Csor.00g098780 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g098780
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr01: 3352222 .. 3352566 (-)
RNA-Seq ExpressionCsor.00g098780
SyntenyCsor.00g098780
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATAAGGGGAGGAAATCGTGGTAGTGCGGTACAGTTGTGTTTGGAAAACCCCGTAAAATCTGGTCTGCCGCCTGCAGCACAATTCCCACCGCCACGCACTGAAACCTACGCCGCCGCGCAATTTGCCCTCCATGCGCCGCGCCGTCCCCCCACGTATCCCATTTTCTTCCTTTCGTCAGACTTTCTACGCCACCGTCACTCTCTTTTCTTCCTCTTACTCTACGTGGCCGCCCCTCTCCGCCTCGTGTCGCCGCCGTACCGGAACTCCACTTCTAGCTGCGTCTCCACTTTCAGCCGCCGGAAAACACTTCGGGTTTATGATCAATCTCTAAAGAAATATTAG

mRNA sequence

ATGATAAGGGGAGGAAATCGTGGTAGTGCGGTACAGTTGTGTTTGGAAAACCCCGTAAAATCTGGTCTGCCGCCTGCAGCACAATTCCCACCGCCACGCACTGAAACCTACGCCGCCGCGCAATTTGCCCTCCATGCGCCGCGCCGTCCCCCCACGTATCCCATTTTCTTCCTTTCGTCAGACTTTCTACGCCACCGTCACTCTCTTTTCTTCCTCTTACTCTACGTGGCCGCCCCTCTCCGCCTCGTGTCGCCGCCGTACCGGAACTCCACTTCTAGCTGCGTCTCCACTTTCAGCCGCCGGAAAACACTTCGGGTTTATGATCAATCTCTAAAGAAATATTAG

Coding sequence (CDS)

ATGATAAGGGGAGGAAATCGTGGTAGTGCGGTACAGTTGTGTTTGGAAAACCCCGTAAAATCTGGTCTGCCGCCTGCAGCACAATTCCCACCGCCACGCACTGAAACCTACGCCGCCGCGCAATTTGCCCTCCATGCGCCGCGCCGTCCCCCCACGTATCCCATTTTCTTCCTTTCGTCAGACTTTCTACGCCACCGTCACTCTCTTTTCTTCCTCTTACTCTACGTGGCCGCCCCTCTCCGCCTCGTGTCGCCGCCGTACCGGAACTCCACTTCTAGCTGCGTCTCCACTTTCAGCCGCCGGAAAACACTTCGGGTTTATGATCAATCTCTAAAGAAATATTAG

Protein sequence

MIRGGNRGSAVQLCLENPVKSGLPPAAQFPPPRTETYAAAQFALHAPRRPPTYPIFFLSSDFLRHRHSLFFLLLYVAAPLRLVSPPYRNSTSSCVSTFSRRKTLRVYDQSLKKY
Homology
[Close]
BLAST of Csor.00g098780 vs. NCBI nr
Match: KAG6607272.1 (hypothetical protein SDJN03_00614, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 229 bits (584), Expect = 1.02e-75
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0 

Query: 1   MIRGGNRGSAVQLCLENPVKSGLPPAAQFPPPRTETYAAAQFALHAPRRPPTYPIFFLSS 60
           MIRGGNRGSAVQLCLENPVKSGLPPAAQFPPPRTETYAAAQFALHAPRRPPTYPIFFLSS
Sbjct: 1   MIRGGNRGSAVQLCLENPVKSGLPPAAQFPPPRTETYAAAQFALHAPRRPPTYPIFFLSS 60

Query: 61  DFLRHRHSLFFLLLYVAAPLRLVSPPYRNSTSSCVSTFSRRKTLRVYDQSLKKY 114
           DFLRHRHSLFFLLLYVAAPLRLVSPPYRNSTSSCVSTFSRRKTLRVYDQSLKKY
Sbjct: 61  DFLRHRHSLFFLLLYVAAPLRLVSPPYRNSTSSCVSTFSRRKTLRVYDQSLKKY 114

The following BLAST results are available for this feature:
BLAST of Csor.00g098780 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g098780 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6607272.11.02e-75100.00hypothetical protein SDJN03_00614, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g098780 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g098780 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g098780.m01Csor.00g098780.m01mRNA