Csor.00g097130 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCGAATACGGTTATGTTCCGTCCGACATTGTCGAACCCTCGACAAACTCTGATACCGAGCAAATCCGTCTCTGGCACTGTTCGGTTCGCAGAGGTAGCCGGTGGTACGACCGCAGAGTGTGCCGCTGTGTTCTGCTGTTGTCCTTGCATCGCCGTTAACTTCCTCATCCTCGCCATTTACAAGGTTCCGGCCGGCCTCTGTCGCCGCGCTCTGAGGACAAAACACCGACAGAGCGTGAAGAAGAAGAAAGCAATTCATCCGGCGAGGCTCGGCCGATTCCCTGGCGGAGTTCTCGACGATGGGGATATTCAGGTTATTACGATGGAAAAAACGGTGTACTCAGAGGAGGCGGAGAGGAAAGTGGTGGAACTCGAAAAGGAGATGTGGGATATTTTTTACAGTACTGGATTCTGGAGAAGCCCTTCACAGAGAGATCAAATTTCAAGCTCTAATTGA ATGTCGAATACGGTTATGTTCCGTCCGACATTGTCGAACCCTCGACAAACTCTGATACCGAGCAAATCCGTCTCTGGCACTGTTCGGTTCGCAGAGGTAGCCGGTGGTACGACCGCAGAGTGTGCCGCTGTGTTCTGCTGTTGTCCTTGCATCGCCGTTAACTTCCTCATCCTCGCCATTTACAAGGTTCCGGCCGGCCTCTGTCGCCGCGCTCTGAGGACAAAACACCGACAGAGCGTGAAGAAGAAGAAAGCAATTCATCCGGCGAGGCTCGGCCGATTCCCTGGCGGAGTTCTCGACGATGGGGATATTCAGGTTATTACGATGGAAAAAACGGTGTACTCAGAGGAGGCGGAGAGGAAAGTGGTGGAACTCGAAAAGGAGATGTGGGATATTTTTTACAGTACTGGATTCTGGAGAAGCCCTTCACAGAGAGATCAAATTTCAAGCTCTAATTGA ATGTCGAATACGGTTATGTTCCGTCCGACATTGTCGAACCCTCGACAAACTCTGATACCGAGCAAATCCGTCTCTGGCACTGTTCGGTTCGCAGAGGTAGCCGGTGGTACGACCGCAGAGTGTGCCGCTGTGTTCTGCTGTTGTCCTTGCATCGCCGTTAACTTCCTCATCCTCGCCATTTACAAGGTTCCGGCCGGCCTCTGTCGCCGCGCTCTGAGGACAAAACACCGACAGAGCGTGAAGAAGAAGAAAGCAATTCATCCGGCGAGGCTCGGCCGATTCCCTGGCGGAGTTCTCGACGATGGGGATATTCAGGTTATTACGATGGAAAAAACGGTGTACTCAGAGGAGGCGGAGAGGAAAGTGGTGGAACTCGAAAAGGAGATGTGGGATATTTTTTACAGTACTGGATTCTGGAGAAGCCCTTCACAGAGAGATCAAATTTCAAGCTCTAATTGA MSNTVMFRPTLSNPRQTLIPSKSVSGTVRFAEVAGGTTAECAAVFCCCPCIAVNFLILAIYKVPAGLCRRALRTKHRQSVKKKKAIHPARLGRFPGGVLDDGDIQVITMEKTVYSEEAERKVVELEKEMWDIFYSTGFWRSPSQRDQISSSN Homology
BLAST of Csor.00g097130 vs. NCBI nr
Match: XP_022934460.1 (uncharacterized protein LOC111441632 [Cucurbita moschata] >KAG6580769.1 hypothetical protein SDJN03_20771, partial [Cucurbita argyrosperma subsp. sororia] >KAG7017522.1 hypothetical protein SDJN02_19387, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 302 bits (774), Expect = 1.82e-103 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Csor.00g097130 vs. NCBI nr
Match: XP_023528177.1 (uncharacterized protein LOC111791168 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 295 bits (755), Expect = 2.18e-100 Identity = 146/152 (96.05%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of Csor.00g097130 vs. NCBI nr
Match: XP_022983149.1 (uncharacterized protein LOC111481788 [Cucurbita maxima]) HSP 1 Score: 288 bits (736), Expect = 1.14e-97 Identity = 140/152 (92.11%), Postives = 148/152 (97.37%), Query Frame = 0
BLAST of Csor.00g097130 vs. NCBI nr
Match: XP_038905288.1 (uncharacterized protein LOC120091362 [Benincasa hispida]) HSP 1 Score: 219 bits (557), Expect = 2.84e-70 Identity = 114/158 (72.15%), Postives = 130/158 (82.28%), Query Frame = 0
BLAST of Csor.00g097130 vs. NCBI nr
Match: XP_011652052.1 (uncharacterized protein LOC105434984 [Cucumis sativus] >KGN59241.1 hypothetical protein Csa_001735 [Cucumis sativus]) HSP 1 Score: 211 bits (537), Expect = 3.05e-67 Identity = 110/159 (69.18%), Postives = 125/159 (78.62%), Query Frame = 0
BLAST of Csor.00g097130 vs. ExPASy TrEMBL
Match: A0A6J1F7R8 (uncharacterized protein LOC111441632 OS=Cucurbita moschata OX=3662 GN=LOC111441632 PE=4 SV=1) HSP 1 Score: 302 bits (774), Expect = 8.84e-104 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of Csor.00g097130 vs. ExPASy TrEMBL
Match: A0A6J1J6H8 (uncharacterized protein LOC111481788 OS=Cucurbita maxima OX=3661 GN=LOC111481788 PE=4 SV=1) HSP 1 Score: 288 bits (736), Expect = 5.52e-98 Identity = 140/152 (92.11%), Postives = 148/152 (97.37%), Query Frame = 0
BLAST of Csor.00g097130 vs. ExPASy TrEMBL
Match: A0A0A0LGV0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G784360 PE=4 SV=1) HSP 1 Score: 211 bits (537), Expect = 1.48e-67 Identity = 110/159 (69.18%), Postives = 125/159 (78.62%), Query Frame = 0
BLAST of Csor.00g097130 vs. ExPASy TrEMBL
Match: A0A5D3DQ13 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold352G004890 PE=4 SV=1) HSP 1 Score: 207 bits (527), Expect = 4.92e-66 Identity = 108/159 (67.92%), Postives = 126/159 (79.25%), Query Frame = 0
BLAST of Csor.00g097130 vs. ExPASy TrEMBL
Match: A0A1S4DUJ2 (uncharacterized protein LOC103486710 OS=Cucumis melo OX=3656 GN=LOC103486710 PE=4 SV=1) HSP 1 Score: 192 bits (489), Expect = 2.09e-60 Identity = 102/159 (64.15%), Postives = 119/159 (74.84%), Query Frame = 0
BLAST of Csor.00g097130 vs. TAIR 10
Match: AT3G11690.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06380.1); Has 84 Blast hits to 84 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 112.8 bits (281), Expect = 2.4e-25 Identity = 74/188 (39.36%), Postives = 98/188 (52.13%), Query Frame = 0
BLAST of Csor.00g097130 vs. TAIR 10
Match: AT5G06380.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 100.5 bits (249), Expect = 1.2e-21 Identity = 59/137 (43.07%), Postives = 78/137 (56.93%), Query Frame = 0
BLAST of Csor.00g097130 vs. TAIR 10
Match: AT2G27180.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G11690.1); Has 99 Blast hits to 99 proteins in 14 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 99; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 98.2 bits (243), Expect = 6.0e-21 Identity = 56/129 (43.41%), Postives = 75/129 (58.14%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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