Csor.00g100530 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g100530
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr20: 2952628 .. 2953086 (+)
RNA-Seq ExpressionCsor.00g100530
SyntenyCsor.00g100530
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGGAATAGCTGTTTTAAAAGCAATAAAGTTATGGCGCAAGATGAATCTTGTTTGGCTTTGTCTAATTCGCCTCCTGTGGAGGCTAAGAAAGTAGAGGAGAAACCGGTGGCCGGATCGGCTATGGCGAAGCCGAAGACGGCAGAGGAGAGAAGCGGTGCGGCTGCTGGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAAGAAGACGAAAATTCTGGTGGAAGTGGCGGGGATGGAGACAGAGCCGGAGTATTGAGGATTAAAGTGGTGATGTCTCAGAGAGAGTTGAAGCAGATATTGAAGGAAAACGAGAACAGTTCACGTTCGTTGGAGGAATTGATTGCTGAATTTAAGGTGAAAGGCAGAACGACGGTTTCAGATGCGATAACCGATGAAGTTGAGGATGAAAATGGAAGCAGGAGGCCGGCTTTGGAATGTATTCCTGAAGGTCTCCATTAA

mRNA sequence

ATGGGGAATAGCTGTTTTAAAAGCAATAAAGTTATGGCGCAAGATGAATCTTGTTTGGCTTTGTCTAATTCGCCTCCTGTGGAGGCTAAGAAAGTAGAGGAGAAACCGGTGGCCGGATCGGCTATGGCGAAGCCGAAGACGGCAGAGGAGAGAAGCGGTGCGGCTGCTGGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAAGAAGACGAAAATTCTGGTGGAAGTGGCGGGGATGGAGACAGAGCCGGAGTATTGAGGATTAAAGTGGTGATGTCTCAGAGAGAGTTGAAGCAGATATTGAAGGAAAACGAGAACAGTTCACGTTCGTTGGAGGAATTGATTGCTGAATTTAAGGTGAAAGGCAGAACGACGGTTTCAGATGCGATAACCGATGAAGTTGAGGATGAAAATGGAAGCAGGAGGCCGGCTTTGGAATGTATTCCTGAAGGTCTCCATTAA

Coding sequence (CDS)

ATGGGGAATAGCTGTTTTAAAAGCAATAAAGTTATGGCGCAAGATGAATCTTGTTTGGCTTTGTCTAATTCGCCTCCTGTGGAGGCTAAGAAAGTAGAGGAGAAACCGGTGGCCGGATCGGCTATGGCGAAGCCGAAGACGGCAGAGGAGAGAAGCGGTGCGGCTGCTGGTAAGAAGGTAGTGAGGTTTAAGCTACAAGAAGAAGACGAAAATTCTGGTGGAAGTGGCGGGGATGGAGACAGAGCCGGAGTATTGAGGATTAAAGTGGTGATGTCTCAGAGAGAGTTGAAGCAGATATTGAAGGAAAACGAGAACAGTTCACGTTCGTTGGAGGAATTGATTGCTGAATTTAAGGTGAAAGGCAGAACGACGGTTTCAGATGCGATAACCGATGAAGTTGAGGATGAAAATGGAAGCAGGAGGCCGGCTTTGGAATGTATTCCTGAAGGTCTCCATTAA

Protein sequence

MGNSCFKSNKVMAQDESCLALSNSPPVEAKKVEEKPVAGSAMAKPKTAEERSGAAAGKKVVRFKLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEFKVKGRTTVSDAITDEVEDENGSRRPALECIPEGLH
Homology
BLAST of Csor.00g100530 vs. NCBI nr
Match: KAG6570883.1 (hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 289 bits (740), Expect = 2.80e-98
Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0

Query: 1   MGNSCFKSNKVMAQDESCLALSNSPPVEAKKVEEKPVAGSAMAKPKTAEERSGAAAGKKV 60
           MGNSCFKSNKVMAQDESCLALSNSPPVEAKKVEEKPVAGSAMAKPKTAEERSGAAAGKKV
Sbjct: 1   MGNSCFKSNKVMAQDESCLALSNSPPVEAKKVEEKPVAGSAMAKPKTAEERSGAAAGKKV 60

Query: 61  VRFKLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEFKVK 120
           VRFKLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEFKVK
Sbjct: 61  VRFKLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEFKVK 120

Query: 121 GRTTVSDAITDEVEDENGSRRPALECIPEGLH 152
           GRTTVSDAITDEVEDENGSRRPALECIPEGLH
Sbjct: 121 GRTTVSDAITDEVEDENGSRRPALECIPEGLH 152

BLAST of Csor.00g100530 vs. NCBI nr
Match: XP_038902397.1 (uncharacterized protein LOC120089037 [Benincasa hispida])

HSP 1 Score: 177 bits (450), Expect = 3.82e-54
Identity = 104/150 (69.33%), Postives = 117/150 (78.00%), Query Frame = 0

Query: 1   MGNSCFKSNKVMAQDESCLALSNSPPVEAKKVEEKPVAGSAMAKPKTAEERSGAAAGKKV 60
           MGN+CFKSNKVMAQDE    L   PP+EAKKVEEKP  GSAMAKPKTAE R+G A+ KKV
Sbjct: 1   MGNNCFKSNKVMAQDEPEDLL---PPIEAKKVEEKPRPGSAMAKPKTAEARTGGAS-KKV 60

Query: 61  VRFKLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEFKVK 120
           VRFKLQEE+E + G G      GVLRIKVVMSQ+ELKQ+LK+ EN+S +LEELI E KVK
Sbjct: 61  VRFKLQEEEEKNSGDG------GVLRIKVVMSQKELKQMLKDRENNSCTLEELITELKVK 120

Query: 121 GRTTVSDAITDEVEDENGSRRPALECIPEG 150
           GRTT+SD   D VEDENG  +P LE IPEG
Sbjct: 121 GRTTISDGRIDAVEDENGRWKPDLEGIPEG 140

BLAST of Csor.00g100530 vs. NCBI nr
Match: KGN63254.1 (hypothetical protein Csa_022493 [Cucumis sativus])

HSP 1 Score: 152 bits (383), Expect = 5.44e-44
Identity = 92/153 (60.13%), Postives = 107/153 (69.93%), Query Frame = 0

Query: 1   MGNSCFKSNKVMAQDESCLALSNSPP---VEAKKVEEKPVAGSAMAKPKTAEERSGAAAG 60
           MGN CFKSNKVMAQD+S     + PP   +E KKV+++P+ GSAMAKPK     +G AAG
Sbjct: 1   MGNICFKSNKVMAQDDS---YDDFPPHHLIEPKKVQQQPLPGSAMAKPKNG---TGGAAG 60

Query: 61  KKVVRFKLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEF 120
           KKVVRF LQEE+++  G        GVLRIKVV+SQ+ELKQILK  EN+S SLEELI E 
Sbjct: 61  KKVVRFNLQEEEKDEEGRNSGDSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEEL 120

Query: 121 KVKGRTTVSDAITDEVEDENGSRRPALECIPEG 150
           KVKGR T   A      DE GS +PALECIPEG
Sbjct: 121 KVKGRATTVSA------DETGSWKPALECIPEG 141

BLAST of Csor.00g100530 vs. NCBI nr
Match: XP_022140639.1 (uncharacterized protein LOC111011249 [Momordica charantia])

HSP 1 Score: 152 bits (383), Expect = 1.73e-43
Identity = 96/153 (62.75%), Postives = 113/153 (73.86%), Query Frame = 0

Query: 1   MGNSCFKSNKVMAQDESCLALSNSPPVEAK-KVEEKPVAGSAMAKPKTAEERSGAAAGKK 60
           MGN C ++N+VMAQDE+C    NS   E   KVE+KP AGSA+A+PKT E R  AA  KK
Sbjct: 43  MGN-CLRNNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARI-AARRKK 102

Query: 61  VVRFKLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEFKV 120
           VVRF+ Q EDE SGG G      GVLRIKVV+SQ+ELKQILK+ E++S +LEEL+AE K+
Sbjct: 103 VVRFQ-QREDEISGGGG------GVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKM 162

Query: 121 KGRTTVSDAITDEVEDENGSRRPALECIPEGLH 152
           KGRT +SDA  D  EDENGS RPALE IPE LH
Sbjct: 163 KGRT-ISDARADNEEDENGSWRPALESIPEDLH 185

BLAST of Csor.00g100530 vs. NCBI nr
Match: TYK24218.1 (hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa])

HSP 1 Score: 149 bits (377), Expect = 4.57e-43
Identity = 95/155 (61.29%), Postives = 111/155 (71.61%), Query Frame = 0

Query: 1   MGNSCFKSNKVMAQDESCLALSNSPP---VEAKKVEEKPVA-GSAMAKPKTAEERSGAAA 60
           MGN CF++NKVMAQD+S     N PP   +EA+KVEE+P+  GSAMAKPK     +G AA
Sbjct: 1   MGNICFRTNKVMAQDDS---YDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNG---TGGAA 60

Query: 61  GKKVVRFKLQEEDENSGG-SGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIA 120
           GKKVVRF LQEE+E+    + GD   AGVLRIKVV+SQ+ELK+ILK  EN+S SLEELI 
Sbjct: 61  GKKVVRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIE 120

Query: 121 EFKVKGRTTVSDAITDEVEDENGSRRPALECIPEG 150
           E KVKGR T        V DE GS +PALECIPEG
Sbjct: 121 ELKVKGRATT-------VSDEIGSWKPALECIPEG 142

BLAST of Csor.00g100530 vs. ExPASy TrEMBL
Match: A0A0A0LQE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 2.63e-44
Identity = 92/153 (60.13%), Postives = 107/153 (69.93%), Query Frame = 0

Query: 1   MGNSCFKSNKVMAQDESCLALSNSPP---VEAKKVEEKPVAGSAMAKPKTAEERSGAAAG 60
           MGN CFKSNKVMAQD+S     + PP   +E KKV+++P+ GSAMAKPK     +G AAG
Sbjct: 1   MGNICFKSNKVMAQDDS---YDDFPPHHLIEPKKVQQQPLPGSAMAKPKNG---TGGAAG 60

Query: 61  KKVVRFKLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEF 120
           KKVVRF LQEE+++  G        GVLRIKVV+SQ+ELKQILK  EN+S SLEELI E 
Sbjct: 61  KKVVRFNLQEEEKDEEGRNSGDSGPGVLRIKVVISQKELKQILKSRENNSCSLEELIEEL 120

Query: 121 KVKGRTTVSDAITDEVEDENGSRRPALECIPEG 150
           KVKGR T   A      DE GS +PALECIPEG
Sbjct: 121 KVKGRATTVSA------DETGSWKPALECIPEG 141

BLAST of Csor.00g100530 vs. ExPASy TrEMBL
Match: A0A6J1CG85 (uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011249 PE=4 SV=1)

HSP 1 Score: 152 bits (383), Expect = 8.37e-44
Identity = 96/153 (62.75%), Postives = 113/153 (73.86%), Query Frame = 0

Query: 1   MGNSCFKSNKVMAQDESCLALSNSPPVEAK-KVEEKPVAGSAMAKPKTAEERSGAAAGKK 60
           MGN C ++N+VMAQDE+C    NS   E   KVE+KP AGSA+A+PKT E R  AA  KK
Sbjct: 43  MGN-CLRNNRVMAQDEACSPSPNSSLTETNYKVEDKPAAGSALARPKTEEARI-AARRKK 102

Query: 61  VVRFKLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEFKV 120
           VVRF+ Q EDE SGG G      GVLRIKVV+SQ+ELKQILK+ E++S +LEEL+AE K+
Sbjct: 103 VVRFQ-QREDEISGGGG------GVLRIKVVVSQKELKQILKDRESNSSTLEELLAELKM 162

Query: 121 KGRTTVSDAITDEVEDENGSRRPALECIPEGLH 152
           KGRT +SDA  D  EDENGS RPALE IPE LH
Sbjct: 163 KGRT-ISDARADNEEDENGSWRPALESIPEDLH 185

BLAST of Csor.00g100530 vs. ExPASy TrEMBL
Match: A0A5D3DKZ8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold27G00200 PE=4 SV=1)

HSP 1 Score: 149 bits (377), Expect = 2.21e-43
Identity = 95/155 (61.29%), Postives = 111/155 (71.61%), Query Frame = 0

Query: 1   MGNSCFKSNKVMAQDESCLALSNSPP---VEAKKVEEKPVA-GSAMAKPKTAEERSGAAA 60
           MGN CF++NKVMAQD+S     N PP   +EA+KVEE+P+  GSAMAKPK     +G AA
Sbjct: 1   MGNICFRTNKVMAQDDS---YDNLPPDQFIEAEKVEEQPLRPGSAMAKPKNG---TGGAA 60

Query: 61  GKKVVRFKLQEEDENSGG-SGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIA 120
           GKKVVRF LQEE+E+    + GD   AGVLRIKVV+SQ+ELK+ILK  EN+S SLEELI 
Sbjct: 61  GKKVVRFNLQEEEEDQEDRNSGDDSGAGVLRIKVVISQKELKEILKNRENNSCSLEELIE 120

Query: 121 EFKVKGRTTVSDAITDEVEDENGSRRPALECIPEG 150
           E KVKGR T        V DE GS +PALECIPEG
Sbjct: 121 ELKVKGRATT-------VSDEIGSWKPALECIPEG 142

BLAST of Csor.00g100530 vs. ExPASy TrEMBL
Match: A0A7N2MA05 (Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 3.50e-17
Identity = 65/151 (43.05%), Postives = 86/151 (56.95%), Query Frame = 0

Query: 1   MGNSCFKSNKVMAQDESCLALSNSPPVEAKKVEE-KPVAGSAMAKPKTAEERSGAAAGKK 60
           MGN C  SNK +AQ+E         P EA+ VE+ KP   S +   K  +   G    KK
Sbjct: 1   MGN-CL-SNKSLAQEEEV-------PKEAEVVEQTKPSTASKLEPVKLVD--GGHKKKKK 60

Query: 61  VVRFKLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSS-RSLEELIAEFK 120
           VVRFKL+E+D N G S     R+GV+RI+VV++Q+ELKQIL   E     S+E+L+    
Sbjct: 61  VVRFKLEEDDTNVGTSSEGDSRSGVVRIRVVVTQKELKQILDCKEGLKYSSVEQLVNALN 120

Query: 121 VKGRTTVSDAITDEVEDENGSRRPALECIPE 149
           ++GR       +DE E  N + RPALE IPE
Sbjct: 121 LRGRKISEVRTSDEDEGINSNWRPALESIPE 140

BLAST of Csor.00g100530 vs. ExPASy TrEMBL
Match: A0A540LQ93 (Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_025785 PE=4 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 9.18e-15
Identity = 62/160 (38.75%), Postives = 87/160 (54.37%), Query Frame = 0

Query: 1   MGNSCFKSNKVMAQD-ESCLALSNSPPVEAKKVEEKPVAGSAMAKPKTAEERSGAAAGKK 60
           MGN    +NK+ +QD E   A   + P+EA+K        +AM  P   ++       KK
Sbjct: 1   MGNCLRNNNKIASQDYEKHEAAKEAEPLEARK--------TAMPLPSNLKQE------KK 60

Query: 61  VVRFKLQEEDENSGG--SGGDGDRAGVLRIKVVMSQRELKQILKENENSSRS-LEELIAE 120
            VRF LQE+ +NSG    GGD    G +RI++V++Q ELKQ+L   ++S+ S LEEL+  
Sbjct: 61  SVRFNLQEDHQNSGKRVDGGDSKTGGAVRIRLVVTQEELKQLLNYKKDSNHSSLEELLNA 120

Query: 121 FKVKGRTTVSDAITDEVEDENGSR----RPALECIPEGLH 152
            K +G T VS+      +DE+ S     RP LE IPE  H
Sbjct: 121 VKSRG-TRVSEINGTSSDDESISSGSCWRPTLESIPEDQH 145

BLAST of Csor.00g100530 vs. TAIR 10
Match: AT3G21680.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: root, flower, stamen; EXPRESSED DURING: 4 anthesis, petal differentiation and expansion stage; Has 34 Blast hits to 34 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 34; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 46.6 bits (109), Expect = 2.1e-05
Identity = 35/89 (39.33%), Postives = 53/89 (59.55%), Query Frame = 0

Query: 63  FKLQEEDENSGGSGGDGDRAGVLRIKVVMSQRELKQILKENENSSRSLEELIAEFKVKGR 122
           F+ +EE E S       + + V+RIKVV++++EL+QIL  ++N   S+++L+   K  GR
Sbjct: 35  FRGEEESERS-----TEEESKVVRIKVVVTKKELRQIL-GHKNGINSIQQLVHVLKDSGR 94

Query: 123 TTVSDAITDEVEDENGSR--RPALECIPE 150
             +S A  +E E E G    RP LE IPE
Sbjct: 95  -NISMASYEEDEKEEGDENWRPTLESIPE 116

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6570883.12.80e-98100.00hypothetical protein SDJN03_29798, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_038902397.13.82e-5469.33uncharacterized protein LOC120089037 [Benincasa hispida][more]
KGN63254.15.44e-4460.13hypothetical protein Csa_022493 [Cucumis sativus][more]
XP_022140639.11.73e-4362.75uncharacterized protein LOC111011249 [Momordica charantia][more]
TYK24218.14.57e-4361.29hypothetical protein E5676_scaffold27G00200 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
A0A0A0LQE92.63e-4460.13Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G418890 PE=4 SV=1[more]
A0A6J1CG858.37e-4462.75uncharacterized protein LOC111011249 OS=Momordica charantia OX=3673 GN=LOC111011... [more]
A0A5D3DKZ82.21e-4361.29Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... [more]
A0A7N2MA053.50e-1743.05Uncharacterized protein OS=Quercus lobata OX=97700 PE=4 SV=1[more]
A0A540LQ939.18e-1538.75Uncharacterized protein OS=Malus baccata OX=106549 GN=C1H46_025785 PE=4 SV=1[more]
Match NameE-valueIdentityDescription
AT3G21680.12.1e-0539.33unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-termin... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 96..120
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 22..58
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 125..152
NoneNo IPR availablePANTHERPTHR33148PLASTID MOVEMENT IMPAIRED PROTEIN-RELATEDcoord: 1..149
NoneNo IPR availablePANTHERPTHR33148:SF55OS01G0219300 PROTEINcoord: 1..149

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g100530.m01Csor.00g100530.m01mRNA