Csor.00g121820 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g121820
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr04: 19480162 .. 19482153 (+)
RNA-Seq ExpressionCsor.00g121820
SyntenyCsor.00g121820
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAAGATTGGAGAGCAGCTTGGATCCACAGATATATTTGCAATGGCCATTTTCCCAATGACTTCCCCAGTAATTGTAGCTGAAGATGAAGAAGAAGATGAATATGGAATGATACAAGTAAGTACACCACGAAAATAGTCATTTTGCAGAATGCACCAGATGGAGGCAATACAATGACAATACTCATTTAAAAAAAATCCTTTTTTGGCTTAGTTGCATACAAGAAGATTTTCCTTTTTTTTTAAACAAATAATTTTAGGTCGGAGTCGACCGATAGCTATTTTATTTTATTTTATTTTCGTTGTTAATGAGTAACCACGTCTTTATTTTGTCATTTACATTTCTTTTATCTGAACACTAATATTTTTAGAATATTATGGATTGAGTTATATTCGTGTTAGGCTATACGGGGCGGTAGATATACATATATAGCTCCTAAGTTAGCAAATTGATTGGCAGAAGCTTGTAGTTCATTAAAAAAAAAAAAAAAAAAATGGTCCAAAGAGTGGAGCACCAACTAATAAGTCAATTGCCAAAATTTTGGTTGAACTATAGATTCAATTCATGAGTTTGAATGGTTATCTATTCAGTCTTCAAGCTTTAATTCCCTCTTTTTAAGTCTTACAATCTTGAAAAGTTCTTAATTAAAATTGTTGAAATGTTATTTCATGCATTTAATGTCATTAATATGGTTGACTAAATGTTTTTAATTTAATTGTTTTGAGTCTAATGGTGAGGAATGTTTATCAAATTGGCTAACACAATATATGCTGCACAAAATTATAATACTATCCATCCGAACATAATATGATACAATGCCACTCTACGTGTACACATGTTATACTCTTTTTTTTTGTCAATTGATGATTCTAATTTCTAGAAAATAATACTCTATGATTGAGTCATAGTTCGTAGTTATATTGTATCTATTAGAGCCTTACAATTGGCTCATCTACAATTTGATATTATAATCCAAAATTTAGAAACATGAAACCATCTAAAATTTTGATCGTATAAAACGGTTAAAATAACTTTTTTTGGTCTCACGGATTTATAAGAATTTAAAATTTTGTTATGCTTAATGAATAATAAACTAACGCAATCAATTTATAAGTTATAAAGTCTAAATTATTAAATAGTAAAAATATATGTAATAGTCAAATGTAATTAAAAAAAATTGGAATTTAAAATATGAAAACTAAATTAGTAGGCATTAAATTTGTTGCCTAAGTTGTTATAACCAAAGTTGGCCTAAATTCAAAATTCCCACCGTTTCTTCGATTTCTTCGGAGATCAACAACCATTTCTCTTCTTTCACCGTTCTTTTCATTTGCGTCGCTGACTGTGCATTTCTGACCGCTGTTCACATTTTTCAATCAGATCGGTGGTTTTCCACCTGTTCGTAGACGTAGATCGGCCGTTTGGAAGGATTTCTCGTTCCAGGTTTTCCTTTCACAGAATTATTTCGCTCTACTTTCCTTTTGCACCAACTGATTTCGCCCATGTTTTCTAATTTCTAACTATGGAGTTTGTCAATTCCTGGTTTTCTTGATGGGACGACCCGAAATTTGTTCCCTGCCGTGATTTATTTTTCCTCAGAATCAGTATTAATGGCATCATTAGTGTTTTTGCCTGTCTTCAAATATTGAGTTTAAATGTGGAGGGCTGTTTCTGCGAGCTGTCTTTTCCAGTTTGGTTGTTGATCTTAGTTATTGCAATGTTGGCGGTTCAAGTGAATTTATAGTGGCTACAAAATTAAGAATGTGAATTGTAGACCAGGGCGACGTCCGGCAATTGTGACCGCGTTTGATGCTTGCCGTATACGTTGTGGTGTCGCTACGACTTTTCTGAAACTCTAGTGTAGACAAGTTGCGAACTCTTTGTTTAATTATTCAACTTTTTGCTTAAGAGGTTGGTTTCTCTCTTTTTTCATCTTTTCAGGCGTGGTTTGACATCAGATTCAAGCTTGGCGTTCTGGAAACTGTAAATTGA

mRNA sequence

ATGAAGATTGGAGAGCAGCTTGGATCCACAGATATATTTGCAATGGCCATTTTCCCAATGACTTCCCCAGTAATTGTAGCTGAAGATGAAGAAGAAGATGAATATGGAATGATACAAATCGGTGGTTTTCCACCTGTTCGTAGACGTAGATCGGCCGTTTGGAAGGATTTCTCGTTCCAGGCGTGGTTTGACATCAGATTCAAGCTTGGCGTTCTGGAAACTGTAAATTGA

Coding sequence (CDS)

ATGAAGATTGGAGAGCAGCTTGGATCCACAGATATATTTGCAATGGCCATTTTCCCAATGACTTCCCCAGTAATTGTAGCTGAAGATGAAGAAGAAGATGAATATGGAATGATACAAATCGGTGGTTTTCCACCTGTTCGTAGACGTAGATCGGCCGTTTGGAAGGATTTCTCGTTCCAGGCGTGGTTTGACATCAGATTCAAGCTTGGCGTTCTGGAAACTGTAAATTGA

Protein sequence

MKIGEQLGSTDIFAMAIFPMTSPVIVAEDEEEDEYGMIQIGGFPPVRRRRSAVWKDFSFQAWFDIRFKLGVLETVN
Homology
[Close]
BLAST of Csor.00g121820 vs. NCBI nr
Match: KAG6602405.1 (hypothetical protein SDJN03_07638, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 161 bits (407), Expect = 6.58e-50
Identity = 76/76 (100.00%), Postives = 76/76 (100.00%), Query Frame = 0 

Query: 1  MKIGEQLGSTDIFAMAIFPMTSPVIVAEDEEEDEYGMIQIGGFPPVRRRRSAVWKDFSFQ 60
          MKIGEQLGSTDIFAMAIFPMTSPVIVAEDEEEDEYGMIQIGGFPPVRRRRSAVWKDFSFQ
Sbjct: 1  MKIGEQLGSTDIFAMAIFPMTSPVIVAEDEEEDEYGMIQIGGFPPVRRRRSAVWKDFSFQ 60

Query: 61 AWFDIRFKLGVLETVN 76
          AWFDIRFKLGVLETVN
Sbjct: 61 AWFDIRFKLGVLETVN 76

The following BLAST results are available for this feature:
BLAST of Csor.00g121820 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g121820 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6602405.16.58e-50100.00hypothetical protein SDJN03_07638, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g121820 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g121820 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g121820.m01Csor.00g121820.m01mRNA