Csor.00g102400 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCCGGTGTTTGGGTGTTCGACAAAAATGGCGTGGCCCGTTTAATATCGAACCCAACCAGGGAGTCGTTCGAGTGCAAGGACCCGCCCTATCCAGGGACCGCGACGGCGCCAGGGGCTCGCCCTAGAGTCCTGGTCTATCTCCCAACCAACCAAGTCATCCGCTCCTACGCCGAACTCGAGCAGCGACTGGGCGAACTCGGGTGGAGCCGGTACCGGAATTCAGCCGAACCGGACCTCCTCCAATTCCACCGCTCCCATGACTCCGCCCACTTGATCTCCCTCCCCAAAAGCTTCGCGAAATTCAAGCCCATGCACATGTACGACATTGTCGTTAAAAATCGTCATTTCTTTGAAGTTCGTGACCCCAAATCATCGCACCCTTCTTAA ATGTCCGGTGTTTGGGTGTTCGACAAAAATGGCGTGGCCCGTTTAATATCGAACCCAACCAGGGAGTCGTTCGAGTGCAAGGACCCGCCCTATCCAGGGACCGCGACGGCGCCAGGGGCTCGCCCTAGAGTCCTGGTCTATCTCCCAACCAACCAAGTCATCCGCTCCTACGCCGAACTCGAGCAGCGACTGGGCGAACTCGGGTGGAGCCGGTACCGGAATTCAGCCGAACCGGACCTCCTCCAATTCCACCGCTCCCATGACTCCGCCCACTTGATCTCCCTCCCCAAAAGCTTCGCGAAATTCAAGCCCATGCACATGTACGACATTGTCGTTAAAAATCGTCATTTCTTTGAAGTTCGTGACCCCAAATCATCGCACCCTTCTTAA ATGTCCGGTGTTTGGGTGTTCGACAAAAATGGCGTGGCCCGTTTAATATCGAACCCAACCAGGGAGTCGTTCGAGTGCAAGGACCCGCCCTATCCAGGGACCGCGACGGCGCCAGGGGCTCGCCCTAGAGTCCTGGTCTATCTCCCAACCAACCAAGTCATCCGCTCCTACGCCGAACTCGAGCAGCGACTGGGCGAACTCGGGTGGAGCCGGTACCGGAATTCAGCCGAACCGGACCTCCTCCAATTCCACCGCTCCCATGACTCCGCCCACTTGATCTCCCTCCCCAAAAGCTTCGCGAAATTCAAGCCCATGCACATGTACGACATTGTCGTTAAAAATCGTCATTTCTTTGAAGTTCGTGACCCCAAATCATCGCACCCTTCTTAA MSGVWVFDKNGVARLISNPTRESFECKDPPYPGTATAPGARPRVLVYLPTNQVIRSYAELEQRLGELGWSRYRNSAEPDLLQFHRSHDSAHLISLPKSFAKFKPMHMYDIVVKNRHFFEVRDPKSSHPS Homology
BLAST of Csor.00g102400 vs. ExPASy Swiss-Prot
Match: O23624 (Flowering-promoting factor 1 OS=Arabidopsis thaliana OX=3702 GN=FPF1 PE=1 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.9e-25 Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 0
BLAST of Csor.00g102400 vs. ExPASy Swiss-Prot
Match: O24340 (Flowering-promoting factor 1 OS=Sinapis alba OX=3728 GN=FPF1 PE=2 SV=1) HSP 1 Score: 116.7 bits (291), Expect = 1.9e-25 Identity = 63/122 (51.64%), Postives = 77/122 (63.11%), Query Frame = 0
BLAST of Csor.00g102400 vs. ExPASy Swiss-Prot
Match: Q5Q0B3 (Flowering-promoting factor 1-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=FLP1 PE=2 SV=2) HSP 1 Score: 113.6 bits (283), Expect = 1.6e-24 Identity = 61/124 (49.19%), Postives = 80/124 (64.52%), Query Frame = 0
BLAST of Csor.00g102400 vs. ExPASy Swiss-Prot
Match: Q0E1D7 (Flowering-promoting factor 1-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0460200 PE=2 SV=1) HSP 1 Score: 112.1 bits (279), Expect = 4.8e-24 Identity = 62/123 (50.41%), Postives = 82/123 (66.67%), Query Frame = 0
BLAST of Csor.00g102400 vs. ExPASy Swiss-Prot
Match: Q9LXB5 (Flowering-promoting factor 1-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLP2 PE=2 SV=1) HSP 1 Score: 110.5 bits (275), Expect = 1.4e-23 Identity = 61/122 (50.00%), Postives = 77/122 (63.11%), Query Frame = 0
BLAST of Csor.00g102400 vs. NCBI nr
Match: KAG6570697.1 (Flowering-promoting factor 1, partial [Cucurbita argyrosperma subsp. sororia] >KAG7010544.1 Flowering-promoting factor 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 268 bits (685), Expect = 1.22e-90 Identity = 129/129 (100.00%), Postives = 129/129 (100.00%), Query Frame = 0
BLAST of Csor.00g102400 vs. NCBI nr
Match: XP_022148408.1 (flowering-promoting factor 1-like [Momordica charantia]) HSP 1 Score: 230 bits (587), Expect = 1.19e-75 Identity = 116/131 (88.55%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of Csor.00g102400 vs. NCBI nr
Match: KAG6760852.1 (hypothetical protein POTOM_034035 [Populus tomentosa]) HSP 1 Score: 213 bits (542), Expect = 7.12e-69 Identity = 101/126 (80.16%), Postives = 112/126 (88.89%), Query Frame = 0
BLAST of Csor.00g102400 vs. NCBI nr
Match: KAG5238222.1 (flowering-promoting factor [Salix suchowensis]) HSP 1 Score: 213 bits (541), Expect = 1.01e-68 Identity = 101/126 (80.16%), Postives = 113/126 (89.68%), Query Frame = 0
BLAST of Csor.00g102400 vs. NCBI nr
Match: CAB4282452.1 (unnamed protein product [Prunus armeniaca] >CAB4312865.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 212 bits (540), Expect = 1.44e-68 Identity = 103/123 (83.74%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Csor.00g102400 vs. ExPASy TrEMBL
Match: A0A0A0KE84 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G190350 PE=3 SV=1) HSP 1 Score: 247 bits (631), Expect = 1.09e-82 Identity = 120/129 (93.02%), Postives = 123/129 (95.35%), Query Frame = 0
BLAST of Csor.00g102400 vs. ExPASy TrEMBL
Match: A0A6J1D405 (flowering-promoting factor 1-like OS=Momordica charantia OX=3673 GN=LOC111017063 PE=3 SV=1) HSP 1 Score: 230 bits (587), Expect = 5.78e-76 Identity = 116/131 (88.55%), Postives = 123/131 (93.89%), Query Frame = 0
BLAST of Csor.00g102400 vs. ExPASy TrEMBL
Match: M5WHZ4 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G075900 PE=3 SV=1) HSP 1 Score: 212 bits (540), Expect = 6.95e-69 Identity = 103/123 (83.74%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Csor.00g102400 vs. ExPASy TrEMBL
Match: A0A6J5V2H6 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS35930 PE=3 SV=1) HSP 1 Score: 212 bits (540), Expect = 6.95e-69 Identity = 103/123 (83.74%), Postives = 110/123 (89.43%), Query Frame = 0
BLAST of Csor.00g102400 vs. ExPASy TrEMBL
Match: A0A1Q3CDF3 (Uncharacterized protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_21732 PE=3 SV=1) HSP 1 Score: 212 bits (540), Expect = 6.95e-69 Identity = 102/126 (80.95%), Postives = 114/126 (90.48%), Query Frame = 0
BLAST of Csor.00g102400 vs. TAIR 10
Match: AT5G24860.1 (flowering promoting factor 1 ) HSP 1 Score: 116.7 bits (291), Expect = 1.4e-26 Identity = 61/122 (50.00%), Postives = 78/122 (63.93%), Query Frame = 0
BLAST of Csor.00g102400 vs. TAIR 10
Match: AT4G31380.1 (FPF1-like protein 1 ) HSP 1 Score: 113.6 bits (283), Expect = 1.2e-25 Identity = 61/124 (49.19%), Postives = 80/124 (64.52%), Query Frame = 0
BLAST of Csor.00g102400 vs. TAIR 10
Match: AT5G10625.1 (BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 110.5 bits (275), Expect = 9.9e-25 Identity = 61/122 (50.00%), Postives = 77/122 (63.11%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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