Csor.00g144350 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSstart_codoninitialpolypeptideintronterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAGAAGATTTCGAGTTCGGTGACAAAGTCCCGCCGGCCGTCAACCGCATGGTACTCCAGAGCTCCCTTGAAAGTATCGCGATGTCATTTCTTTCTTGCTTGTTTGCCGCCTAATCTGAGATTCCTGTTAATGCAGCTTATCCTTTATTTTTCTCCAACGAAGTTATGATTTGGACATGGTTCTGGGGGTTTACTTTGAGGTTAACGTATTTTGTCGATATTTGTTCGATTTCGCTCTCGAGATCTGATTGTCTCTGCAGTCGACTGTAGCAAATAATGCAGTTGAATTTTTTTTGGGATTTGCTCTTCGAGTACCCTTATAATGCAGTTGGATGTTCCGTTCCTTCTTGTATACACACCTTGCTAGGTGATTCCCTTGTATGCTTAGTTTTTAGGTGGATTTTCTTTGTTCTGATTGTGTACAATTCGGTATCAAATATCTACTTTTCTGAAGAATGGTGCTGTTTTTGCAATGTTTTTAGGATGATGCTGATGCATGTGATCATTGTGTTATTTGGAGTCGGAAAAGATTTAAAAAAACTGAACACCTTTTTTGCAATTTCCTGAAAATGGATGGAATTTTAAACTATAGGATGATACATGAATTTGTTAATTCGATCCTACATGTATGACCGAACTTGGAATTGGTGGATGGTTTAATTGTACCTATTCAGTTAATAAGAATAATAACAGTCCTGTTCAGTTCAGTTTTTCATATTGTTAGAGGATTTTCCGTGCATCTCTGATGTGGTATCCTCAGCATCTTTCGTAGCTAAGAATCAGATTAATGATTAGTTGGAGTACAAGGCTACAATTGATCTCCTTTTCGTGTTTACACATAACTTTGCTTGCATGAGATTGCTGACGAAACCAGCCAGCTTCCTTTCTGGGGTGGTTCATGAGTTCCTTCTACAATTCTTGTTGTTGTGTATGTTCTGGTTCATGGTGACGAACAGTTAATATTGGCCTTGGTGCACAGGGGAACGTGATTGGAGATGCGGATGGAAGAGGATTCAATCCAGGACTGATTGTGCTGCTCGTAGTCGGCGGGCTGCTCTTGGCTTTTCTTGTTGTGAATTATGCTCTCTACATGTATGCGCAGAAGACCCTCCCACCACAAAAGAAGAACCAGTTTCCAAGAAGAAGATGA ATGGAAGAAGATTTCGAGTTCGGTGACAAAGTCCCGCCGGCCGTCAACCGCATGGGGAACGTGATTGGAGATGCGGATGGAAGAGGATTCAATCCAGGACTGATTGTGCTGCTCGTAGTCGGCGGGCTGCTCTTGGCTTTTCTTGTTGTGAATTATGCTCTCTACATGTATGCGCAGAAGACCCTCCCACCACAAAAGAAGAACCAGTTTCCAAGAAGAAGATGA ATGGAAGAAGATTTCGAGTTCGGTGACAAAGTCCCGCCGGCCGTCAACCGCATGGGGAACGTGATTGGAGATGCGGATGGAAGAGGATTCAATCCAGGACTGATTGTGCTGCTCGTAGTCGGCGGGCTGCTCTTGGCTTTTCTTGTTGTGAATTATGCTCTCTACATGTATGCGCAGAAGACCCTCCCACCACAAAAGAAGAACCAGTTTCCAAGAAGAAGATGA MEEDFEFGDKVPPAVNRMGNVIGDADGRGFNPGLIVLLVVGGLLLAFLVVNYALYMYAQKTLPPQKKNQFPRRR Homology
BLAST of Csor.00g144350 vs. ExPASy Swiss-Prot
Match: Q42337 (DNA-binding protein S1FA2 OS=Arabidopsis thaliana OX=3702 GN=S1FA2 PE=3 SV=2) HSP 1 Score: 66.2 bits (160), Expect = 1.7e-10 Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of Csor.00g144350 vs. ExPASy Swiss-Prot
Match: P42551 (DNA-binding protein S1FA1 OS=Arabidopsis thaliana OX=3702 GN=S1FA1 PE=3 SV=2) HSP 1 Score: 65.5 bits (158), Expect = 3.0e-10 Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0
BLAST of Csor.00g144350 vs. ExPASy Swiss-Prot
Match: P42552 (DNA-binding protein S1FA OS=Spinacia oleracea OX=3562 GN=S1FA PE=3 SV=1) HSP 1 Score: 65.1 bits (157), Expect = 3.9e-10 Identity = 30/53 (56.60%), Postives = 40/53 (75.47%), Query Frame = 0
BLAST of Csor.00g144350 vs. ExPASy Swiss-Prot
Match: Q93VI0 (DNA-binding protein S1FA3 OS=Arabidopsis thaliana OX=3702 GN=S1FA3 PE=3 SV=1) HSP 1 Score: 63.9 bits (154), Expect = 8.6e-10 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0
BLAST of Csor.00g144350 vs. ExPASy Swiss-Prot
Match: P42553 (DNA-binding protein S1FA1 OS=Oryza sativa subsp. japonica OX=39947 GN=S1FA1 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 2.5e-09 Identity = 32/59 (54.24%), Postives = 42/59 (71.19%), Query Frame = 0
BLAST of Csor.00g144350 vs. NCBI nr
Match: KAG6604436.1 (DNA-binding protein S1FA2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 147 bits (371), Expect = 1.78e-44 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Csor.00g144350 vs. NCBI nr
Match: XP_022926041.1 (DNA-binding protein S1FA-like [Cucurbita moschata]) HSP 1 Score: 132 bits (331), Expect = 3.51e-38 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of Csor.00g144350 vs. NCBI nr
Match: XP_022979165.1 (DNA-binding protein S1FA-like [Cucurbita maxima]) HSP 1 Score: 124 bits (311), Expect = 3.95e-35 Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of Csor.00g144350 vs. NCBI nr
Match: XP_038881351.1 (DNA-binding protein S1FA-like [Benincasa hispida]) HSP 1 Score: 120 bits (300), Expect = 1.88e-33 Identity = 60/67 (89.55%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of Csor.00g144350 vs. NCBI nr
Match: XP_004143239.1 (DNA-binding protein S1FA [Cucumis sativus] >KGN48135.1 hypothetical protein Csa_003029 [Cucumis sativus]) HSP 1 Score: 117 bits (292), Expect = 3.12e-32 Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of Csor.00g144350 vs. ExPASy TrEMBL
Match: A0A6J1EDS2 (DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111433279 PE=3 SV=1) HSP 1 Score: 132 bits (331), Expect = 1.70e-38 Identity = 66/67 (98.51%), Postives = 67/67 (100.00%), Query Frame = 0
BLAST of Csor.00g144350 vs. ExPASy TrEMBL
Match: A0A6J1ISG2 (DNA-binding protein S1FA-like OS=Cucurbita maxima OX=3661 GN=LOC111478884 PE=3 SV=1) HSP 1 Score: 124 bits (311), Expect = 1.91e-35 Identity = 62/67 (92.54%), Postives = 64/67 (95.52%), Query Frame = 0
BLAST of Csor.00g144350 vs. ExPASy TrEMBL
Match: A0A0A0KEM3 (DNA-binding protein S1FA OS=Cucumis sativus OX=3659 GN=Csa_6G445000 PE=3 SV=1) HSP 1 Score: 117 bits (292), Expect = 1.51e-32 Identity = 58/67 (86.57%), Postives = 62/67 (92.54%), Query Frame = 0
BLAST of Csor.00g144350 vs. ExPASy TrEMBL
Match: A0A6J1HDT2 (DNA-binding protein S1FA-like OS=Cucurbita moschata OX=3662 GN=LOC111463054 PE=3 SV=1) HSP 1 Score: 115 bits (289), Expect = 4.33e-32 Identity = 57/67 (85.07%), Postives = 63/67 (94.03%), Query Frame = 0
BLAST of Csor.00g144350 vs. ExPASy TrEMBL
Match: A0A5A7TZ88 (DNA-binding protein S1FA-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00690 PE=3 SV=1) HSP 1 Score: 114 bits (284), Expect = 2.50e-31 Identity = 57/67 (85.07%), Postives = 61/67 (91.04%), Query Frame = 0
BLAST of Csor.00g144350 vs. TAIR 10
Match: AT2G37120.1 (S1FA-like DNA-binding protein ) HSP 1 Score: 66.2 bits (160), Expect = 1.2e-11 Identity = 29/49 (59.18%), Postives = 39/49 (79.59%), Query Frame = 0
BLAST of Csor.00g144350 vs. TAIR 10
Match: AT3G53370.1 (S1FA-like DNA-binding protein ) HSP 1 Score: 65.5 bits (158), Expect = 2.1e-11 Identity = 31/50 (62.00%), Postives = 39/50 (78.00%), Query Frame = 0
BLAST of Csor.00g144350 vs. TAIR 10
Match: AT3G09735.1 (S1FA-like DNA-binding protein ) HSP 1 Score: 63.9 bits (154), Expect = 6.1e-11 Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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