Csor.00g114620 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATCCCCCATCTCCCTTTGTATGTAGTTCTGCACAGTGGGAGGGAGATGGCAAGAAACCCGAAGATTCTACGTACAGATGAGGAGGTGGAGTGAGACAAAAATGAGATTATTGGTTAAATAGAAAAAGTAAAAGAACGTGTGAGAGCAATAAGGCCTAAAAATCCTTTAAAGTTATCAAGAATCAAGTTCCTCCACTTTGCCTGATGAAGAAGACAAATCAATGGATAAGATGGCAAAACTCTGATTTGATTGATCGGTACCAGAGTTTCTGGTTTACTGCGTCTGTATCCATAGACAACATTCTTTACTAATTTGATTAAAAGTCAAGCTTAGAAGGAAAACAAATCTCTACTTCCTCAACTTTTAATTATACTAACAATTTGACTAAAACACAGACAGGATTTCCTGCAACAGCATCTTTCTGCTAAATTCATAACGGAGAAAAGGTTTGAATCGTTATAATCCTTTCCAAGCAAGAATGTTCAAAAGGAAGTTTATTCCTTGCTTTTCAAAAGAATGAATCTTTAGGAACCGAAAAGAATTATTAAAACGCTTAGTGGAACATTAAATATGTTTATGCCCGTGAAAGAGGTAAAGACCGAGGACATACCGTTGAACATAGTCAGCTTCCTTCGTTACTTTTGCCGCAACAATATTCGATACTGATATGTCTTTGTAGGCTCTCTGCCCACTGCAACAGCTATTAGTTCTCCCTCCCTTTTTCTCTCCCCTTCTCCTTCTCTGTCTTTATCGCTGTAGTTGATGGAATTTGAGCATTCCAACATGACTCCAAGGAGAAAAGGCCGATCATCGTAGAGGCTCAGCAGAAACTGCGAAGCTTCATTGGAAGGCCAAAAGATTACGCTTTGCCCTTTCTCTTATTACTCGTTACTCCTGTATACAAAAAGGTGAATCTTCTTTTGTTGTTTTAGTTCTGACACTCCTGCATAAACCTCATTGCAACTCTTGATGTTTGTCTCTGTGTCTGTGAATCCTTTATAATCTTCCTCAAATACCCAGAAAATATCGCACCCTGCTCTTCATTTCAAGACATTTTTGGGATTAGCAGCAGCAATTTTAGAGTATAGAAATTGACGCTGTATAAATGGGATTGGTGGGAGGCATAGAATGGATGAATGCTTACAGTAGGAAGCAATTCAGGAAACTGTTCTGGAGGATGAGAGCAGCGATGAAGAAAGCCATCAAGAACGGAGGAAAAAGAAGGTTCAATTTTCAATATGATCCTTGCAGCTATGCTCTAAATTTTGATGATGGGTTTTGCAAATTTGAAGCTGTTGCACCTGAAGAACCTGCAAAGATTCAGATTAGCTCAAATTTGAATCACTCTCCCATGTGGGTTTTTGTACTTCTGGTGAAATCTGAGTGA ATGATCCCCCATCTCCCTTTGTATGTAGTTCTGCACAGTGGGAGGGAGATGGCAAGAAACCCGAAGATTCTACGTACAGATGAGGAGGAGAAAAGGCCGATCATCGTAGAGGCTCAGCAGAAACTGCGAAGCTTCATTGGAAGGCCAAAAGATTACGCTTTGCCCTTTCTCTTATTACTCGTTACTCCTGTATACAAAAAGAAAATATCGCACCCTGCTCTTCATTTCAAGACATTTTTGGGATTAGCAGCAGCAATTTTAGATAGGAAGCAATTCAGGAAACTGTTCTGGAGGATGAGAGCAGCGATGAAGAAAGCCATCAAGAACGGAGGAAAAAGAAGGTTCAATTTTCAATATGATCCTTGCAGCTATGCTCTAAATTTTGATGATGGGTTTTGCAAATTTGAAGCTGTTGCACCTGAAGAACCTGCAAAGATTCAGATTAGCTCAAATTTGAATCACTCTCCCATGTGGGTTTTTGTACTTCTGGTGAAATCTGAGTGA ATGATCCCCCATCTCCCTTTGTATGTAGTTCTGCACAGTGGGAGGGAGATGGCAAGAAACCCGAAGATTCTACGTACAGATGAGGAGGAGAAAAGGCCGATCATCGTAGAGGCTCAGCAGAAACTGCGAAGCTTCATTGGAAGGCCAAAAGATTACGCTTTGCCCTTTCTCTTATTACTCGTTACTCCTGTATACAAAAAGAAAATATCGCACCCTGCTCTTCATTTCAAGACATTTTTGGGATTAGCAGCAGCAATTTTAGATAGGAAGCAATTCAGGAAACTGTTCTGGAGGATGAGAGCAGCGATGAAGAAAGCCATCAAGAACGGAGGAAAAAGAAGGTTCAATTTTCAATATGATCCTTGCAGCTATGCTCTAAATTTTGATGATGGGTTTTGCAAATTTGAAGCTGTTGCACCTGAAGAACCTGCAAAGATTCAGATTAGCTCAAATTTGAATCACTCTCCCATGTGGGTTTTTGTACTTCTGGTGAAATCTGAGTGA MIPHLPLYVVLHSGREMARNPKILRTDEEEKRPIIVEAQQKLRSFIGRPKDYALPFLLLLVTPVYKKKISHPALHFKTFLGLAAAILDRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCKFEAVAPEEPAKIQISSNLNHSPMWVFVLLVKSE Homology
BLAST of Csor.00g114620 vs. NCBI nr
Match: KAG6594620.1 (hypothetical protein SDJN03_11173, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 339 bits (870), Expect = 1.30e-117 Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0
BLAST of Csor.00g114620 vs. NCBI nr
Match: KAF3451534.1 (hypothetical protein FNV43_RR07629 [Rhamnella rubrinervis]) HSP 1 Score: 95.5 bits (236), Expect = 3.89e-22 Identity = 53/97 (54.64%), Postives = 68/97 (70.10%), Query Frame = 0
BLAST of Csor.00g114620 vs. NCBI nr
Match: PRQ28852.1 (hypothetical protein RchiOBHm_Chr5g0007481 [Rosa chinensis]) HSP 1 Score: 89.7 bits (221), Expect = 6.88e-20 Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 0
BLAST of Csor.00g114620 vs. NCBI nr
Match: KAA0056955.1 (putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa] >TYK26382.1 putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa]) HSP 1 Score: 87.8 bits (216), Expect = 7.08e-19 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Csor.00g114620 vs. NCBI nr
Match: KGN64641.1 (hypothetical protein Csa_013386 [Cucumis sativus]) HSP 1 Score: 87.0 bits (214), Expect = 7.55e-19 Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of Csor.00g114620 vs. ExPASy TrEMBL
Match: A0A2P6Q3U6 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0007481 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 3.33e-20 Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 0
BLAST of Csor.00g114620 vs. ExPASy TrEMBL
Match: A0A5D3DSE1 (Putative Glucose-fructose oxidoreductase domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00440 PE=4 SV=1) HSP 1 Score: 87.8 bits (216), Expect = 3.43e-19 Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Csor.00g114620 vs. ExPASy TrEMBL
Match: A0A0A0LXB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073010 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 3.66e-19 Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0
BLAST of Csor.00g114620 vs. ExPASy TrEMBL
Match: A0A2C9U8B6 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G023500 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.92e-17 Identity = 43/80 (53.75%), Postives = 55/80 (68.75%), Query Frame = 0
BLAST of Csor.00g114620 vs. ExPASy TrEMBL
Match: A0A6J5WX94 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24985 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 3.46e-17 Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 0
BLAST of Csor.00g114620 vs. TAIR 10
Match: AT1G11112.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05 Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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