRDQIYDEKQNLVIIKVVCCNPEKLRDKICCKGCGVIKSIEIKPADPPPPKKPDPPPPK 93
           +IRDQ++DEK N+VIIKVVCC+PE++ DK+C KG G IK+IEI   +PP P +P P  P 
Sbjct: 15  EIRDQLFDEKSNIVIIKVVCCSPERIMDKLCSKGGGSIKTIEI--VEPPKPPQPQPQQP- 74

Query: 94  KADPPPPKKADPPPPAKPDPPPPKKADPPPPKADPPPPKKAD-PPPPKKADPPPPKADPP 153
              P  PK A P  P K  P  P+K   P    +P  PK+ + P  P+K   P P   P 
Sbjct: 75  ---PQKPKDAQPKAPEK--PKEPEKPKQPEKLKEPEKPKQPEKPKEPEKTKQPAPAPAPA 134

Query: 154 PPKKADPPPPKKADPPPAPKADPPPPKKVDPVPPAQPEPFPVNICVPVPGYPPAYPIGMC 213
           P   A P P     P PAPK   PPP+ +  +P  QP                     MC
Sbjct: 135 PAPAAKPAPAPAPAPAPAPKQPGPPPQAIPMMPQGQP--------------------AMC 194

Query: 214 CSQCYEGQGGGPCYSGFGRPGPCCDGCASGRPIYDSYGGG--------RPCYVSHCEYLN 273
           C   Y+G  GGP ++G+G P    +    GRP+Y+S+GGG        R C+V+ C+Y +
Sbjct: 195 CGPYYDGY-GGPAFNGYGMPPQPYE--CYGRPVYESWGGGCPPPPPAYRQCHVTRCDYFS 233

Query: 274 EENASGCSVM 275
           EEN   CS+M
Sbjct: 255 EENPQSCSIM 233

[Close]

BLAST of Csor.00g163240 vs. TAIR 10
Match: AT1G51090.1 (Heavy metal transport/detoxification superfamily protein )

HSP 1 Score: 77.4 bits (189), Expect = 2.0e-14
Identity = 66/130 (50.77%), Postives = 83/130 (63.85%), Query Frame = 0


Query: 4   AKKTVVMMLKVDLQCDRCYKKVKKVLCKFPQIRDQIYDEKQNLVIIKVVCCNPEKLRDKI 63
           A+K V+M LKVDL C +CYKKVKK + KFPQI D+++DEK N +IIKVVC +PE+L +K+
Sbjct: 2   AEKVVMMKLKVDLNCSKCYKKVKKAIRKFPQITDELFDEKSNTIIIKVVCYDPERLMNKL 61

Query: 64  CCKGCGVIKSIEIKPADPPPPKKPDPPPPKK--ADPPPPKKADPPPPAKPDPPP---PKK 123
           C KG G IKSI I   +PP P +P P PP+K  A  P P +A  P   +P P P      
Sbjct: 62  CYKGDGSIKSIVI--LEPPKPPQPQPQPPQKPTAPAPAPAQAQAPALVRPAPVPVLVSSS 121

Query: 124 ADPPPPKADP 129
           A  P P   P
Sbjct: 122 APQPMPMWQP 129

[Close]

BLAST of Csor.00g163240 vs. TAIR 10
Match: AT1G44191.1 (ECA1 gametogenesis related family protein )

HSP 1 Score: 43.5 bits (101), Expect = 3.2e-04
Identity = 66/120 (55.00%), Postives = 73/120 (60.83%), Query Frame = 0


Query: 77  KPADPPPPKKPDPPPPKKADPPPPKKADPPPPAKPDPPPPKKADPPPPKADPPPPKKADP 136
           KP+ PPP  K  PPPPK + PPP  K  PPPP    PPP  K  PPPPK  P PPK + P
Sbjct: 121 KPSSPPPIPKKSPPPPKPSSPPPTPKKSPPPPKPSSPPPSPKKSPPPPKPSPSPPKPSTP 180

Query: 137 PP-PKKADPPPPK-ADPPPPKKADPPPPKKADPPPAPKADPPPPKKVDPVP-PAQPEPFP 194
           PP PKK+ P PPK + PPP  K  PPPPK +  PP P   PP PKK  P P P+QP P P
Sbjct: 181 PPTPKKSPPSPPKPSSPPPSPKKSPPPPKPSPSPPKPSTPPPTPKKSPPPPKPSQPPPKP 240

The following BLAST results are available for this feature:

BLAST of Csor.00g163240 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P23093	2.1e-05	54.81	Circumsporozoite protein OS=Plasmodium berghei (strain Anka) OX=5823 PE=3 SV=1	[more]

BLAST of Csor.00g163240 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6583723.1	3.72e-179	100.00	hypothetical protein SDJN03_19655, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022927597.1	1.01e-169	94.66	leucine-rich repeat extensin-like protein 3 isoform X11 [Cucurbita moschata]	[more]
XP_022927594.1	6.01e-168	93.43	leucine-rich repeat extensin-like protein 3 isoform X9 [Cucurbita moschata]	[more]
XP_022927595.1	7.04e-168	94.33	protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X10 [Cucurbita moschata]	[more]
XP_022927591.1	2.86e-167	89.11	leucine-rich repeat extensin-like protein 3 isoform X6 [Cucurbita moschata]	[more]

BLAST of Csor.00g163240 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EHM2	4.88e-170	94.66	leucine-rich repeat extensin-like protein 3 isoform X11 OS=Cucurbita moschata OX...	[more]
A0A6J1EIF7	2.91e-168	93.43	leucine-rich repeat extensin-like protein 3 isoform X9 OS=Cucurbita moschata OX=...	[more]
A0A6J1EPF0	3.41e-168	94.33	protein PYRICULARIA ORYZAE RESISTANCE 21-like isoform X10 OS=Cucurbita moschata ...	[more]
A0A6J1EI38	1.38e-167	89.11	leucine-rich repeat extensin-like protein 3 isoform X6 OS=Cucurbita moschata OX=...	[more]
A0A6J1EPE4	2.04e-167	88.82	leucine-rich repeat extensin-like protein 3 isoform X5 OS=Cucurbita moschata OX=...	[more]

BLAST of Csor.00g163240 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G16380.1	2.8e-29	43.73	Heavy metal transport/detoxification superfamily protein	[more]
AT4G16380.2	3.6e-16	40.00	Heavy metal transport/detoxification superfamily protein	[more]
AT1G51090.1	2.0e-14	50.77	Heavy metal transport/detoxification superfamily protein	[more]
AT1G44191.1	3.2e-04	55.00	ECA1 gametogenesis related family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 79..100
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 101..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 163..187
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 140..156
None	No IPR available	PANTHER	PTHR47488:SF16	HEAVY-METAL-ASSOCIATED DOMAIN PROTEIN	coord: 4..274
IPR044169	Protein PYRICULARIA ORYZAE RESISTANCE 21	PANTHER	PTHR47488	HEAVY METAL TRANSPORT/DETOXIFICATION SUPERFAMILY PROTEIN	coord: 4..274
IPR036163	Heavy metal-associated domain superfamily	SUPERFAMILY	55008	HMA, heavy metal-associated domain	coord: 9..70

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g163240.m01	Csor.00g163240.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1900150	regulation of defense response to fungus
molecular_function	GO:0046872	metal ion binding