Csor.00g118010 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGCGATTTTTCGCCGCTTTTCACCTTATTTTCCTCATCGGATTCATGTCGTCTGGATCTGAATCTCTCCGATTCGACTTGCAGTCCGGCCACACCAAGTGTATCTCTGAGGACATTAAGCACAACGCCATGTCCGTCGGTAAGTATCACGTTGTTAATCCCAATGAAGGCCAGCCTTTGACTGATGATCGCAAGCTCATTGTTCGGGTATTTTCTTTTTTTTTTTTTCTTTTTTTTGGGAGGATCTCTTGATTTTTTTTTGTTTTTTCGGGGGGTTTTTGGTCGATTTGTGATGCTTGATTTAGGGTTTTGGAATCTGTAGGTGACTTCGGCTACTGGAAATACCTACCATTACTCCGATAAGGTGGAATCGGGGCAATTCGCTTTCGTTGCTGCGGAGGCGGGTGATTTCATGACCTGCTTTTGGGCTCCCGATCACCAGCCTCAGATCACATTGTCCGTGGATTTCGATTGGAGGACGGGTGTGGCTGCCAAGGATTGGTCCAATGTTGCTAAGAAAGGCTCTGTCGATGTAAGTTTTCGCATGTCTATGACAAATGTTGATTGAACTTGGTTCTGTTCGATTATTTGATTGTTTGATTGTTTACGAGGATTTTGATTTGCGCGTTTACCGGAATTTTGAATTCTTTGTCTAGATCTTTCTCCGGATTTGAGGAATTTACTATTCCTTGCTTGTATTAGTTGTATCTCCTTCCTTTAGGCACTCCTTTCAATTGAACGACCTAAAGTTCCTTTCACGTTGCAAACTCCAGGCCATCGTTGACTGCGTTCAGCCTCAGAGTTTTTGTTATCTTTCTAATTATATTTCCAGAAAGTGATCGAATTATGTTTCTTTTGTGGAATTTGCATATATCCAAGAACAGTTGAAGCGCTGATGTAGGGAATTCCAGCTATTCAAACTGTAGGAGCAATTGCACAACATACACAACAAAATCACAAATCATCGTTCAATGTGTGCTAGGATTCTTTAACTGTAGGAGCAGAAATAAAGCAAAAAGCCTAGTGTAGATCTGCTGTTTTTCATAAATTACAGTTAGAACCAAGCTTAGGACACACAGTCTAGGAAGAAAATTACTTTCTTAGTTCTCCTCCAAGAAAAATTGAAAATTTCTTTTCCCAAAAAAATTCTTTTTTCTCTCTATTAACATCTCTAATGAGGTGTGTCCAATTTAGAAGCAGGCGTGGATTTTAATTTTTCTCTTTTAAGATCGTCCTTTCTACCATCATGTAAATCTAGTTGTCTCGTCCGTAGCTTCTTTCATTTTGATGTCTTTGGAACCCGAGACGGTAAAAGAGGTAGGGGATAGTTCATTGGAGATTAGAAACCTGCCCATCTAGGCACCGGTCTCTCCAACATAATGTTTGAGGCTTTATTTTCCACCCTTGGGATTGTTGACACCTCGAAAAGAGGTTTGGGCTTAGCAACATTTGACCAGGATTGTGGTCATATCTAAATTTCCTCTCTTTGGTCCAAGAAAATCCACAATTCTCCTTCCCATGGATGCTTGTGATCATCTTACTATGAAGATTCTTTCTTTGATTTCCTTCGGTATCTCCGAGGTCATTTTGCTAACAAGATTTAGTTCGGGATGTCTTATCCTCTGCATTCCAAGATAATAGGAAAGATCTTTAAATTAATATGATGGCTAAATTTTTTTTCCCTTTTTCCACTCATGGTGTGCACTTGTTTCGCTAAATATAAAGCCACTTTTCTTCATAGTTTGAAAGAAGGCATATTTTGAAAGAAAAAGTTGTAGTAGAGAGCATGAGACATCCTCCCAAACAAAGTTTTCACTCGCCAAGTTTTCTCAGTATTCTTCCTTCTAATGCTGCCAGCAATCTCATTGTCAGATTCTCTCTTAGGAATGAATGCTTCTCTGGACCAATTTTAACAGTTCACTTGACAAGGACGTTCAGCACCATTATTGTTGCTATTAGAGTTCTACATTATTTAGAAGATTTATGGGTTGTGCCTATATTCACATGACATAAGTGGAGTTGGGTTCAAAATTCTTGAGTGAATAGTACCGTACCAATCTAGAGACATGGGTTGTAACGGCCTAAGCTCACCGCTAACTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTCGGGCTTTCCCTCAAGGTTTTTAAAACGCGTTTGCTAGGGAGAGGTTTCCACACCCTTATAAAGAATTCTTCGTTCTCCTTTCTAACCGATGTGGAAACTCACAATCCACCCCCTTCGGGGCTCAGTCTCCTCGTTGGCACATTGTCCGATGTCTAGCTCTGATACCATTTGTAACGGCCTAAGCCTACCGCTAGCAGATATTGTCCTCTTTGGGCTTTCCCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACCTTTATAAAGAATGCTTCGTTCTCCTCCCCAACCGATGCGGGATCTCACATGGGTCCTAAAAAGTGTCATCAAGCTTGTGGTCTAGACTTGACTGTTTGAATGAAAGTCTCCCACTATTGGTGCGAGTTCTTTTGTGGCATGACATCTGATTTGGTGTAGGAAATTTCTTTCCCCTCCTGTTCTAATTTGCTTATCTGTTAACTTTTTAAAATGGTCCATTCATACACCAACTCTAGTAATGTCTTATGTTGGTGAAGTACTCTGCTATTAGCGTCATTAGACCAAATAACACTTGGAAACAGAAAACAATCTATAGAAGTTCGAATTATGTTGGCCGAATATTTGGTGAGGGTATTTCGATTCAACTAGGTAATAACAAATTCAGAAATCTTAATGCAGTACCCCACGTAGAAAACTACCATTTGAATTGGGTCGGTTGATTTTTTGGAGTTGTTGAATTGAAATACCCTCACCAAAAATAAAGTGGGGAGGAACTGAATTATGATGGCCACCTAATTTCTTTACTTTTTCCATAATTTTGCTACAACGACATCAAAATTGTGTCGAATCTCTGCAATTATCAAGTTTTGGACTCACTGGAACACACACAAGCTTACTATTCATCAAGTTTTGAACCCACTGGAACACAAACTCACTTGGGACTCGATGAATGCTGCTTGTTTTTTTCAATTCTAATAAATGGCTGTGAGTTGTTTTCCCAATCTCATGTGGCTATGTCAATAACGATTCTCTTACAATGTCAGGCCATGGAATTAGAGCTTCAGAAGTTGTTTGACACAGCCAATTCTATTCAAGAAGAGATGAATTATCTCCGTGAAAGGTAAAACAGAATCATGCATTCTACTTCTTTGCCCCCACTCCATTCCCCCATTTAGGAATTGAGATTACTCGTTCTCACTTGTTCTCAACCATGTTCGATACAAGTCTTTTCGCTGACCCCGGCCTCCGTTACTCATGGACGTCCTCGTTAATGGTCTGAAACCGCGAACAATCTGTGATTGCAGGGAGGACGAGATGCAAGATCTGAACAGAAGTACAAACACAAAGATGGCATGGTTGAGTTTGCTTTCGCTTTTTGTTTGCTTATCAGTGGCAGGATTGCAACTATGGCATTTGAAGTCCTTTTTCGAGAAAAAGAAGCTCATTTAA ATGGTGCGATTTTTCGCCGCTTTTCACCTTATTTTCCTCATCGGATTCATGTCGTCTGGATCTGAATCTCTCCGATTCGACTTGCAGTCCGGCCACACCAAGTGTATCTCTGAGGACATTAAGCACAACGCCATGTCCGTCGGTAAGTATCACGTTGTTAATCCCAATGAAGGCCAGCCTTTGACTGATGATCGCAAGCTCATTGTTCGGGTGACTTCGGCTACTGGAAATACCTACCATTACTCCGATAAGGTGGAATCGGGGCAATTCGCTTTCGTTGCTGCGGAGGCGGGTGATTTCATGACCTGCTTTTGGGCTCCCGATCACCAGCCTCAGATCACATTGTCCGTGGATTTCGATTGGAGGACGGGTGTGGCTGCCAAGGATTGGTCCAATGTTGCTAAGAAAGGCTCTGTCGATGCCATGGAATTAGAGCTTCAGAAGTTGTTTGACACAGCCAATTCTATTCAAGAAGAGATGAATTATCTCCGTGAAAGGGAGGACGAGATGCAAGATCTGAACAGAAGTACAAACACAAAGATGGCATGGTTGAGTTTGCTTTCGCTTTTTGTTTGCTTATCAGTGGCAGGATTGCAACTATGGCATTTGAAGTCCTTTTTCGAGAAAAAGAAGCTCATTTAA ATGGTGCGATTTTTCGCCGCTTTTCACCTTATTTTCCTCATCGGATTCATGTCGTCTGGATCTGAATCTCTCCGATTCGACTTGCAGTCCGGCCACACCAAGTGTATCTCTGAGGACATTAAGCACAACGCCATGTCCGTCGGTAAGTATCACGTTGTTAATCCCAATGAAGGCCAGCCTTTGACTGATGATCGCAAGCTCATTGTTCGGGTGACTTCGGCTACTGGAAATACCTACCATTACTCCGATAAGGTGGAATCGGGGCAATTCGCTTTCGTTGCTGCGGAGGCGGGTGATTTCATGACCTGCTTTTGGGCTCCCGATCACCAGCCTCAGATCACATTGTCCGTGGATTTCGATTGGAGGACGGGTGTGGCTGCCAAGGATTGGTCCAATGTTGCTAAGAAAGGCTCTGTCGATGCCATGGAATTAGAGCTTCAGAAGTTGTTTGACACAGCCAATTCTATTCAAGAAGAGATGAATTATCTCCGTGAAAGGGAGGACGAGATGCAAGATCTGAACAGAAGTACAAACACAAAGATGGCATGGTTGAGTTTGCTTTCGCTTTTTGTTTGCTTATCAGTGGCAGGATTGCAACTATGGCATTTGAAGTCCTTTTTCGAGAAAAAGAAGCTCATTTAA MVRFFAAFHLIFLIGFMSSGSESLRFDLQSGHTKCISEDIKHNAMSVGKYHVVNPNEGQPLTDDRKLIVRVTSATGNTYHYSDKVESGQFAFVAAEAGDFMTCFWAPDHQPQITLSVDFDWRTGVAAKDWSNVAKKGSVDAMELELQKLFDTANSIQEEMNYLREREDEMQDLNRSTNTKMAWLSLLSLFVCLSVAGLQLWHLKSFFEKKKLI Homology
BLAST of Csor.00g118010 vs. ExPASy Swiss-Prot
Match: Q9LQY3 (Transmembrane emp24 domain-containing protein p24delta9 OS=Arabidopsis thaliana OX=3702 GN=At1g26690 PE=2 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 2.4e-73 Identity = 129/204 (63.24%), Postives = 164/204 (80.39%), Query Frame = 0
BLAST of Csor.00g118010 vs. ExPASy Swiss-Prot
Match: Q8VY92 (Transmembrane emp24 domain-containing protein p24delta10 OS=Arabidopsis thaliana OX=3702 GN=At1g69460 PE=1 SV=1) HSP 1 Score: 272.7 bits (696), Expect = 3.5e-72 Identity = 126/204 (61.76%), Postives = 164/204 (80.39%), Query Frame = 0
BLAST of Csor.00g118010 vs. ExPASy Swiss-Prot
Match: Q8GYG1 (Transmembrane emp24 domain-containing protein p24delta7 OS=Arabidopsis thaliana OX=3702 GN=At1g14010 PE=2 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 4.3e-70 Identity = 123/204 (60.29%), Postives = 160/204 (78.43%), Query Frame = 0
BLAST of Csor.00g118010 vs. ExPASy Swiss-Prot
Match: O81045 (Transmembrane emp24 domain-containing protein p24delta8 OS=Arabidopsis thaliana OX=3702 GN=At2g03290 PE=1 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 3.2e-65 Identity = 121/205 (59.02%), Postives = 155/205 (75.61%), Query Frame = 0
BLAST of Csor.00g118010 vs. ExPASy Swiss-Prot
Match: Q9LJV9 (Transmembrane emp24 domain-containing protein p24delta11 OS=Arabidopsis thaliana OX=3702 GN=At3g29070 PE=2 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 7.6e-59 Identity = 109/192 (56.77%), Postives = 145/192 (75.52%), Query Frame = 0
BLAST of Csor.00g118010 vs. NCBI nr
Match: KAG6585859.1 (Transmembrane emp24 domain-containing protein p24delta9, partial [Cucurbita argyrosperma subsp. sororia] >KAG7020765.1 Transmembrane emp24 domain-containing protein p24delta9 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 427 bits (1098), Expect = 7.42e-151 Identity = 213/213 (100.00%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Csor.00g118010 vs. NCBI nr
Match: XP_022952003.1 (transmembrane emp24 domain-containing protein p24delta9-like [Cucurbita moschata]) HSP 1 Score: 427 bits (1097), Expect = 1.05e-150 Identity = 212/213 (99.53%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Csor.00g118010 vs. NCBI nr
Match: XP_023536667.1 (transmembrane emp24 domain-containing protein p24delta9-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 424 bits (1089), Expect = 1.75e-149 Identity = 210/213 (98.59%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Csor.00g118010 vs. NCBI nr
Match: XP_022973302.1 (transmembrane emp24 domain-containing protein p24delta9-like [Cucurbita maxima]) HSP 1 Score: 423 bits (1087), Expect = 3.53e-149 Identity = 209/213 (98.12%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Csor.00g118010 vs. NCBI nr
Match: KAA0066595.1 (transmembrane emp24 domain-containing protein p24delta9-like [Cucumis melo var. makuwa]) HSP 1 Score: 392 bits (1007), Expect = 5.56e-137 Identity = 193/213 (90.61%), Postives = 203/213 (95.31%), Query Frame = 0
BLAST of Csor.00g118010 vs. ExPASy TrEMBL
Match: A0A6J1GJ98 (transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita moschata OX=3662 GN=LOC111454720 PE=3 SV=1) HSP 1 Score: 427 bits (1097), Expect = 5.11e-151 Identity = 212/213 (99.53%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Csor.00g118010 vs. ExPASy TrEMBL
Match: A0A6J1I761 (transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita maxima OX=3661 GN=LOC111471862 PE=3 SV=1) HSP 1 Score: 423 bits (1087), Expect = 1.71e-149 Identity = 209/213 (98.12%), Postives = 213/213 (100.00%), Query Frame = 0
BLAST of Csor.00g118010 vs. ExPASy TrEMBL
Match: A0A5A7VLH4 (Transmembrane emp24 domain-containing protein p24delta9-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold979G00010 PE=3 SV=1) HSP 1 Score: 392 bits (1007), Expect = 2.69e-137 Identity = 193/213 (90.61%), Postives = 203/213 (95.31%), Query Frame = 0
BLAST of Csor.00g118010 vs. ExPASy TrEMBL
Match: A0A1S3CPY8 (transmembrane emp24 domain-containing protein p24delta9-like OS=Cucumis melo OX=3656 GN=LOC103503362 PE=3 SV=1) HSP 1 Score: 387 bits (995), Expect = 3.33e-135 Identity = 190/210 (90.48%), Postives = 200/210 (95.24%), Query Frame = 0
BLAST of Csor.00g118010 vs. ExPASy TrEMBL
Match: A0A6J1KG82 (transmembrane emp24 domain-containing protein p24delta9-like OS=Cucurbita maxima OX=3661 GN=LOC111493615 PE=3 SV=1) HSP 1 Score: 364 bits (935), Expect = 2.53e-126 Identity = 179/213 (84.04%), Postives = 194/213 (91.08%), Query Frame = 0
BLAST of Csor.00g118010 vs. TAIR 10
Match: AT1G26690.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 276.6 bits (706), Expect = 1.7e-74 Identity = 129/204 (63.24%), Postives = 164/204 (80.39%), Query Frame = 0
BLAST of Csor.00g118010 vs. TAIR 10
Match: AT1G69460.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 272.7 bits (696), Expect = 2.5e-73 Identity = 126/204 (61.76%), Postives = 164/204 (80.39%), Query Frame = 0
BLAST of Csor.00g118010 vs. TAIR 10
Match: AT1G14010.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 265.8 bits (678), Expect = 3.0e-71 Identity = 123/204 (60.29%), Postives = 160/204 (78.43%), Query Frame = 0
BLAST of Csor.00g118010 vs. TAIR 10
Match: AT2G03290.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 249.6 bits (636), Expect = 2.3e-66 Identity = 121/205 (59.02%), Postives = 155/205 (75.61%), Query Frame = 0
BLAST of Csor.00g118010 vs. TAIR 10
Match: AT3G29070.1 (emp24/gp25L/p24 family/GOLD family protein ) HSP 1 Score: 228.4 bits (581), Expect = 5.4e-60 Identity = 109/192 (56.77%), Postives = 145/192 (75.52%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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