Csor.00g091580 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g091580
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr11: 2193831 .. 2194745 (-)
RNA-Seq ExpressionCsor.00g091580
SyntenyCsor.00g091580
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCCAGACTTGGGTAATCTCTCACTCTCTGCATCTCTTACGCGCACTCGCTGCGCTAATCTCAAACCAGCCTTCATCCTTCTGATCTTTTGTCTTCAGTCATCTGCAATGAATCGGTTAAATATATGCCCAGTGACTCTATTTGGGACCAGTGGTTTTCATGTCCGCTCCCCATTGACGATGAGGTCGGTGGCAACTATGGGATTAGGGTTTCATGGGCCAGAGGAGATGCGTTGGACCGATCTAAAAGGAATTGCGGTGGGAAGACTTTGGAAGATCATGTGAAATCTTGGGTTCGGAGAAAGCTAGAGTCCGGCGTTCCCCAGTCTCGCTGTTCATTTCCATTTCTTGTAGGCGCTCGGAAAATGGTGATGTTTTCTGCCTGTTTTCTTTTTTCGTTTTACGTACTACGATACTGGACCCGGTAGATTCATCAACGTGGTGCTGGATTTAGTGTTTAGCATGTATTCATTCGTTGTTGTTTCGTTCTGCTTGATTCCAGCCGGGGGACTTCATTTTTATTTAACTTAACAGGGAATGAAGCTCTAGAAGACGTTTTTGAAACTGAGCCTAATGTTTTCGTGCAAGTATGATATTGGAGAAGTTCATATCCTTTGAGAAGTGCTTGGGGAGGAAATGATGTAGATGTTGCGCGTAGAAATTTATATTCGAGTAGCGTAGGACGAAAATTATTGATCCACTGAAGTTTATTTTATCAGAGTAAGTTAGTTTGCTTGTTCTTTCCATAAATATAGGTTCCATTTTAAAAGCAACTGTCAATGAGAGGAGTAATCCATGTTTATTATAAAGATTGTGAGGTCTCTTCACTTTTTGATGTGGAGTCCATGGTGCTTGATGTGCAATCTAAAATTTTATGCCAATTAAATTTGTCTTTCTACTGGCCGCTTCAGGTAG

mRNA sequence

ATGCCAGACTTGGGTAATCTCTCACTCTCTGCATCTCTTACGCGCACTCGCTGCGCTAATCTCAAACCAGCCTTCATCCTTCTGATCTTTTGTCTTCAGTCATCTGCAATGAATCGGTTAAATATATGCCCAGTGACTCTATTTGGGACCAGTGGTTTTCATGTCCGCTCCCCATTGACGATGAGGTCGGTGGCAACTATGGGATTAGGGTTTCATGGGCCAGAGGAGATGCGTTGGACCGATCTAAAAGGAATTGCGGTGGGAAGACTTTGGAAGATCATGCGCTCGGAAAATGGGAATGAAGCTCTAGAAGACGTTTTTGAAACTGAGCCTAATGTTTTCGTGCAACGTAGGACGAAAATTATTGATCCACTGAAGTTTATTTTATCAGAGTAG

Coding sequence (CDS)

ATGCCAGACTTGGGTAATCTCTCACTCTCTGCATCTCTTACGCGCACTCGCTGCGCTAATCTCAAACCAGCCTTCATCCTTCTGATCTTTTGTCTTCAGTCATCTGCAATGAATCGGTTAAATATATGCCCAGTGACTCTATTTGGGACCAGTGGTTTTCATGTCCGCTCCCCATTGACGATGAGGTCGGTGGCAACTATGGGATTAGGGTTTCATGGGCCAGAGGAGATGCGTTGGACCGATCTAAAAGGAATTGCGGTGGGAAGACTTTGGAAGATCATGCGCTCGGAAAATGGGAATGAAGCTCTAGAAGACGTTTTTGAAACTGAGCCTAATGTTTTCGTGCAACGTAGGACGAAAATTATTGATCCACTGAAGTTTATTTTATCAGAGTAG

Protein sequence

MPDLGNLSLSASLTRTRCANLKPAFILLIFCLQSSAMNRLNICPVTLFGTSGFHVRSPLTMRSVATMGLGFHGPEEMRWTDLKGIAVGRLWKIMRSENGNEALEDVFETEPNVFVQRRTKIIDPLKFILSE
Homology
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BLAST of Csor.00g091580 vs. NCBI nr
Match: KAG6587798.1 (hypothetical protein SDJN03_16363, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 264 bits (674), Expect = 6.74e-89
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MPDLGNLSLSASLTRTRCANLKPAFILLIFCLQSSAMNRLNICPVTLFGTSGFHVRSPLT 60
           MPDLGNLSLSASLTRTRCANLKPAFILLIFCLQSSAMNRLNICPVTLFGTSGFHVRSPLT
Sbjct: 1   MPDLGNLSLSASLTRTRCANLKPAFILLIFCLQSSAMNRLNICPVTLFGTSGFHVRSPLT 60

Query: 61  MRSVATMGLGFHGPEEMRWTDLKGIAVGRLWKIMRSENGNEALEDVFETEPNVFVQRRTK 120
           MRSVATMGLGFHGPEEMRWTDLKGIAVGRLWKIMRSENGNEALEDVFETEPNVFVQRRTK
Sbjct: 61  MRSVATMGLGFHGPEEMRWTDLKGIAVGRLWKIMRSENGNEALEDVFETEPNVFVQRRTK 120

Query: 121 IIDPLKFILSE 131
           IIDPLKFILSE
Sbjct: 121 IIDPLKFILSE 131

The following BLAST results are available for this feature:
BLAST of Csor.00g091580 vs.
Match NameE-valueIdentityDescription
BLAST of Csor.00g091580 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6587798.16.74e-89100.00hypothetical protein SDJN03_16363, partial [Cucurbita argyrosperma subsp. sorori... [more]
BLAST of Csor.00g091580 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of Csor.00g091580 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g091580.m01Csor.00g091580.m01mRNA