Csor.00g114620 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g114620
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr07: 1243630 .. 1245019 (-)
RNA-Seq ExpressionCsor.00g114620
SyntenyCsor.00g114620
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCCCCCATCTCCCTTTGTATGTAGTTCTGCACAGTGGGAGGGAGATGGCAAGAAACCCGAAGATTCTACGTACAGATGAGGAGGTGGAGTGAGACAAAAATGAGATTATTGGTTAAATAGAAAAAGTAAAAGAACGTGTGAGAGCAATAAGGCCTAAAAATCCTTTAAAGTTATCAAGAATCAAGTTCCTCCACTTTGCCTGATGAAGAAGACAAATCAATGGATAAGATGGCAAAACTCTGATTTGATTGATCGGTACCAGAGTTTCTGGTTTACTGCGTCTGTATCCATAGACAACATTCTTTACTAATTTGATTAAAAGTCAAGCTTAGAAGGAAAACAAATCTCTACTTCCTCAACTTTTAATTATACTAACAATTTGACTAAAACACAGACAGGATTTCCTGCAACAGCATCTTTCTGCTAAATTCATAACGGAGAAAAGGTTTGAATCGTTATAATCCTTTCCAAGCAAGAATGTTCAAAAGGAAGTTTATTCCTTGCTTTTCAAAAGAATGAATCTTTAGGAACCGAAAAGAATTATTAAAACGCTTAGTGGAACATTAAATATGTTTATGCCCGTGAAAGAGGTAAAGACCGAGGACATACCGTTGAACATAGTCAGCTTCCTTCGTTACTTTTGCCGCAACAATATTCGATACTGATATGTCTTTGTAGGCTCTCTGCCCACTGCAACAGCTATTAGTTCTCCCTCCCTTTTTCTCTCCCCTTCTCCTTCTCTGTCTTTATCGCTGTAGTTGATGGAATTTGAGCATTCCAACATGACTCCAAGGAGAAAAGGCCGATCATCGTAGAGGCTCAGCAGAAACTGCGAAGCTTCATTGGAAGGCCAAAAGATTACGCTTTGCCCTTTCTCTTATTACTCGTTACTCCTGTATACAAAAAGGTGAATCTTCTTTTGTTGTTTTAGTTCTGACACTCCTGCATAAACCTCATTGCAACTCTTGATGTTTGTCTCTGTGTCTGTGAATCCTTTATAATCTTCCTCAAATACCCAGAAAATATCGCACCCTGCTCTTCATTTCAAGACATTTTTGGGATTAGCAGCAGCAATTTTAGAGTATAGAAATTGACGCTGTATAAATGGGATTGGTGGGAGGCATAGAATGGATGAATGCTTACAGTAGGAAGCAATTCAGGAAACTGTTCTGGAGGATGAGAGCAGCGATGAAGAAAGCCATCAAGAACGGAGGAAAAAGAAGGTTCAATTTTCAATATGATCCTTGCAGCTATGCTCTAAATTTTGATGATGGGTTTTGCAAATTTGAAGCTGTTGCACCTGAAGAACCTGCAAAGATTCAGATTAGCTCAAATTTGAATCACTCTCCCATGTGGGTTTTTGTACTTCTGGTGAAATCTGAGTGA

mRNA sequence

ATGATCCCCCATCTCCCTTTGTATGTAGTTCTGCACAGTGGGAGGGAGATGGCAAGAAACCCGAAGATTCTACGTACAGATGAGGAGGAGAAAAGGCCGATCATCGTAGAGGCTCAGCAGAAACTGCGAAGCTTCATTGGAAGGCCAAAAGATTACGCTTTGCCCTTTCTCTTATTACTCGTTACTCCTGTATACAAAAAGAAAATATCGCACCCTGCTCTTCATTTCAAGACATTTTTGGGATTAGCAGCAGCAATTTTAGATAGGAAGCAATTCAGGAAACTGTTCTGGAGGATGAGAGCAGCGATGAAGAAAGCCATCAAGAACGGAGGAAAAAGAAGGTTCAATTTTCAATATGATCCTTGCAGCTATGCTCTAAATTTTGATGATGGGTTTTGCAAATTTGAAGCTGTTGCACCTGAAGAACCTGCAAAGATTCAGATTAGCTCAAATTTGAATCACTCTCCCATGTGGGTTTTTGTACTTCTGGTGAAATCTGAGTGA

Coding sequence (CDS)

ATGATCCCCCATCTCCCTTTGTATGTAGTTCTGCACAGTGGGAGGGAGATGGCAAGAAACCCGAAGATTCTACGTACAGATGAGGAGGAGAAAAGGCCGATCATCGTAGAGGCTCAGCAGAAACTGCGAAGCTTCATTGGAAGGCCAAAAGATTACGCTTTGCCCTTTCTCTTATTACTCGTTACTCCTGTATACAAAAAGAAAATATCGCACCCTGCTCTTCATTTCAAGACATTTTTGGGATTAGCAGCAGCAATTTTAGATAGGAAGCAATTCAGGAAACTGTTCTGGAGGATGAGAGCAGCGATGAAGAAAGCCATCAAGAACGGAGGAAAAAGAAGGTTCAATTTTCAATATGATCCTTGCAGCTATGCTCTAAATTTTGATGATGGGTTTTGCAAATTTGAAGCTGTTGCACCTGAAGAACCTGCAAAGATTCAGATTAGCTCAAATTTGAATCACTCTCCCATGTGGGTTTTTGTACTTCTGGTGAAATCTGAGTGA

Protein sequence

MIPHLPLYVVLHSGREMARNPKILRTDEEEKRPIIVEAQQKLRSFIGRPKDYALPFLLLLVTPVYKKKISHPALHFKTFLGLAAAILDRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCKFEAVAPEEPAKIQISSNLNHSPMWVFVLLVKSE
Homology
BLAST of Csor.00g114620 vs. NCBI nr
Match: KAG6594620.1 (hypothetical protein SDJN03_11173, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 339 bits (870), Expect = 1.30e-117
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0

Query: 1   MIPHLPLYVVLHSGREMARNPKILRTDEEEKRPIIVEAQQKLRSFIGRPKDYALPFLLLL 60
           MIPHLPLYVVLHSGREMARNPKILRTDEEEKRPIIVEAQQKLRSFIGRPKDYALPFLLLL
Sbjct: 1   MIPHLPLYVVLHSGREMARNPKILRTDEEEKRPIIVEAQQKLRSFIGRPKDYALPFLLLL 60

Query: 61  VTPVYKKKISHPALHFKTFLGLAAAILDRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYD 120
           VTPVYKKKISHPALHFKTFLGLAAAILDRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYD
Sbjct: 61  VTPVYKKKISHPALHFKTFLGLAAAILDRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYD 120

Query: 121 PCSYALNFDDGFCKFEAVAPEEPAKIQISSNLNHSPMWVFVLLVKSE 167
           PCSYALNFDDGFCKFEAVAPEEPAKIQISSNLNHSPMWVFVLLVKSE
Sbjct: 121 PCSYALNFDDGFCKFEAVAPEEPAKIQISSNLNHSPMWVFVLLVKSE 167

BLAST of Csor.00g114620 vs. NCBI nr
Match: KAF3451534.1 (hypothetical protein FNV43_RR07629 [Rhamnella rubrinervis])

HSP 1 Score: 95.5 bits (236), Expect = 3.89e-22
Identity = 53/97 (54.64%), Postives = 68/97 (70.10%), Query Frame = 0

Query: 78  TFLGLAAAIL-----DRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGF 137
           T +GL A+++      RK  R LFWR+RAA+KKA+KNGGK++  FQYDPCSYALNFDDG 
Sbjct: 3   TNMGLIASLVWVNTYSRKHCRSLFWRVRAALKKAVKNGGKQQIRFQYDPCSYALNFDDGG 62

Query: 138 CKF-EA-VAPEEPAKIQISSNLNHSPMWVFVLLVKSE 167
           CK  EA   P + AK Q  S+  +S  WV+VL VK++
Sbjct: 63  CKLGEAQTTPSQHAKHQCHSDTKNSK-WVYVLWVKAD 98

BLAST of Csor.00g114620 vs. NCBI nr
Match: PRQ28852.1 (hypothetical protein RchiOBHm_Chr5g0007481 [Rosa chinensis])

HSP 1 Score: 89.7 bits (221), Expect = 6.88e-20
Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 0

Query: 87  LDRKQFRKLFWRMRAAMKKAIKNGGK-RRFNFQYDPCSYALNFDDGFCKFE--AVAPEEP 146
           + RK+ R LFWRMRAA+K+A+KN GK RRF FQYDP SYALNFDDG  K          P
Sbjct: 15  IGRKKCRSLFWRMRAALKRAMKNSGKQRRFMFQYDPSSYALNFDDGCWKLGEGGACALRP 74

Query: 147 AKIQISSNLNHSPMWVFVLLVKSE 167
           AK+Q  S++N++ +WV VLLVKSE
Sbjct: 75  AKLQEHSDINNT-LWVCVLLVKSE 97

BLAST of Csor.00g114620 vs. NCBI nr
Match: KAA0056955.1 (putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa] >TYK26382.1 putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis melo var. makuwa])

HSP 1 Score: 87.8 bits (216), Expect = 7.08e-19
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0

Query: 89  RKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCKFEAVAPEE-PAKIQ 148
           +KQ R LFW+M+AA+KKAIKNG KR+  FQYDP SYALNFDDG  K      E    ++Q
Sbjct: 40  KKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGHSKIREDNVEAYKFEVQ 99

Query: 149 ISSNLNHSPMWVFVLLVKSE 167
              N+ +S  WV+VL VKSE
Sbjct: 100 YCGNVYNSATWVYVLWVKSE 119

BLAST of Csor.00g114620 vs. NCBI nr
Match: KGN64641.1 (hypothetical protein Csa_013386 [Cucumis sativus])

HSP 1 Score: 87.0 bits (214), Expect = 7.55e-19
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0

Query: 89  RKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCKF-EAVAPEEPAKIQ 148
           +KQ R LFW+++AA+KKAIKNG KR+  FQYDP SYALNFDDG  +  E        ++Q
Sbjct: 17  KKQCRSLFWKVKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGHSEIREDNVDAYKFEVQ 76

Query: 149 ISSNLNHSPMWVFVLLVKSE 167
              N+ +S MWV+VL VKSE
Sbjct: 77  YCGNVYNSAMWVYVLWVKSE 96

BLAST of Csor.00g114620 vs. ExPASy TrEMBL
Match: A0A2P6Q3U6 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0007481 PE=4 SV=1)

HSP 1 Score: 89.7 bits (221), Expect = 3.33e-20
Identity = 50/84 (59.52%), Postives = 61/84 (72.62%), Query Frame = 0

Query: 87  LDRKQFRKLFWRMRAAMKKAIKNGGK-RRFNFQYDPCSYALNFDDGFCKFE--AVAPEEP 146
           + RK+ R LFWRMRAA+K+A+KN GK RRF FQYDP SYALNFDDG  K          P
Sbjct: 15  IGRKKCRSLFWRMRAALKRAMKNSGKQRRFMFQYDPSSYALNFDDGCWKLGEGGACALRP 74

Query: 147 AKIQISSNLNHSPMWVFVLLVKSE 167
           AK+Q  S++N++ +WV VLLVKSE
Sbjct: 75  AKLQEHSDINNT-LWVCVLLVKSE 97

BLAST of Csor.00g114620 vs. ExPASy TrEMBL
Match: A0A5D3DSE1 (Putative Glucose-fructose oxidoreductase domain-containing protein 2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold861G00440 PE=4 SV=1)

HSP 1 Score: 87.8 bits (216), Expect = 3.43e-19
Identity = 45/80 (56.25%), Postives = 55/80 (68.75%), Query Frame = 0

Query: 89  RKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCKFEAVAPEE-PAKIQ 148
           +KQ R LFW+M+AA+KKAIKNG KR+  FQYDP SYALNFDDG  K      E    ++Q
Sbjct: 40  KKQCRSLFWKMKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGHSKIREDNVEAYKFEVQ 99

Query: 149 ISSNLNHSPMWVFVLLVKSE 167
              N+ +S  WV+VL VKSE
Sbjct: 100 YCGNVYNSATWVYVLWVKSE 119

BLAST of Csor.00g114620 vs. ExPASy TrEMBL
Match: A0A0A0LXB8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073010 PE=4 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 3.66e-19
Identity = 44/80 (55.00%), Postives = 56/80 (70.00%), Query Frame = 0

Query: 89  RKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCKF-EAVAPEEPAKIQ 148
           +KQ R LFW+++AA+KKAIKNG KR+  FQYDP SYALNFDDG  +  E        ++Q
Sbjct: 17  KKQCRSLFWKVKAALKKAIKNGNKRQLKFQYDPSSYALNFDDGHSEIREDNVDAYKFEVQ 76

Query: 149 ISSNLNHSPMWVFVLLVKSE 167
              N+ +S MWV+VL VKSE
Sbjct: 77  YCGNVYNSAMWVYVLWVKSE 96

BLAST of Csor.00g114620 vs. ExPASy TrEMBL
Match: A0A2C9U8B6 (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G023500 PE=4 SV=1)

HSP 1 Score: 82.4 bits (202), Expect = 1.92e-17
Identity = 43/80 (53.75%), Postives = 55/80 (68.75%), Query Frame = 0

Query: 88  DRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCKFEAVAPE-EPAKI 147
            +KQ + LFWR++AA+KKA+KNGGK++ NFQYDP SYALNFDDG C F     E  P K 
Sbjct: 14  SKKQCKSLFWRVKAAVKKAVKNGGKQQVNFQYDPSSYALNFDDGCCHFGREKYEVRPRK- 73

Query: 148 QISSNLNHSPMWVFVLLVKS 166
              S   +  +WV+VL V+S
Sbjct: 74  ---SEDGNKTIWVYVLWVES 89

BLAST of Csor.00g114620 vs. ExPASy TrEMBL
Match: A0A6J5WX94 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24985 PE=4 SV=1)

HSP 1 Score: 82.0 bits (201), Expect = 3.46e-17
Identity = 47/98 (47.96%), Postives = 63/98 (64.29%), Query Frame = 0

Query: 80  LGLAAAIL-----DRKQFRKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDGFCK 139
           +GL  +++      R+Q R LFWRMRAA+KKA+KN GK++  FQYDP SYALNFDDG  K
Sbjct: 1   MGLVGSLVWVNAYSRRQCRSLFWRMRAALKKALKNSGKQQLRFQYDPSSYALNFDDGSWK 60

Query: 140 F----EAVAPEEPAKIQISSNLN-HSPMWVFVLLVKSE 167
                 A+  +   K Q+ S+L+  +  WV+VL V SE
Sbjct: 61  SAQEANALKLKHATKPQLHSDLDVKNTAWVYVLWVVSE 98

BLAST of Csor.00g114620 vs. TAIR 10
Match: AT1G11112.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 47.0 bits (110), Expect = 1.7e-05
Identity = 24/39 (61.54%), Postives = 30/39 (76.92%), Query Frame = 0

Query: 93  RKLFWRMRAAMKKAIKNGGKRRFNFQYDPCSYALNFDDG 132
           +K+F RM+AA+KK  K   K++  FQYDP SYALNFDDG
Sbjct: 15  KKMFRRMKAAVKKTKK---KKQTMFQYDPWSYALNFDDG 50

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6594620.11.30e-117100.00hypothetical protein SDJN03_11173, partial [Cucurbita argyrosperma subsp. sorori... [more]
KAF3451534.13.89e-2254.64hypothetical protein FNV43_RR07629 [Rhamnella rubrinervis][more]
PRQ28852.16.88e-2059.52hypothetical protein RchiOBHm_Chr5g0007481 [Rosa chinensis][more]
KAA0056955.17.08e-1956.25putative Glucose-fructose oxidoreductase domain-containing protein 2 [Cucumis me... [more]
KGN64641.17.55e-1955.00hypothetical protein Csa_013386 [Cucumis sativus][more]
Match NameE-valueIdentityDescription
A0A2P6Q3U63.33e-2059.52Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0007481 PE=4... [more]
A0A5D3DSE13.43e-1956.25Putative Glucose-fructose oxidoreductase domain-containing protein 2 OS=Cucumis ... [more]
A0A0A0LXB83.66e-1955.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G073010 PE=4 SV=1[more]
A0A2C9U8B61.92e-1753.75Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_16G023500 PE=4 SV=... [more]
A0A6J5WX943.46e-1747.96Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS24985 PE=4 S... [more]
Match NameE-valueIdentityDescription
AT1G11112.11.7e-0561.54unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR34538EXPRESSED PROTEINcoord: 88..166
NoneNo IPR availablePANTHERPTHR34538:SF10OXIDOREDUCTASE DOMAIN-CONTAINING PROTEIN 2, PUTATIVE-RELATEDcoord: 88..166

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g114620.m01Csor.00g114620.m01mRNA