Csor.00g084400 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g084400
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Descriptiontranscription initiation factor TFIID subunit 9
LocationCsor_Chr17: 6924650 .. 6926305 (-)
RNA-Seq ExpressionCsor.00g084400
SyntenyCsor.00g084400
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGAGTCGTGGAAGTGGAGGTGGAGGTGGAGGTGGAGGTGGATATGACAACCAAAACACTAATTTCTCGCCCGAAGCTCGACCTTCTCAACTGGGTACGTTGCTGTTTATCTTCTTTCCGTTCATGATTCCTCCATCGAGTTCCTACTTTTTTTTCTTTTCCACTTTCATTCAATTGTTTCTGGATGATTTCTCAAACGATTTTAGGGCATTTAATTTTACGGGTCGAATTTGTTCGTCATTTGATTGTTATTTTGATTTGACTCTTGAAACAAAATCGTAGCATGTAATTTAGAAATTTCGTTTTCTCGCGTCACTTGGATGTTTGAAGTTGGGAGAAATTAGGTTGGAAAAGTGGGAATAGTGTGAAATTTTAAGTTTGAGAAGCCAATTTGTTGTCGTTCTCTGTTTATCTTCAAGCTTCAAGATTGAACTATGGATTTCAAAATCAATTTCGAAAGACATTGAATTCATCTCTAGAGTATGCTGTATCTGAAAGTTGCTGGAATTATCATACCGGAGATGAAATCATCCTATTGGATCACTGAACTGTTTATTTTGTTCACGTTGTTACTTAAACAATCAAACGATGAGAAAAGAGCAAAACATAAGTACAAAGCATATGAAAGTCTAGGAACTTATAATTGTTATTGCCTTCTTCAAATAATGCTCTACTTCATAATTATCAAACGTGCAATGTAAAACAAGCTGGTTATGTTTGATAGAATATCAGTTTAGCAGATTGCAAGAATGATTTAAATCTCTTGTGCAGGTGACAGGGGCGTTAAGGAGATGTCTGAGGGAGACGAGGACCTGCCAAGGGATGCAAAGATTGTGAAAACACTTCTGAAATCAATGGGAGTTGAAGATTATGAACCCCGAGTTATACACCAGTTTCTTGAGCTGTGGTATCGTTACGTCGTTGACGTATTGACGGATGCGCAAGTATACTCGGAGCATGCTGGCAAGGCTGCTATCGACTGTGATGATGTGAAGCTTGCAATCCAGTCCAAAGTTAATTTCAGCTTCTCTCAACCTCCTCCAAGAGAGGTAAGATTGCTTAATAGTCCCATTGGAAGCTTGAAGTATCTGCATGGGAAAGAAATGTAGTCTCGAATAAAGAGATTTAGTGTAACGGCCTAATCCTCTTTGGGCTTTCCCTTTCGGGTTCCCCTCAAGGTTTTTAAAACGCGTCTGCTAGGGAGAGGTTTCCACACTCTTATAAAGAATGTTTCATTCTCCTCCCCAACCGAGGTTACGATCTACGATCTCACATTCTCACATTTAGATGGGAGTAATACTAGATCATATTCATGGATTTTTGCTATCTTCTCTCCTATTTTAGGAAAAGTGTTTTAACCATGTGTCTCTTTTTTGTTAGGTTCTTCTAGAGTTGGCTAGAAACCGGAATAAAATTCCATTGCCAAGGTCAATTGGCGGGCCTGGTATCGCGCTCCCACCCGATCAAGATACATTGCTCAGTCCCAACTATCAACTGGCAATCCCGAGGAAGCGACAAGTCGAAGCCATGGAGGAAACAGAGGAGGACGAAGGTGTCGATGCAGTTCCATCCCAAGAACTCAGCACAGAAGTACCTCAACAACATACCCCACAGAGAGTATCTTTCCCTTTGTCTAAACGTCCAAAAATAACATAG

mRNA sequence

ATGAGTCGTGGAAGTGGAGGTGGAGGTGGAGGTGGAGGTGGATATGACAACCAAAACACTAATTTCTCGCCCGAAGCTCGACCTTCTCAACTGGGTGACAGGGGCGTTAAGGAGATGTCTGAGGGAGACGAGGACCTGCCAAGGGATGCAAAGATTGTGAAAACACTTCTGAAATCAATGGGAGTTGAAGATTATGAACCCCGAGTTATACACCAGTTTCTTGAGCTGTGGTATCGTTACGTCGTTGACGTATTGACGGATGCGCAAGTATACTCGGAGCATGCTGGCAAGGCTGCTATCGACTGTGATGATGTGAAGCTTGCAATCCAGTCCAAAGTTAATTTCAGCTTCTCTCAACCTCCTCCAAGAGAGGTTCTTCTAGAGTTGGCTAGAAACCGGAATAAAATTCCATTGCCAAGGTCAATTGGCGGGCCTGGTATCGCGCTCCCACCCGATCAAGATACATTGCTCAGTCCCAACTATCAACTGGCAATCCCGAGGAAGCGACAAGTCGAAGCCATGGAGGAAACAGAGGAGGACGAAGGTGTCGATGCAGTTCCATCCCAAGAACTCAGCACAGAAGTACCTCAACAACATACCCCACAGAGAGTATCTTTCCCTTTGTCTAAACGTCCAAAAATAACATAG

Coding sequence (CDS)

ATGAGTCGTGGAAGTGGAGGTGGAGGTGGAGGTGGAGGTGGATATGACAACCAAAACACTAATTTCTCGCCCGAAGCTCGACCTTCTCAACTGGGTGACAGGGGCGTTAAGGAGATGTCTGAGGGAGACGAGGACCTGCCAAGGGATGCAAAGATTGTGAAAACACTTCTGAAATCAATGGGAGTTGAAGATTATGAACCCCGAGTTATACACCAGTTTCTTGAGCTGTGGTATCGTTACGTCGTTGACGTATTGACGGATGCGCAAGTATACTCGGAGCATGCTGGCAAGGCTGCTATCGACTGTGATGATGTGAAGCTTGCAATCCAGTCCAAAGTTAATTTCAGCTTCTCTCAACCTCCTCCAAGAGAGGTTCTTCTAGAGTTGGCTAGAAACCGGAATAAAATTCCATTGCCAAGGTCAATTGGCGGGCCTGGTATCGCGCTCCCACCCGATCAAGATACATTGCTCAGTCCCAACTATCAACTGGCAATCCCGAGGAAGCGACAAGTCGAAGCCATGGAGGAAACAGAGGAGGACGAAGGTGTCGATGCAGTTCCATCCCAAGAACTCAGCACAGAAGTACCTCAACAACATACCCCACAGAGAGTATCTTTCCCTTTGTCTAAACGTCCAAAAATAACATAG

Protein sequence

MSRGSGGGGGGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETEEDEGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT
Homology
[Close]
BLAST of Csor.00g084400 vs. ExPASy Swiss-Prot
Match: Q9SYH2 (Transcription initiation factor TFIID subunit 9 OS=Arabidopsis thaliana OX=3702 GN=TAF9 PE=1 SV=1)

HSP 1 Score: 260.8 bits (665), Expect = 1.4e-68
Identity = 134/181 (74.03%), Postives = 152/181 (83.98%), Query Frame = 0 

Query: 41  EGDEDLPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAI 100
           EG+ED+PRDAKIVK+LLKSMGVEDYEPRVIHQFLELWYRYVV+VLTDAQVYSEHA K  I
Sbjct: 4   EGEEDVPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVEVLTDAQVYSEHASKPNI 63

Query: 101 DCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPN 160
           DCDDVKLAIQSKVNFSFSQPPPREVLLELA +RNKIPLP+SI GPG+ LPP+QDTLLSPN
Sbjct: 64  DCDDVKLAIQSKVNFSFSQPPPREVLLELAASRNKIPLPKSIAGPGVPLPPEQDTLLSPN 123

Query: 161 YQLAIPRKRQVEAMEETEEDEGV--------DAVPSQELSTEVPQQHTPQRVSFPLSKRP 214
           YQL IP+K      EETE+DE +        +    Q+ ++++P Q TPQRVSFPLS+RP
Sbjct: 124 YQLVIPKKSVSTEPEETEDDEEMTDPGQSSQEQQQQQQQTSDLPSQ-TPQRVSFPLSRRP 183

[Close]
BLAST of Csor.00g084400 vs. ExPASy Swiss-Prot
Match: Q16594 (Transcription initiation factor TFIID subunit 9 OS=Homo sapiens OX=9606 GN=TAF9 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 5.7e-30
Identity = 73/163 (44.79%), Postives = 105/163 (64.42%), Query Frame = 0 

Query: 44  EDLPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCD 103
           + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA KA +D D
Sbjct: 10  KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query: 104 DVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQL 163
           DV+LAIQ + + SF+ PPPR+ LL++AR RN+ PLP      G  LPPD+  L +PNY+L
Sbjct: 70  DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129

Query: 164 -AIPRKRQVEAMEETEEDEGVDAVPSQELSTEVPQQHTPQRVS 206
            ++ +K    A   T     V +V S+  ST      TPQ +S
Sbjct: 130 KSLQKKASTSAGRITVPRLSVGSVTSRP-STPTLGTPTPQTMS 171

[Close]
BLAST of Csor.00g084400 vs. ExPASy Swiss-Prot
Match: Q8VI33 (Transcription initiation factor TFIID subunit 9 OS=Mus musculus OX=10090 GN=Taf9 PE=1 SV=1)

HSP 1 Score: 131.7 bits (330), Expect = 9.7e-30
Identity = 73/163 (44.79%), Postives = 105/163 (64.42%), Query Frame = 0 

Query: 44  EDLPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCD 103
           + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA KA +D D
Sbjct: 10  KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query: 104 DVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQL 163
           DV+LAIQ + + SF+ PPPR+ LL++AR RN+ PLP      G  LPPD+  L +PNY+L
Sbjct: 70  DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129

Query: 164 -AIPRKRQVEAMEETEEDEGVDAVPSQELSTEVPQQHTPQRVS 206
            ++ +K    A   T     V +V S+  ST      TPQ +S
Sbjct: 130 KSLQKKAPAPAGRITVPRLSVGSVSSRP-STPTLGTPTPQTMS 171

[Close]
BLAST of Csor.00g084400 vs. ExPASy Swiss-Prot
Match: Q62880 (Transcription initiation factor TFIID subunit 9B OS=Rattus norvegicus OX=10116 GN=Taf9b PE=2 SV=2)

HSP 1 Score: 131.0 bits (328), Expect = 1.7e-29
Identity = 61/120 (50.83%), Postives = 85/120 (70.83%), Query Frame = 0 

Query: 44  EDLPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCD 103
           ++ PRDA ++  +LK MG+ DYEPRVI+Q LE  +RYV  +L DA++YS HA K  +D D
Sbjct: 10  KNAPRDALVMAQILKDMGITDYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKPTVDAD 69

Query: 104 DVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQL 163
           DV+LAIQ + + SF+ PPPR+ LL++AR +N+ PLP      G  LPPD+  L +PNY+L
Sbjct: 70  DVRLAIQCRADQSFTSPPPRDFLLDIARQKNQTPLPLIKPYAGPRLPPDRYCLTAPNYRL 129

[Close]
BLAST of Csor.00g084400 vs. ExPASy Swiss-Prot
Match: Q17QQ4 (Transcription initiation factor TFIID subunit 9 OS=Bos taurus OX=9913 GN=TAF9 PE=2 SV=1)

HSP 1 Score: 130.2 bits (326), Expect = 2.8e-29
Identity = 72/163 (44.17%), Postives = 104/163 (63.80%), Query Frame = 0 

Query: 44  EDLPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCD 103
           + +P+DA+++  +LK MG+ +YEPRVI+Q LE  +RYV  +L DA++YS HA KA +D D
Sbjct: 10  KSMPKDAQMMAQILKDMGITEYEPRVINQMLEFAFRYVTTILDDAKIYSSHAKKATVDAD 69

Query: 104 DVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQL 163
           DV+LAIQ + + SF+ PPPR+ LL++AR RN+ PLP      G  LPPD+  L +PNY+L
Sbjct: 70  DVRLAIQCRADQSFTSPPPRDFLLDIARQRNQTPLPLIKPYSGPRLPPDRYCLTAPNYRL 129

Query: 164 -AIPRKRQVEAMEETEEDEGVDAVPSQELSTEVPQQHTPQRVS 206
            ++ +K    A   T     V +V S+  ST      TP  +S
Sbjct: 130 KSLQKKASASAGRITVPRLSVGSVTSRP-STPTLGTPTPPAMS 171

[Close]
BLAST of Csor.00g084400 vs. NCBI nr
Match: KAG6575445.1 (Transcription initiation factor TFIID subunit 9, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 416 bits (1070), Expect = 1.61e-146
Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0 

Query: 1   MSRGSGGGGGGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLKSM 60
           MSRGSGGGGGGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLKSM
Sbjct: 1   MSRGSGGGGGGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLKSM 60

Query: 61  GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP 120
           GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP
Sbjct: 61  GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP 120

Query: 121 PPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETEED 180
           PPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETEED
Sbjct: 121 PPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETEED 180

Query: 181 EGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT 215
           EGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT
Sbjct: 181 EGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT 215

[Close]
BLAST of Csor.00g084400 vs. NCBI nr
Match: XP_022953465.1 (transcription initiation factor TFIID subunit 9 [Cucurbita moschata])

HSP 1 Score: 409 bits (1050), Expect = 1.94e-143
Identity = 214/217 (98.62%), Postives = 214/217 (98.62%), Query Frame = 0 

Query: 1   MSRGSGGGGGGGGG--YDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLK 60
           MSRGSGGGGGGGGG  YDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLK
Sbjct: 1   MSRGSGGGGGGGGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLK 60

Query: 61  SMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFS 120
           SMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFS
Sbjct: 61  SMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFS 120

Query: 121 QPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETE 180
           QPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETE
Sbjct: 121 QPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETE 180

Query: 181 EDEGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT 215
           EDEGVDAVPSQE STEVPQQHTPQRVSFPLSKRPKIT
Sbjct: 181 EDEGVDAVPSQEPSTEVPQQHTPQRVSFPLSKRPKIT 217

[Close]
BLAST of Csor.00g084400 vs. NCBI nr
Match: KAG7013987.1 (Transcription initiation factor TFIID subunit 9 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 406 bits (1043), Expect = 1.82e-142
Identity = 211/215 (98.14%), Postives = 211/215 (98.14%), Query Frame = 0 

Query: 1   MSRGSGGGGGGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLKSM 60
           MSRGS    GGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLKSM
Sbjct: 1   MSRGS----GGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLKSM 60

Query: 61  GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP 120
           GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP
Sbjct: 61  GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP 120

Query: 121 PPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETEED 180
           PPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETEED
Sbjct: 121 PPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETEED 180

Query: 181 EGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT 215
           EGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT
Sbjct: 181 EGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT 211

[Close]
BLAST of Csor.00g084400 vs. NCBI nr
Match: XP_022992393.1 (transcription initiation factor TFIID subunit 9 [Cucurbita maxima])

HSP 1 Score: 396 bits (1018), Expect = 1.27e-138
Identity = 207/215 (96.28%), Postives = 209/215 (97.21%), Query Frame = 0 

Query: 1   MSRGSGGGGGGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLKSM 60
           MSRG  GGGGGGGGYDNQNTNFSPEAR SQLGDRGVKEMSEGDEDLPRDA+IVKTLLKSM
Sbjct: 1   MSRG--GGGGGGGGYDNQNTNFSPEARTSQLGDRGVKEMSEGDEDLPRDARIVKTLLKSM 60

Query: 61  GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP 120
           GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP
Sbjct: 61  GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP 120

Query: 121 PPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETEED 180
           PPREVLLELARNRNKIPLPRSIGGPGIALPPD DTLLSPNYQLAIP+KR VEAMEETEED
Sbjct: 121 PPREVLLELARNRNKIPLPRSIGGPGIALPPDIDTLLSPNYQLAIPKKRPVEAMEETEED 180

Query: 181 EGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT 215
           EGVD VPSQELSTEVPQQHTPQRVSFPLSKRPKIT
Sbjct: 181 EGVDTVPSQELSTEVPQQHTPQRVSFPLSKRPKIT 213

[Close]
BLAST of Csor.00g084400 vs. NCBI nr
Match: XP_022144675.1 (transcription initiation factor TFIID subunit 9 [Momordica charantia])

HSP 1 Score: 353 bits (907), Expect = 8.77e-122
Identity = 185/215 (86.05%), Postives = 196/215 (91.16%), Query Frame = 0 

Query: 1   MSRGSGGGGGGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLKSM 60
           MSRG+      GGGYDNQNTNFSPEARPSQLG+RG KE++EGDEDLPRDA+IVK LLKSM
Sbjct: 1   MSRGT------GGGYDNQNTNFSPEARPSQLGERGSKEVTEGDEDLPRDARIVKALLKSM 60

Query: 61  GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP 120
           GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHA KAAIDCDDVKLAIQSKVNFSFSQP
Sbjct: 61  GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHACKAAIDCDDVKLAIQSKVNFSFSQP 120

Query: 121 PPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETEED 180
           PPREVLLELARNRNKIPLPR+IGGPGIALPPD D L+SPNYQLAIP+K+ VE MEETEE+
Sbjct: 121 PPREVLLELARNRNKIPLPRTIGGPGIALPPDLDALVSPNYQLAIPKKQPVETMEETEEE 180

Query: 181 EGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT 215
           E VD   SQE STEVPQ HTPQRVSFPL+KRPKIT
Sbjct: 181 ENVDFASSQEPSTEVPQ-HTPQRVSFPLAKRPKIT 208

[Close]
BLAST of Csor.00g084400 vs. ExPASy TrEMBL
Match: A0A6J1GPP8 (transcription initiation factor TFIID subunit 9 OS=Cucurbita moschata OX=3662 GN=LOC111456006 PE=3 SV=1)

HSP 1 Score: 409 bits (1050), Expect = 9.38e-144
Identity = 214/217 (98.62%), Postives = 214/217 (98.62%), Query Frame = 0 

Query: 1   MSRGSGGGGGGGGG--YDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLK 60
           MSRGSGGGGGGGGG  YDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLK
Sbjct: 1   MSRGSGGGGGGGGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLK 60

Query: 61  SMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFS 120
           SMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFS
Sbjct: 61  SMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFS 120

Query: 121 QPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETE 180
           QPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETE
Sbjct: 121 QPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETE 180

Query: 181 EDEGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT 215
           EDEGVDAVPSQE STEVPQQHTPQRVSFPLSKRPKIT
Sbjct: 181 EDEGVDAVPSQEPSTEVPQQHTPQRVSFPLSKRPKIT 217

[Close]
BLAST of Csor.00g084400 vs. ExPASy TrEMBL
Match: A0A6J1JZ27 (transcription initiation factor TFIID subunit 9 OS=Cucurbita maxima OX=3661 GN=LOC111488713 PE=3 SV=1)

HSP 1 Score: 396 bits (1018), Expect = 6.14e-139
Identity = 207/215 (96.28%), Postives = 209/215 (97.21%), Query Frame = 0 

Query: 1   MSRGSGGGGGGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLKSM 60
           MSRG  GGGGGGGGYDNQNTNFSPEAR SQLGDRGVKEMSEGDEDLPRDA+IVKTLLKSM
Sbjct: 1   MSRG--GGGGGGGGYDNQNTNFSPEARTSQLGDRGVKEMSEGDEDLPRDARIVKTLLKSM 60

Query: 61  GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP 120
           GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP
Sbjct: 61  GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP 120

Query: 121 PPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETEED 180
           PPREVLLELARNRNKIPLPRSIGGPGIALPPD DTLLSPNYQLAIP+KR VEAMEETEED
Sbjct: 121 PPREVLLELARNRNKIPLPRSIGGPGIALPPDIDTLLSPNYQLAIPKKRPVEAMEETEED 180

Query: 181 EGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT 215
           EGVD VPSQELSTEVPQQHTPQRVSFPLSKRPKIT
Sbjct: 181 EGVDTVPSQELSTEVPQQHTPQRVSFPLSKRPKIT 213

[Close]
BLAST of Csor.00g084400 vs. ExPASy TrEMBL
Match: A0A6J1CSB1 (transcription initiation factor TFIID subunit 9 OS=Momordica charantia OX=3673 GN=LOC111014303 PE=3 SV=1)

HSP 1 Score: 353 bits (907), Expect = 4.25e-122
Identity = 185/215 (86.05%), Postives = 196/215 (91.16%), Query Frame = 0 

Query: 1   MSRGSGGGGGGGGGYDNQNTNFSPEARPSQLGDRGVKEMSEGDEDLPRDAKIVKTLLKSM 60
           MSRG+      GGGYDNQNTNFSPEARPSQLG+RG KE++EGDEDLPRDA+IVK LLKSM
Sbjct: 1   MSRGT------GGGYDNQNTNFSPEARPSQLGERGSKEVTEGDEDLPRDARIVKALLKSM 60

Query: 61  GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAIDCDDVKLAIQSKVNFSFSQP 120
           GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHA KAAIDCDDVKLAIQSKVNFSFSQP
Sbjct: 61  GVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHACKAAIDCDDVKLAIQSKVNFSFSQP 120

Query: 121 PPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPNYQLAIPRKRQVEAMEETEED 180
           PPREVLLELARNRNKIPLPR+IGGPGIALPPD D L+SPNYQLAIP+K+ VE MEETEE+
Sbjct: 121 PPREVLLELARNRNKIPLPRTIGGPGIALPPDLDALVSPNYQLAIPKKQPVETMEETEEE 180

Query: 181 EGVDAVPSQELSTEVPQQHTPQRVSFPLSKRPKIT 215
           E VD   SQE STEVPQ HTPQRVSFPL+KRPKIT
Sbjct: 181 ENVDFASSQEPSTEVPQ-HTPQRVSFPLAKRPKIT 208

[Close]
BLAST of Csor.00g084400 vs. ExPASy TrEMBL
Match: A0A1S4E4D8 (transcription initiation factor TFIID subunit 9 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103500691 PE=3 SV=1)

HSP 1 Score: 319 bits (818), Expect = 1.08e-108
Identity = 166/181 (91.71%), Postives = 173/181 (95.58%), Query Frame = 0 

Query: 37  KEMSEGDEDLPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAG 96
           KEMS+GDE+LPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAG
Sbjct: 18  KEMSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAG 77

Query: 97  KAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTL 156
           KAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTL
Sbjct: 78  KAAIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTL 137

Query: 157 LSPNYQLAIPRKRQVEAMEETEEDEGVDAV-PSQE-LSTEVPQQHTPQRVSFPLSKRPKI 215
           LSPNYQLAIP+K+ VE MEETEEDEG D V PSQE  S+EVPQQH PQRVSFPL+KRPK+
Sbjct: 138 LSPNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKL 197

[Close]
BLAST of Csor.00g084400 vs. ExPASy TrEMBL
Match: A0A1S3CGN5 (transcription initiation factor TFIID subunit 9 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103500691 PE=3 SV=1)

HSP 1 Score: 316 bits (809), Expect = 1.31e-107
Identity = 164/179 (91.62%), Postives = 171/179 (95.53%), Query Frame = 0 

Query: 39  MSEGDEDLPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 98
           MS+GDE+LPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA
Sbjct: 1   MSDGDEELPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKA 60

Query: 99  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 158
           AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS
Sbjct: 61  AIDCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLS 120

Query: 159 PNYQLAIPRKRQVEAMEETEEDEGVDAV-PSQE-LSTEVPQQHTPQRVSFPLSKRPKIT 215
           PNYQLAIP+K+ VE MEETEEDEG D V PSQE  S+EVPQQH PQRVSFPL+KRPK+T
Sbjct: 121 PNYQLAIPKKQAVETMEETEEDEGDDTVVPSQEPSSSEVPQQHAPQRVSFPLAKRPKLT 179

[Close]
BLAST of Csor.00g084400 vs. TAIR 10
Match: AT1G54140.1 (TATA binding protein associated factor 21kDa subunit )

HSP 1 Score: 260.8 bits (665), Expect = 9.9e-70
Identity = 134/181 (74.03%), Postives = 152/181 (83.98%), Query Frame = 0 

Query: 41  EGDEDLPRDAKIVKTLLKSMGVEDYEPRVIHQFLELWYRYVVDVLTDAQVYSEHAGKAAI 100
           EG+ED+PRDAKIVK+LLKSMGVEDYEPRVIHQFLELWYRYVV+VLTDAQVYSEHA K  I
Sbjct: 4   EGEEDVPRDAKIVKSLLKSMGVEDYEPRVIHQFLELWYRYVVEVLTDAQVYSEHASKPNI 63

Query: 101 DCDDVKLAIQSKVNFSFSQPPPREVLLELARNRNKIPLPRSIGGPGIALPPDQDTLLSPN 160
           DCDDVKLAIQSKVNFSFSQPPPREVLLELA +RNKIPLP+SI GPG+ LPP+QDTLLSPN
Sbjct: 64  DCDDVKLAIQSKVNFSFSQPPPREVLLELAASRNKIPLPKSIAGPGVPLPPEQDTLLSPN 123

Query: 161 YQLAIPRKRQVEAMEETEEDEGV--------DAVPSQELSTEVPQQHTPQRVSFPLSKRP 214
           YQL IP+K      EETE+DE +        +    Q+ ++++P Q TPQRVSFPLS+RP
Sbjct: 124 YQLVIPKKSVSTEPEETEDDEEMTDPGQSSQEQQQQQQQTSDLPSQ-TPQRVSFPLSRRP 183

The following BLAST results are available for this feature:
BLAST of Csor.00g084400 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q9SYH21.4e-6874.03Transcription initiation factor TFIID subunit 9 OS=Arabidopsis thaliana OX=3702 ... [more]
Q165945.7e-3044.79Transcription initiation factor TFIID subunit 9 OS=Homo sapiens OX=9606 GN=TAF9 ... [more]
Q8VI339.7e-3044.79Transcription initiation factor TFIID subunit 9 OS=Mus musculus OX=10090 GN=Taf9... [more]
Q628801.7e-2950.83Transcription initiation factor TFIID subunit 9B OS=Rattus norvegicus OX=10116 G... [more]
Q17QQ42.8e-2944.17Transcription initiation factor TFIID subunit 9 OS=Bos taurus OX=9913 GN=TAF9 PE... [more]
BLAST of Csor.00g084400 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6575445.11.61e-146100.00Transcription initiation factor TFIID subunit 9, partial [Cucurbita argyrosperma... [more]
XP_022953465.11.94e-14398.62transcription initiation factor TFIID subunit 9 [Cucurbita moschata][more]
KAG7013987.11.82e-14298.14Transcription initiation factor TFIID subunit 9 [Cucurbita argyrosperma subsp. a... [more]
XP_022992393.11.27e-13896.28transcription initiation factor TFIID subunit 9 [Cucurbita maxima][more]
XP_022144675.18.77e-12286.05transcription initiation factor TFIID subunit 9 [Momordica charantia][more]
BLAST of Csor.00g084400 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1GPP89.38e-14498.62transcription initiation factor TFIID subunit 9 OS=Cucurbita moschata OX=3662 GN... [more]
A0A6J1JZ276.14e-13996.28transcription initiation factor TFIID subunit 9 OS=Cucurbita maxima OX=3661 GN=L... [more]
A0A6J1CSB14.25e-12286.05transcription initiation factor TFIID subunit 9 OS=Momordica charantia OX=3673 G... [more]
A0A1S4E4D81.08e-10891.71transcription initiation factor TFIID subunit 9 isoform X1 OS=Cucumis melo OX=36... [more]
A0A1S3CGN51.31e-10791.62transcription initiation factor TFIID subunit 9 isoform X2 OS=Cucumis melo OX=36... [more]
BLAST of Csor.00g084400 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G54140.19.9e-7074.03TATA binding protein associated factor 21kDa subunit [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009072Histone-foldGENE3D1.10.20.10Histone, subunit Acoord: 47..114
e-value: 1.4E-30
score: 107.3
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 47..111
IPR003162Transcription initiation factor TAFII31PFAMPF02291TFIID-31kDacoord: 44..163
e-value: 1.2E-46
score: 157.7
IPR003162Transcription initiation factor TAFII31CDDcd07979TAF9coord: 47..163
e-value: 1.11716E-65
score: 196.299
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 31..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..45
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 169..215
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..205
NoneNo IPR availablePANTHERPTHR48068TAF9 RNA POLYMERASE II, TATA BOX-BINDING PROTEIN (TBP)-ASSOCIATED FACTORcoord: 38..198

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g084400.m01Csor.00g084400.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043966 histone H3 acetylation
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0051123 RNA polymerase II preinitiation complex assembly
biological_process GO:0006352 DNA-templated transcription, initiation
cellular_component GO:0000124 SAGA complex
cellular_component GO:0005669 transcription factor TFIID complex
molecular_function GO:0046982 protein heterodimerization activity
molecular_function GO:0016251 RNA polymerase II general transcription initiation factor activity
molecular_function GO:0003713 transcription coactivator activity