Csor.00g136360 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g136360
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RING-type domain-containing protein
Location	Csor_Chr12: 220260 .. 221621 (-)
RNA-Seq Expression	Csor.00g136360
Synteny	Csor.00g136360

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTATTATCGGCTATCGAGGTCTTCTTGTAAGGATTCTCTGAAAGTCCTCGAAGAAGATGTAAATCGCGCCAATGCTCTGTGAGAATCCCTTTTCCCTTCACTTTTTTATCTTCCCAGTTCATAGAAATTTCGATCGGTTTAGTGGTTTTGGTGAAATTATGGTGGGAAACTATGGTGGGTTTGCAGGGCTGTTGCAATTCCAAGAGCCAAACATGGTTCATATCTCCAAATGAAATTGGTTTACAGTCAATTAGCTCCACTGTTTCTGTTTTTGATGCAATGGGTGGATTGTTCTTGCACATGTGTTCTTCTCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGCGCGTCTCTCTTTTCTTTCACTTCTTTAATGTGGCTTTGTTTTTTATGTTTATGTGTCTTAGTTTGTTCTGTCAAATGATGTTGTTCAGGTTTACACAGATGGAAGACCCAACCTGTCAGCCCATGGAAGAAAGGCCACTCTCAAAGATTTTTATGGTACATTTTCTTGCCTTCAAACACTCACTCTGTTTTGGAGTTTTGTTTCCCAAACACTTTCACACACATCCATGATTGTAGGAGCATGAACTTAAGCGAGTAGATATTGTCCTCTTTGAGCATTTTCTTTCCGTCTTCCCCTCAAAGTTTTAAAAACACGACTGATAGGGAGAGGTTTCTACATTCTTATAAGAAATGTTTCGTTCCCCTCTTCAACCGATGTAGGATCTCACATTTTGCCCCGTGTTTGATATCATTAGGCTTGGTCTATTGTGGTATTGATATTGTATGAGTTTGAGTATATGAGCTTGTTTTGAGTCCAACAAACGTGCTACTTCAGCTGTGATATTGCCATCCCTTCAACGGCTCCAAGCGAACGCCAGGGAGTTGGATAACGCTAAAGAGAAGCGTGTGGGAGTCGAAGGAGATGGAAAGCTCTCCAATGGTGATGTAGAGAGAGAAGAAGAATGTGGGATTTGCTTAGAAGCTTCCACAAAGATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGCTACCACAATTGGTAACTACACATACATACAAACCTTCCTAGATCATCACCATCGGGCTCTGGGCTCGACTGCGTTAATGTCTTTGCTTGTGAATGATTTGTAGGAACACGAGATCGGAGTCGTGCCCGTTTTGTCGGGGGAGCTTGAAGAGGATCAAATCAGAGGATTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGACACTGAAAAAGTCTCCAAGGAAGATCTGTCACGGTTCTATCTCTATATAAGCAGCCTGCCAAAGGAATATCCAGACGCCCTTTTCTTAGTTTATTATGAATACTTGATTTGA

mRNA sequence

ATGTATTATCGGCTATCGAGGTCTTCTTGTAAGGATTCTCTGAAAGTCCTCGAAGAAGATGTAAATCGCGCCAATGCTCTGGCTGTTGCAATTCCAAGAGCCAAACATGGTTCATATCTCCAAATGAAATTGGTTTACAGTCAATTAGCTCCACTGTTTCTGTTTTTGATGCAATGGGTGGATTGTTCTTGCACATGTGTTCTTCTCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGTTTACACAGATGGAAGACCCAACCTGTCAGCCCATGGAAGAAAGGCCACTCTCAAAGATTTTTATGCTGTGATATTGCCATCCCTTCAACGGCTCCAAGCGAACGCCAGGGAGTTGGATAACGCTAAAGAGAAGCGTGTGGGAGTCGAAGGAGATGGAAAGCTCTCCAATGGTGATGTAGAGAGAGAAGAAGAATGTGGGATTTGCTTAGAAGCTTCCACAAAGATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGCTACCACAATTGGAACACGAGATCGGAGTCGTGCCCGTTTTGTCGGGGGAGCTTGAAGAGGATCAAATCAGAGGATTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGACACTGAAAAAGTCTCCAAGGAAGATCTGTCACGGTTCTATCTCTATATAAGCAGCCTGCCAAAGGAATATCCAGACGCCCTTTTCTTAGTTTATTATGAATACTTGATTTGA

Coding sequence (CDS)

ATGTATTATCGGCTATCGAGGTCTTCTTGTAAGGATTCTCTGAAAGTCCTCGAAGAAGATGTAAATCGCGCCAATGCTCTGGCTGTTGCAATTCCAAGAGCCAAACATGGTTCATATCTCCAAATGAAATTGGTTTACAGTCAATTAGCTCCACTGTTTCTGTTTTTGATGCAATGGGTGGATTGTTCTTGCACATGTGTTCTTCTCAGATACCTAAATTTCTTCCACATACTTGTTTACAAGGTTTACACAGATGGAAGACCCAACCTGTCAGCCCATGGAAGAAAGGCCACTCTCAAAGATTTTTATGCTGTGATATTGCCATCCCTTCAACGGCTCCAAGCGAACGCCAGGGAGTTGGATAACGCTAAAGAGAAGCGTGTGGGAGTCGAAGGAGATGGAAAGCTCTCCAATGGTGATGTAGAGAGAGAAGAAGAATGTGGGATTTGCTTAGAAGCTTCCACAAAGATGGTGTTGCCAAACTGCTGCCATTCAATGTGCATCAAATGCTACCACAATTGGAACACGAGATCGGAGTCGTGCCCGTTTTGTCGGGGGAGCTTGAAGAGGATCAAATCAGAGGATTTGTGGGTGCTAACTTGCAGTGAAGATGTGGTTGACACTGAAAAAGTCTCCAAGGAAGATCTGTCACGGTTCTATCTCTATATAAGCAGCCTGCCAAAGGAATATCCAGACGCCCTTTTCTTAGTTTATTATGAATACTTGATTTGA

Protein sequence

MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWVDCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANARELDNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEYLI

Homology

[Close]

BLAST of Csor.00g136360 vs. ExPASy Swiss-Prot
Match: Q9M022 (E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 2.1e-57
Identity = 113/240 (47.08%), Postives = 143/240 (59.58%), Query Frame = 0


Query: 7   RSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWVDCSCTC 66
           R S KDSLK LE D+  AN LA   P    G Y+QM+L YS  A LFLFL+QW DC    
Sbjct: 2   RKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH--- 61

Query: 67  VLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANARELDNAKEK 126
                L    IL+YK Y DG+  +S H RK ++++FY V+ PSL +L     +++  K+K
Sbjct: 62  -FAGALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 121

Query: 127 RV--------GVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRS 186
            +             GK+S  D+EREEECGICLE   K+VLP C HSMCI CY NW  RS
Sbjct: 122 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 181

Query: 187 ESCPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVY 239
           +SCPFCRGSLKR+ S DLW+ TCS ++ D   + KE+L R  +YI  LP    D   + Y
Sbjct: 182 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237

[Close]

BLAST of Csor.00g136360 vs. NCBI nr
Match: KAG6585198.1 (E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 493 bits (1268), Expect = 8.98e-176
Identity = 243/243 (100.00%), Postives = 243/243 (100.00%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60
           MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV
Sbjct: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60

Query: 61  DCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL 120
           DCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL
Sbjct: 61  DCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL 120

Query: 121 DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES 180
           DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES
Sbjct: 121 DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES 180

Query: 181 CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE 240
           CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE
Sbjct: 181 CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE 240

Query: 241 YLI 243
           YLI
Sbjct: 241 YLI 243

[Close]

BLAST of Csor.00g136360 vs. NCBI nr
Match: XP_022951171.1 (uncharacterized protein LOC111454098 [Cucurbita moschata])

HSP 1 Score: 490 bits (1261), Expect = 1.05e-174
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60
           MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV
Sbjct: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60

Query: 61  DCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL 120
           DCSCTCVL RYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL
Sbjct: 61  DCSCTCVLPRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL 120

Query: 121 DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES 180
           DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES
Sbjct: 121 DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES 180

Query: 181 CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE 240
           CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE
Sbjct: 181 CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE 240

Query: 241 YLI 243
           YLI
Sbjct: 241 YLI 243

[Close]

BLAST of Csor.00g136360 vs. NCBI nr
Match: XP_023536785.1 (uncharacterized protein LOC111798063 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 487 bits (1253), Expect = 1.74e-173
Identity = 240/243 (98.77%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60
           MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV
Sbjct: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60

Query: 61  DCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL 120
           DCSCTCVL RYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQA+A+EL
Sbjct: 61  DCSCTCVLPRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQASAKEL 120

Query: 121 DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES 180
           DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES
Sbjct: 121 DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES 180

Query: 181 CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE 240
           CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE
Sbjct: 181 CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE 240

Query: 241 YLI 243
           YLI
Sbjct: 241 YLI 243

[Close]

BLAST of Csor.00g136360 vs. NCBI nr
Match: XP_023002087.1 (uncharacterized protein LOC111496061 [Cucurbita maxima])

HSP 1 Score: 485 bits (1249), Expect = 3.82e-171
Identity = 239/243 (98.35%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60
           MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPL LFLMQWV
Sbjct: 111 MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLLLFLMQWV 170

Query: 61  DCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL 120
           DCSCTCVL RYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANA+EL
Sbjct: 171 DCSCTCVLPRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAKEL 230

Query: 121 DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES 180
           DNAKEKRVGV+GDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES
Sbjct: 231 DNAKEKRVGVQGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES 290

Query: 181 CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE 240
           CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE
Sbjct: 291 CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE 350

Query: 241 YLI 243
           YLI
Sbjct: 351 YLI 353

[Close]

BLAST of Csor.00g136360 vs. NCBI nr
Match: XP_038885383.1 (E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida])

HSP 1 Score: 447 bits (1149), Expect = 1.66e-157
Identity = 220/251 (87.65%), Postives = 231/251 (92.03%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60
           MYYRL+RSSCKDSLKVLEEDV  ANALA AIPRAKHGSYLQMKLVY+QLAP FLFLMQW+
Sbjct: 1   MYYRLARSSCKDSLKVLEEDVQHANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL 120
           DCSCTC+L R LNFFHILVYKVYTDGRP++SAHGRKAT+KDFYAVILPSLQRLQANA E 
Sbjct: 61  DCSCTCILPRNLNFFHILVYKVYTDGRPSISAHGRKATVKDFYAVILPSLQRLQANAEEF 120

Query: 121 DNAKEKRVG--------VEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYH 180
           DNAKEKRV         V+GDGKLS GD+ERE+ECGICLE STKMVLPNCCHSMCIKCYH
Sbjct: 121 DNAKEKRVKSGNSSEKRVQGDGKLSKGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180

Query: 181 NWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPD 240
           NWNTRSESCPFCRGSLKRIKSEDLWVLTC+EDVVD EKVSKEDLSRFYLYISSLPKEYPD
Sbjct: 181 NWNTRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPD 240

Query: 241 ALFLVYYEYLI 243
           ALFLVYYEYLI
Sbjct: 241 ALFLVYYEYLI 251

[Close]

BLAST of Csor.00g136360 vs. ExPASy TrEMBL
Match: A0A6J1GGU1 (uncharacterized protein LOC111454098 OS=Cucurbita moschata OX=3662 GN=LOC111454098 PE=4 SV=1)

HSP 1 Score: 490 bits (1261), Expect = 5.08e-175
Identity = 242/243 (99.59%), Postives = 242/243 (99.59%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60
           MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV
Sbjct: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60

Query: 61  DCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL 120
           DCSCTCVL RYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL
Sbjct: 61  DCSCTCVLPRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL 120

Query: 121 DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES 180
           DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES
Sbjct: 121 DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES 180

Query: 181 CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE 240
           CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE
Sbjct: 181 CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE 240

Query: 241 YLI 243
           YLI
Sbjct: 241 YLI 243

[Close]

BLAST of Csor.00g136360 vs. ExPASy TrEMBL
Match: A0A6J1KIH2 (uncharacterized protein LOC111496061 OS=Cucurbita maxima OX=3661 GN=LOC111496061 PE=4 SV=1)

HSP 1 Score: 485 bits (1249), Expect = 1.85e-171
Identity = 239/243 (98.35%), Postives = 241/243 (99.18%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60
           MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPL LFLMQWV
Sbjct: 111 MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLLLFLMQWV 170

Query: 61  DCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL 120
           DCSCTCVL RYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANA+EL
Sbjct: 171 DCSCTCVLPRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAKEL 230

Query: 121 DNAKEKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES 180
           DNAKEKRVGV+GDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES
Sbjct: 231 DNAKEKRVGVQGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSES 290

Query: 181 CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE 240
           CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE
Sbjct: 291 CPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYE 350

Query: 241 YLI 243
           YLI
Sbjct: 351 YLI 353

[Close]

BLAST of Csor.00g136360 vs. ExPASy TrEMBL
Match: A0A1S3BB06 (uncharacterized protein LOC103487741 OS=Cucumis melo OX=3656 GN=LOC103487741 PE=4 SV=1)

HSP 1 Score: 444 bits (1142), Expect = 9.39e-157
Identity = 217/251 (86.45%), Postives = 228/251 (90.84%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60
           MYYRL+ SSC DSLKVLEEDV RANALA AIPRAKHGSYLQMKLVY+QLAP FLFLMQW+
Sbjct: 1   MYYRLAMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL 120
           DCSCTC+L RYLNFFHILVYKVYTDGRPN+SAHGRKAT+KDFYAVILPSLQRLQAN  E 
Sbjct: 61  DCSCTCILPRYLNFFHILVYKVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQANVEEF 120

Query: 121 DNAKEKRVG--------VEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYH 180
           DNAKEK           ++GDGKLSNGD+ERE+ECGICLE STKMVLPNCCHSMCIKCYH
Sbjct: 121 DNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKCYH 180

Query: 181 NWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPD 240
           NWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVD EKVSKEDLSRFYLYISSLPKEYPD
Sbjct: 181 NWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPKEYPD 240

Query: 241 ALFLVYYEYLI 243
           ALFLVYYEYLI
Sbjct: 241 ALFLVYYEYLI 251

[Close]

BLAST of Csor.00g136360 vs. ExPASy TrEMBL
Match: A0A6J1BQ55 (RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111004624 PE=4 SV=1)

HSP 1 Score: 442 bits (1136), Expect = 8.29e-156
Identity = 218/253 (86.17%), Postives = 232/253 (91.70%), Query Frame = 0


Query: 1   MYYRLSRSS--CKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQ 60
           MYYRL+RSS  CKDS+KVLEEDV RANALA AIPRAKHGSYLQMKLVY+ LAPLFLFLMQ
Sbjct: 1   MYYRLTRSSSSCKDSMKVLEEDVQRANALAAAIPRAKHGSYLQMKLVYNHLAPLFLFLMQ 60

Query: 61  WVDCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAR 120
           WVDCSCTC+L RYLNFFHIL+YKVYTDGRPN+SAHGRKAT+KDFYAVILPSLQRLQAN  
Sbjct: 61  WVDCSCTCILPRYLNFFHILIYKVYTDGRPNISAHGRKATIKDFYAVILPSLQRLQANVD 120

Query: 121 ELDNAKEKRVGVE--------GDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKC 180
           ELD+A ++RV  +        GDGKLSNGD+ERE+ECGICLE STKMVLPNCCHSMCIKC
Sbjct: 121 ELDSAIDRRVKADNSNDKRAQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCIKC 180

Query: 181 YHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEY 240
           YHNWNTRSESCPFCRGSL+RIKSEDLWVLTCSEDVVD EKVSKEDLSRFYLYISSLPKEY
Sbjct: 181 YHNWNTRSESCPFCRGSLRRIKSEDLWVLTCSEDVVDAEKVSKEDLSRFYLYISSLPKEY 240

Query: 241 PDALFLVYYEYLI 243
           PDALFLVYYEYLI
Sbjct: 241 PDALFLVYYEYLI 253

[Close]

BLAST of Csor.00g136360 vs. ExPASy TrEMBL
Match: A0A5A7V5Q1 (RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold501G001750 PE=4 SV=1)

HSP 1 Score: 438 bits (1127), Expect = 2.10e-154
Identity = 217/255 (85.10%), Postives = 228/255 (89.41%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60
           MYYRL+ SSC DSLKVLEEDV RANALA AIPRAKHGSYLQMKLVY+QLAP FLFLMQW+
Sbjct: 1   MYYRLAMSSCADSLKVLEEDVRRANALAAAIPRAKHGSYLQMKLVYNQLAPFFLFLMQWL 60

Query: 61  DCSCTCVLLRYLNFFHILVYK----VYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQAN 120
           DCSCTC+L RYLNFFHILVYK    VYTDGRPN+SAHGRKAT+KDFYAVILPSLQRLQAN
Sbjct: 61  DCSCTCILPRYLNFFHILVYKAGLSVYTDGRPNISAHGRKATVKDFYAVILPSLQRLQAN 120

Query: 121 ARELDNAKEKRVG--------VEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCI 180
             E DNAKEK           ++GDGKLSNGD+ERE+ECGICLE STKMVLPNCCHSMCI
Sbjct: 121 VEEFDNAKEKHAKSDNSSERRIQGDGKLSNGDLEREDECGICLEPSTKMVLPNCCHSMCI 180

Query: 181 KCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPK 240
           KCYHNWN RSESCPFCRGSLKRIKSEDLWVLTC+EDVVD EKVSKEDLSRFYLYISSLPK
Sbjct: 181 KCYHNWNMRSESCPFCRGSLKRIKSEDLWVLTCNEDVVDAEKVSKEDLSRFYLYISSLPK 240

Query: 241 EYPDALFLVYYEYLI 243
           EYPDALFLVYYEYLI
Sbjct: 241 EYPDALFLVYYEYLI 255

[Close]

BLAST of Csor.00g136360 vs. TAIR 10
Match: AT1G24440.1 (RING/U-box superfamily protein )

HSP 1 Score: 321.2 bits (822), Expect = 7.0e-88
Identity = 158/253 (62.45%), Postives = 194/253 (76.68%), Query Frame = 0


Query: 1   MYYRLSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWV 60
           MYY+L++SS +DSLK+LE D+  AN LA  IP  K G  LQMKLV S LAP F+FL+QW+
Sbjct: 1   MYYQLTKSSYRDSLKILEADIEHANGLAAEIPMGKSGVRLQMKLVCSNLAPFFIFLLQWM 60

Query: 61  DCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANAREL 120
           D S  C+L RY +FFHIL+YKV  DGR N S +GRKAT+++FY VILPSL+RL  N  +L
Sbjct: 61  DFS--CLLPRYFDFFHILIYKVRADGRWNRSRYGRKATIREFYGVILPSLERLHINFADL 120

Query: 121 DNAK----------EKRVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKC 180
            +            +K+  +EG   +++ D+ERE+ECGICLE  TKMVLPNCCH+MCIKC
Sbjct: 121 PDESLWYPNPKAITKKQYDIEGSRYMNSIDLEREDECGICLEPCTKMVLPNCCHAMCIKC 180

Query: 181 YHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEY 240
           Y NWNT+SESCPFCRGS+KR+ SEDLWVLTC EDVVD E V+KEDL RFYL+I+SLPK+Y
Sbjct: 181 YRNWNTKSESCPFCRGSIKRVNSEDLWVLTCDEDVVDPETVTKEDLLRFYLHINSLPKDY 240

Query: 241 PDALFLVYYEYLI 244
           P+A FLVY EYLI
Sbjct: 241 PEAAFLVYNEYLI 251

[Close]

BLAST of Csor.00g136360 vs. TAIR 10
Match: AT1G13195.1 (RING/U-box superfamily protein )

HSP 1 Score: 306.6 bits (784), Expect = 1.8e-83
Identity = 151/245 (61.63%), Postives = 182/245 (74.29%), Query Frame = 0


Query: 6   SRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWVDCSCT 65
           S SS  +SLKVLE DV  AN+LA AIP  K+   LQMKLV+S  A L LFL++W+D S +
Sbjct: 12  SSSSYYESLKVLEADVQHANSLAEAIPMGKNNVRLQMKLVHSNFASLLLFLLRWIDLSSS 71

Query: 66  CVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANARELDNAK- 125
           C++ RYLN FH+LVYKV +DG+P L+ HGRKAT+ +FY VILPSLQ L +N  EL+    
Sbjct: 72  CLIPRYLNLFHVLVYKVQSDGQPKLTTHGRKATISEFYGVILPSLQLLHSNLDELETTDI 131

Query: 126 -------EKRVGVEG-DGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNT 185
                   K++  E    + SN  +EREEECGICLE  TKMVLPNCCHSMCIKCY NWN 
Sbjct: 132 GFDLKRLSKKITKEARSSRFSNAGLEREEECGICLETCTKMVLPNCCHSMCIKCYRNWNL 191

Query: 186 RSESCPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFL 242
           +S+SCPFCRGS+KR+ SEDLWVL    DVVDT   S+EDL RFYLYI+SLPK+YP+ALF+
Sbjct: 192 KSQSCPFCRGSMKRVNSEDLWVLAGDNDVVDTRTASREDLFRFYLYINSLPKDYPEALFV 251

[Close]

BLAST of Csor.00g136360 vs. TAIR 10
Match: AT1G13195.2 (RING/U-box superfamily protein )

HSP 1 Score: 278.1 bits (710), Expect = 6.8e-75
Identity = 133/216 (61.57%), Postives = 162/216 (75.00%), Query Frame = 0


Query: 35  KHGSYLQMKLVYSQLAPLFLFLMQWVDCSCTCVLLRYLNFFHILVYKVYTDGRPNLSAHG 94
           K+   LQMKLV+S  A L LFL++W+D S +C++ RYLN FH+LVYKV +DG+P L+ HG
Sbjct: 3   KNNVRLQMKLVHSNFASLLLFLLRWIDLSSSCLIPRYLNLFHVLVYKVQSDGQPKLTTHG 62

Query: 95  RKATLKDFYAVILPSLQRLQANARELDNAK--------EKRVGVEG-DGKLSNGDVEREE 154
           RKAT+ +FY VILPSLQ L +N  EL+            K++  E    + SN  +EREE
Sbjct: 63  RKATISEFYGVILPSLQLLHSNLDELETTDIGFDLKRLSKKITKEARSSRFSNAGLEREE 122

Query: 155 ECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSESCPFCRGSLKRIKSEDLWVLTCSEDV 214
           ECGICLE  TKMVLPNCCHSMCIKCY NWN +S+SCPFCRGS+KR+ SEDLWVL    DV
Sbjct: 123 ECGICLETCTKMVLPNCCHSMCIKCYRNWNLKSQSCPFCRGSMKRVNSEDLWVLAGDNDV 182

Query: 215 VDTEKVSKEDLSRFYLYISSLPKEYPDALFLVYYEY 242
           VDT   S+EDL RFYLYI+SLPK+YP+ALF+VYYEY
Sbjct: 183 VDTRTASREDLFRFYLYINSLPKDYPEALFVVYYEY 218

[Close]

BLAST of Csor.00g136360 vs. TAIR 10
Match: AT5G58787.1 (RING/U-box superfamily protein )

HSP 1 Score: 225.7 bits (574), Expect = 4.0e-59
Identity = 107/236 (45.34%), Postives = 156/236 (66.10%), Query Frame = 0


Query: 5   LSRSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWVDCSC 64
           +++ S KDSLK LE D+  AN LA+  PR K G+ +QM+L YS  A  FLFL+QW DC  
Sbjct: 1   MAKLSFKDSLKALEADIQHANTLALDYPREKDGARVQMRLSYSPTAQFFLFLVQWTDCK- 60

Query: 65  TCVLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANARELDNAK 124
              L  +L    +L+Y  Y DG+  +S + RKA++++F AVILPSL +LQ    ++D++K
Sbjct: 61  ---LAGFLGLLRVLIYMTYADGKTTMSVYERKASIREFQAVILPSLSQLQRGVTDIDDSK 120

Query: 125 EK-----RVGVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRSE 184
           +K     R   + + ++S  ++EREEECGIC+E ++K+VLPNC HS+CIKCY +W  RS+
Sbjct: 121 QKEVCKMRYRKKDESEMSEIEIEREEECGICMEMNSKVVLPNCTHSLCIKCYRDWRGRSQ 180

Query: 185 SCPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALF 236
           SCPFCR SLKR+ S DLW+     D V+   +++E+  R ++YI  LP   PD ++
Sbjct: 181 SCPFCRDSLKRVDSGDLWMFLDQNDTVNLTAIARENQKRLFMYIEKLPLVVPDQVY 232

[Close]

BLAST of Csor.00g136360 vs. TAIR 10
Match: AT5G01520.1 (RING/U-box superfamily protein )

HSP 1 Score: 223.8 bits (569), Expect = 1.5e-58
Identity = 113/240 (47.08%), Postives = 143/240 (59.58%), Query Frame = 0


Query: 7   RSSCKDSLKVLEEDVNRANALAVAIPRAKHGSYLQMKLVYSQLAPLFLFLMQWVDCSCTC 66
           R S KDSLK LE D+  AN LA   P    G Y+QM+L YS  A LFLFL+QW DC    
Sbjct: 2   RKSFKDSLKALEADIQFANTLASEYPEEYDGGYVQMRLSYSPAAHLFLFLLQWTDCH--- 61

Query: 67  VLLRYLNFFHILVYKVYTDGRPNLSAHGRKATLKDFYAVILPSLQRLQANARELDNAKEK 126
                L    IL+YK Y DG+  +S H RK ++++FY V+ PSL +L     +++  K+K
Sbjct: 62  -FAGALGLLRILIYKAYVDGKTTMSLHERKTSIREFYDVLFPSLLQLHGGITDVEERKQK 121

Query: 127 RV--------GVEGDGKLSNGDVEREEECGICLEASTKMVLPNCCHSMCIKCYHNWNTRS 186
            +             GK+S  D+EREEECGICLE   K+VLP C HSMCI CY NW  RS
Sbjct: 122 EICDKRYRKKDRTDKGKMSEIDLEREEECGICLEIRNKVVLPTCNHSMCINCYRNWRARS 181

Query: 187 ESCPFCRGSLKRIKSEDLWVLTCSEDVVDTEKVSKEDLSRFYLYISSLPKEYPDALFLVY 239
           +SCPFCRGSLKR+ S DLW+ TCS ++ D   + KE+L R  +YI  LP    D   + Y
Sbjct: 182 QSCPFCRGSLKRVNSGDLWIYTCSAEIADLPAIYKENLKRLLIYIDKLPLVTSDPNLVPY 237

The following BLAST results are available for this feature:

BLAST of Csor.00g136360 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M022	2.1e-57	47.08	E3 ubiquitin-protein ligase AIRP2 OS=Arabidopsis thaliana OX=3702 GN=AIRP2 PE=1 ...	[more]

BLAST of Csor.00g136360 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6585198.1	8.98e-176	100.00	E3 ubiquitin-protein ligase AIRP2, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022951171.1	1.05e-174	99.59	uncharacterized protein LOC111454098 [Cucurbita moschata]	[more]
XP_023536785.1	1.74e-173	98.77	uncharacterized protein LOC111798063 [Cucurbita pepo subsp. pepo]	[more]
XP_023002087.1	3.82e-171	98.35	uncharacterized protein LOC111496061 [Cucurbita maxima]	[more]
XP_038885383.1	1.66e-157	87.65	E3 ubiquitin-protein ligase AIRP2-like [Benincasa hispida]	[more]

BLAST of Csor.00g136360 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GGU1	5.08e-175	99.59	uncharacterized protein LOC111454098 OS=Cucurbita moschata OX=3662 GN=LOC1114540...	[more]
A0A6J1KIH2	1.85e-171	98.35	uncharacterized protein LOC111496061 OS=Cucurbita maxima OX=3661 GN=LOC111496061...	[more]
A0A1S3BB06	9.39e-157	86.45	uncharacterized protein LOC103487741 OS=Cucumis melo OX=3656 GN=LOC103487741 PE=...	[more]
A0A6J1BQ55	8.29e-156	86.17	RING-H2 finger protein ATL47-like OS=Momordica charantia OX=3673 GN=LOC111004624...	[more]
A0A5A7V5Q1	2.10e-154	85.10	RING-type domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6...	[more]

BLAST of Csor.00g136360 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G24440.1	7.0e-88	62.45	RING/U-box superfamily protein	[more]
AT1G13195.1	1.8e-83	61.63	RING/U-box superfamily protein	[more]
AT1G13195.2	6.8e-75	61.57	RING/U-box superfamily protein	[more]
AT5G58787.1	4.0e-59	45.34	RING/U-box superfamily protein	[more]
AT5G01520.1	1.5e-58	47.08	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 147..184 e-value: 5.6E-5 score: 32.5
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 146..185 e-value: 1.0E-7 score: 32.2
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 147..185 score: 11.722122
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 117..196 e-value: 2.7E-13 score: 51.1
None	No IPR available	PANTHER	PTHR15315	RING FINGER PROTEIN 41, 151	coord: 5..243
None	No IPR available	PANTHER	PTHR15315:SF35	F21J9.10	coord: 5..243
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 140..191
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 162..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g136360.m01	Csor.00g136360.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016567	protein ubiquitination
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0061630	ubiquitin protein ligase activity