Csor.00g150870 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGCCAAATTGAAAGCATTTGGGGAAAGGTTCAGCTAAAATCGTCTCCTGAGAGGTTCTTTGGCTTCTTCAGGAACCATATGGGCGATTTGGTCCATATGTTCCCTGACCACTTCCAGAGCTTCCACTTTGTTGAAGGACAAAACTTTGACGATGGCAGCGTCGTGCACTGGAAATACCACCTCGGTGAGATATTATTATCTCGTTTCTTTCGTCTTTTAAAATGTTTACTTTAATCTTTACGATTCCAAGCTCTGGTTTTTGAGTTTTACCGTGTCTATTATTTGTCTAGACTGGTAATTTATAGGGTAGAGATTAAAATTTCTAAACGGTTGGTTAAAGTTATAATATTTGAGCTAATCGAACAATATTTAACTTTATAAGTTTATTTTTTTTAATTATACTTAACAAAATAAACTACGGCTTAATTCTAAAATAGTTAGTTTTATAACATAAAAAAAAAAAAATAATAAATAAATACTACTACAGCCGTGAGATCCCACATCAGTTAAGGGAGAAAACGAAACATTCATTATAAGGGTATGAAAACCTCTCCCTAACAAACACGTTTTGAAACCATAAGGTTGACGATGATACATAAGTAGCTAAAACAGACAATATTTGCTAGCTAAGCAGTCTTTTAGTGTGAGATCCCACGTCAGTTGAGAGAGAAAACGAAACATTGGGTGTGTAAACCTCTCCTTAACAGACACGTTTTAAAATTATAAGGTTGACGACGATACATAACGAGTTAAAACAGACAATATTTACTAGTAATGGACTTGAATTATTACGTTTAGTAGAAAATTAAGAACAAAATTGATATCAAACGAGATCAAATTTTAGACGTGAACTTATGGTTGTTGATGCATGAAGATACTAAAGAAAGGGTGTTGAATGATGAACAAATGAACAGGAATTCCAGAAGCAGTAAAGTTAAAGATGAAGAATAGGGATGAAGCAAGGACCATAATTTATGAAGTTCTTGAAGGAGATGCACTAAAGCATTACAAAGTTTTCAGAGCAAAACTTGAAACTGTTAGTGGAGGGTTAAACAAAGTGGGAGGAAGCTTTGCAAAATGGACAATTGAGTATGAAAAGGCTCATGAAAACGTTCCTTCACCAGAAGCCTACATGGAATTGGCTCTCAAAGTCAGCAAAGGTCTCGATGCTTATCTTTATCGCAACTAA ATGAGCCAAATTGAAAGCATTTGGGGAAAGGTTCAGCTAAAATCGTCTCCTGAGAGGTTCTTTGGCTTCTTCAGGAACCATATGGGCGATTTGGTCCATATGTTCCCTGACCACTTCCAGAGCTTCCACTTTGTTGAAGGACAAAACTTTGACGATGGCAGCGTCGTGCACTGGAAATACCACCTCGGAATTCCAGAAGCAGTAAAGTTAAAGATGAAGAATAGGGATGAAGCAAGGACCATAATTTATGAAGTTCTTGAAGGAGATGCACTAAAGCATTACAAAGTTTTCAGAGCAAAACTTGAAACTGTTAGTGGAGGGTTAAACAAAGTGGGAGGAAGCTTTGCAAAATGGACAATTGAGTATGAAAAGGCTCATGAAAACGTTCCTTCACCAGAAGCCTACATGGAATTGGCTCTCAAAGTCAGCAAAGGTCTCGATGCTTATCTTTATCGCAACTAA ATGAGCCAAATTGAAAGCATTTGGGGAAAGGTTCAGCTAAAATCGTCTCCTGAGAGGTTCTTTGGCTTCTTCAGGAACCATATGGGCGATTTGGTCCATATGTTCCCTGACCACTTCCAGAGCTTCCACTTTGTTGAAGGACAAAACTTTGACGATGGCAGCGTCGTGCACTGGAAATACCACCTCGGAATTCCAGAAGCAGTAAAGTTAAAGATGAAGAATAGGGATGAAGCAAGGACCATAATTTATGAAGTTCTTGAAGGAGATGCACTAAAGCATTACAAAGTTTTCAGAGCAAAACTTGAAACTGTTAGTGGAGGGTTAAACAAAGTGGGAGGAAGCTTTGCAAAATGGACAATTGAGTATGAAAAGGCTCATGAAAACGTTCCTTCACCAGAAGCCTACATGGAATTGGCTCTCAAAGTCAGCAAAGGTCTCGATGCTTATCTTTATCGCAACTAA MSQIESIWGKVQLKSSPERFFGFFRNHMGDLVHMFPDHFQSFHFVEGQNFDDGSVVHWKYHLGIPEAVKLKMKNRDEARTIIYEVLEGDALKHYKVFRAKLETVSGGLNKVGGSFAKWTIEYEKAHENVPSPEAYMELALKVSKGLDAYLYRN Homology
BLAST of Csor.00g150870 vs. ExPASy Swiss-Prot
Match: Q9SSK7 (MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 1.2e-13 Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 0
BLAST of Csor.00g150870 vs. ExPASy Swiss-Prot
Match: Q06394 (Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.5e-13 Identity = 49/152 (32.24%), Postives = 78/152 (51.32%), Query Frame = 0
BLAST of Csor.00g150870 vs. ExPASy Swiss-Prot
Match: Q9SSK5 (MLP-like protein 43 OS=Arabidopsis thaliana OX=3702 GN=MLP43 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 4.5e-13 Identity = 51/156 (32.69%), Postives = 75/156 (48.08%), Query Frame = 0
BLAST of Csor.00g150870 vs. ExPASy Swiss-Prot
Match: Q9SSK9 (MLP-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=MLP28 PE=1 SV=1) HSP 1 Score: 70.9 bits (172), Expect = 1.5e-11 Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = 0
BLAST of Csor.00g150870 vs. ExPASy Swiss-Prot
Match: Q06395 (Major latex protein 149 OS=Papaver somniferum OX=3469 GN=MLP149 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.5e-11 Identity = 44/142 (30.99%), Postives = 69/142 (48.59%), Query Frame = 0
BLAST of Csor.00g150870 vs. NCBI nr
Match: KAG6581211.1 (Major latex protein 146, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 317 bits (812), Expect = 3.15e-109 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of Csor.00g150870 vs. NCBI nr
Match: XP_022935294.1 (MLP-like protein 34 [Cucurbita moschata] >XP_023529011.1 MLP-like protein 34 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 312 bits (800), Expect = 2.13e-107 Identity = 149/153 (97.39%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of Csor.00g150870 vs. NCBI nr
Match: KAG6581210.1 (MLP-like protein 43, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 273 bits (698), Expect = 7.65e-92 Identity = 127/153 (83.01%), Postives = 140/153 (91.50%), Query Frame = 0
BLAST of Csor.00g150870 vs. NCBI nr
Match: XP_022983395.1 (MLP-like protein 34 [Cucurbita maxima]) HSP 1 Score: 278 bits (710), Expect = 3.14e-91 Identity = 131/153 (85.62%), Postives = 142/153 (92.81%), Query Frame = 0
BLAST of Csor.00g150870 vs. NCBI nr
Match: XP_022935296.1 (MLP-like protein 43 [Cucurbita moschata]) HSP 1 Score: 270 bits (690), Expect = 1.27e-90 Identity = 126/153 (82.35%), Postives = 139/153 (90.85%), Query Frame = 0
BLAST of Csor.00g150870 vs. ExPASy TrEMBL
Match: A0A6J1F509 (MLP-like protein 34 OS=Cucurbita moschata OX=3662 GN=LOC111442221 PE=3 SV=1) HSP 1 Score: 312 bits (800), Expect = 1.03e-107 Identity = 149/153 (97.39%), Postives = 152/153 (99.35%), Query Frame = 0
BLAST of Csor.00g150870 vs. ExPASy TrEMBL
Match: A0A6J1J5R8 (MLP-like protein 34 OS=Cucurbita maxima OX=3661 GN=LOC111482001 PE=3 SV=1) HSP 1 Score: 278 bits (710), Expect = 1.52e-91 Identity = 131/153 (85.62%), Postives = 142/153 (92.81%), Query Frame = 0
BLAST of Csor.00g150870 vs. ExPASy TrEMBL
Match: A0A6J1F458 (MLP-like protein 43 OS=Cucurbita moschata OX=3662 GN=LOC111442222 PE=3 SV=1) HSP 1 Score: 270 bits (690), Expect = 6.14e-91 Identity = 126/153 (82.35%), Postives = 139/153 (90.85%), Query Frame = 0
BLAST of Csor.00g150870 vs. ExPASy TrEMBL
Match: A0A5D3BR82 (MLP-like protein 423 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00800 PE=3 SV=1) HSP 1 Score: 244 bits (623), Expect = 1.04e-80 Identity = 112/154 (72.73%), Postives = 138/154 (89.61%), Query Frame = 0
BLAST of Csor.00g150870 vs. ExPASy TrEMBL
Match: A0A1S3C4M0 (MLP-like protein 423 OS=Cucumis melo OX=3656 GN=LOC103496832 PE=3 SV=1) HSP 1 Score: 244 bits (623), Expect = 1.04e-80 Identity = 112/154 (72.73%), Postives = 138/154 (89.61%), Query Frame = 0
BLAST of Csor.00g150870 vs. TAIR 10
Match: AT1G70880.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein ) HSP 1 Score: 80.9 bits (198), Expect = 1.0e-15 Identity = 52/144 (36.11%), Postives = 74/144 (51.39%), Query Frame = 0
BLAST of Csor.00g150870 vs. TAIR 10
Match: AT1G70850.1 (MLP-like protein 34 ) HSP 1 Score: 77.8 bits (190), Expect = 8.4e-15 Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 0
BLAST of Csor.00g150870 vs. TAIR 10
Match: AT1G70850.3 (MLP-like protein 34 ) HSP 1 Score: 77.8 bits (190), Expect = 8.4e-15 Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 0
BLAST of Csor.00g150870 vs. TAIR 10
Match: AT1G70890.1 (MLP-like protein 43 ) HSP 1 Score: 75.9 bits (185), Expect = 3.2e-14 Identity = 51/156 (32.69%), Postives = 75/156 (48.08%), Query Frame = 0
BLAST of Csor.00g150870 vs. TAIR 10
Match: AT1G70830.2 (MLP-like protein 28 ) HSP 1 Score: 70.9 bits (172), Expect = 1.0e-12 Identity = 47/157 (29.94%), Postives = 77/157 (49.04%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|