Csor.00g159290 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g159290
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr10: 7844466 .. 7845946 (+)
RNA-Seq ExpressionCsor.00g159290
SyntenyCsor.00g159290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAACCTATCAAATCTGACCCTATACACTAGTCCTCTCCTTTACAGAGTCTCAATATACACTCTTCCGCGAATAGCAGGAATTCAAGGGGATGTAACACAACTTACTGGAAAAGAGGCTAGTACTTATACTTACGAATCCTACCTACCCCCACAATACAATTTCTCAAAAGCTCAAATAGCCAAACCTCGTATGGAAACCTTACTGCTAGGGATACCGCCCACTCTTGGAAAGATCGTATACCAATCTATTCTCTCGCTCTATGGAAAGAAGGAAGTTAACTTACAGGCTCATCTAGATGAGGACGGGAAGGGAAGGTGGAATCTGTCCCTGATCAGAAAAGAGCACGAGGGTAGGAAAGTCACTCTCAGTCTCGTGGCTATAAGACCAACCGATCCGCTCCAGGTAAGATGACATGGATCTGAACACCTTGGTGGGATAAGAGAGTTGGAACTGTTATCAGGGTCTCCGTTTACATGATCAGTAAGAAATCATAGAAAAGATGAAAGAATGAATTGGAGTCTTATGTCCAACAGCGAACCAATGCCTTTCCTTTACCCATTTTGACTCGGTAAACCTTTCTATTAAAAGACATTCTTCCCTATTTGATATGTCTGGTAAGGCGCATTCAGTTGAGGGATAAAAACCTACCGGGAAACTCCTTGATTTCATCGATCATCTCATTGCCTCATGATTTCTGTCCAATGCTGTATTTCGACTACATTTCGCTACGCAATCCTAGCGCTAACTCAAGAAATATATAAAGCAAAGGGATGAATTGCTCTTTCTCCTCCTTTATATTCCCAGGAACACAAACAAAGAATTCCATTGCCTTCCTTTTTCACTGGTTAATTTTGTCAATTCTCTTTCTTTCTTACCTCGTTGATTGACTTTTGGCGATGTTATTTATACTCTTTCTAGAAGAGAAGACAGTGGTCGATAGCTTCCTTCTTTGATGAGGCAGACCATTGAATGTTCTTGCCATAGTTAATGTATGGTCTCTTGTCTCGATGAGGGCTGGTGTGCTATAATACTAGCAGCTCTCGGGTCTACTATCCCTTCTACTACCTACAGCCTTTAATAAAGAAGAAAGTCAGAAAGGCCTGGTTTCGTCTGGTAAGCTCTCCATATAGAACTTATATATCTGCTGTTAGCGCTTTCGTTTGGTTTTCTTTTCCATTCAATCCTTTTCGAGCTTTATTGGTCTAGTTTCAGTCAATGCCCTGTAAAGTAATAAAGTCAAGAAAATGGCAATAATCAATCATCTGATAGATGTCCTGATTCTACTGCGGATAAGAATCAATCCTTTTTCTGCTGCGTGGATCCTTTATCAGTCCGGGATGGCATCCTTTAAAGTTGAAAGTCAAGTAATTGGTTCATGGGAACTGGCTGGACAATCAAAGGTTGGGATATCTCATTTGATCTCAGCAAACCGCTTCGCGCTCAAAGAGAAAGTCATATCTTTAAGTTTAAGCTAG

mRNA sequence

ATGGGGAACCTATCAAATCTGACCCTATACACTAGTCCTCTCCTTTACAGAGTCTCAATATACACTCTTCCGCGAATAGCAGGAATTCAAGGGGATGTAACACAACTTACTGGAAAAGAGGCTAGTACTTATACTTACGAATCCTACCTACCCCCACAATACAATTTCTCAAAAGCTCAAATAGCCAAACCTCGTATGGAAACCTTACTGCTAGGGATACCGCCCACTCTTGGAAAGATCGTATACCAATCTATTCTCTCGCTCTATGGAAAGAAGGAAGTTAACTTACAGGCTCATCTAGATGAGGACGGGAAGGGAAGGTGGAATCTGTCCCTGATCAGAAAAGAGCACGAGGGTAGGAAAGTCACTCTCAGTCTCGTGGCTATAAGACCAACCGATCCGCTCCAGTCCGGGATGGCATCCTTTAAAGTTGAAAGTCAAGTAATTGGTTCATGGGAACTGGCTGGACAATCAAAGGTTGGGATATCTCATTTGATCTCAGCAAACCGCTTCGCGCTCAAAGAGAAAGTCATATCTTTAAGTTTAAGCTAG

Coding sequence (CDS)

ATGGGGAACCTATCAAATCTGACCCTATACACTAGTCCTCTCCTTTACAGAGTCTCAATATACACTCTTCCGCGAATAGCAGGAATTCAAGGGGATGTAACACAACTTACTGGAAAAGAGGCTAGTACTTATACTTACGAATCCTACCTACCCCCACAATACAATTTCTCAAAAGCTCAAATAGCCAAACCTCGTATGGAAACCTTACTGCTAGGGATACCGCCCACTCTTGGAAAGATCGTATACCAATCTATTCTCTCGCTCTATGGAAAGAAGGAAGTTAACTTACAGGCTCATCTAGATGAGGACGGGAAGGGAAGGTGGAATCTGTCCCTGATCAGAAAAGAGCACGAGGGTAGGAAAGTCACTCTCAGTCTCGTGGCTATAAGACCAACCGATCCGCTCCAGTCCGGGATGGCATCCTTTAAAGTTGAAAGTCAAGTAATTGGTTCATGGGAACTGGCTGGACAATCAAAGGTTGGGATATCTCATTTGATCTCAGCAAACCGCTTCGCGCTCAAAGAGAAAGTCATATCTTTAAGTTTAAGCTAG

Protein sequence

MGNLSNLTLYTSPLLYRVSIYTLPRIAGIQGDVTQLTGKEASTYTYESYLPPQYNFSKAQIAKPRMETLLLGIPPTLGKIVYQSILSLYGKKEVNLQAHLDEDGKGRWNLSLIRKEHEGRKVTLSLVAIRPTDPLQSGMASFKVESQVIGSWELAGQSKVGISHLISANRFALKEKVISLSLS
Homology
[Close]
BLAST of Csor.00g159290 vs. NCBI nr
Match: KAG6585990.1 (hypothetical protein SDJN03_18723, partial [Cucurbita argyrosperma subsp. sororia] >KAG6590346.1 hypothetical protein SDJN03_15769, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 357 bits (917), Expect = 2.98e-124
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0 

Query: 1   MGNLSNLTLYTSPLLYRVSIYTLPRIAGIQGDVTQLTGKEASTYTYESYLPPQYNFSKAQ 60
           MGNLSNLTLYTSPLLYRVSIYTLPRIAGIQGDVTQLTGKEASTYTYESYLPPQYNFSKAQ
Sbjct: 1   MGNLSNLTLYTSPLLYRVSIYTLPRIAGIQGDVTQLTGKEASTYTYESYLPPQYNFSKAQ 60

Query: 61  IAKPRMETLLLGIPPTLGKIVYQSILSLYGKKEVNLQAHLDEDGKGRWNLSLIRKEHEGR 120
           IAKPRMETLLLGIPPTLGKIVYQSILSLYGKKEVNLQAHLDEDGKGRWNLSLIRKEHEGR
Sbjct: 61  IAKPRMETLLLGIPPTLGKIVYQSILSLYGKKEVNLQAHLDEDGKGRWNLSLIRKEHEGR 120

Query: 121 KVTLSLVAIRPTDPLQSGMASFKVESQVIGSWELAGQSKVGISHLISANRFALKEKVISL 180
           KVTLSLVAIRPTDPLQSGMASFKVESQVIGSWELAGQSKVGISHLISANRFALKEKVISL
Sbjct: 121 KVTLSLVAIRPTDPLQSGMASFKVESQVIGSWELAGQSKVGISHLISANRFALKEKVISL 180

Query: 181 SLS 183
           SLS
Sbjct: 181 SLS 183

The following BLAST results are available for this feature:
BLAST of Csor.00g159290 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g159290 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6585990.12.98e-124100.00hypothetical protein SDJN03_18723, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g159290 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g159290 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g159290.m01Csor.00g159290.m01mRNA