Csor.00g075380 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGATGGTGAACGACGACTGGCTTACGGCGGCCATGGCCGATGATGGAGTGGTGGTCGAGTTGTTGGTGCGGTTGAAGCAATCGCAGGCTGTGTCGCCTTCCAAATCTCCGCTTCCGGTGACGGTGCCTTTCACTTGGGGGATTAGGCAGCTGAGGTCTAGAACGGCGACGACGGTTGGTAGATGTGGCGATGGTGTCTTGGTGAGGAACAATAAGGATGTTGACTCAACCAGATGGAGTCCTACGACGCCGCTTTCGTGGAGCGGTGGAGGTTCGCCTTCTGCTACGCTTGACGGTTATGAGGAGTCTAGCCGTCCGGCTACGCTCTCGCACGCTGCTTCCAGATTTAAGGTTCTTGACTTTTTCTCACTATTCTTATGATTTTGTGTCCTCTGTTTTGGATTTTTGCAGTTTCGTCTCTTATCTCGACTCTGTGTGCGCTCTGCTTTCCCGATCTTTGCGGTTTTTTTTTGCTACGAGTTCTTAAATCTTAGCGCTGGCGTTCTTAATTACGGTTTTCCTTTGGCGGTGGTGTCGGCTGTGGAGTTCAGCGGTCTGGATTCTCTCATGAAACATTCTTATCTCGGAGAACCATCGTATATTGTGTTGTGATTGTTTAGCCATTTGTTTTTCCAAGAATCCGATTCTGATTCCGTATCATGAAACATCTCTTGATTTCCTCGTCATTTTCTTCTACAGCTTAACGCAACAAAATTCCTCTCTCAGAGCTCACACAACTGCAAATCTCTCAATTCCATAACTGCTCTGTATTTTCACCAAACAGTTTCAAGTTCTCGCCATCAATGGCGGACAACCTTCACGAATCACCGTTTGAGAAACTGCTTTTTAATTCAAAAATCCCCGATATACCCCTAGATTCTCCAATCACGTTCACGTGAAGAGACGAGGTCAGCGGATGAACGCTGCTTGAAATTACTTCGCGTTTTCTCCTCGCCTCGATTCAAATCGCCTGTGGACTCGAATTCACTTATTTCTTCAATTTGACCAAAACGCCCTTCCAATCCCTCGCTAGATTCCAAAGCCTTTCAAATCGTACACCGAGTCGATATTTCGTCACACACGAGACTTCCCTATAGAAACTCTCTTCCATCGCCGACGGTTTACTCATGGACCGTTGAAAGCGCCTGGAAACTTCCCTACGGCCATTGTCCTTTCTAATTTTTACCATACTACCCCTTGACGCGTAAAAGATTCATCACAAAGCACGAGGGTATTCTGGTCACACACACACACATACACAAATTCCGAGCCGGTTCGATCGAACCGGATGCCAGATTCGACGGTGGATGACACTGCAAAGTGAGGGCCCAAATCAGATCAGGTAAAGAGGAGAGGCGTTCATAAGAGATAGGTCTGCGTTAGGTTTGAAGAGTAATTATCAGGTGTGGCGATGGTACATGGTTGGTTCCAGTGTTCCCTTACTGGAAACCCATTATTTATAATTTTCATGGATTTGAATTGGCATCATGAAAATGGTTGGAAGAAGAACAATAAAATAATGGAATTGTTGTTTAAGTTGTTGGGCCATTAGAGAGGATGGGAATAGGATAAAGGAAGATCCACGTGACCGAGTCACGCGGGGTGGGAATACAAAACAGGAGCCGGTGTGGGTGTGGTCGCAACGAAGTCTTAAAGTGACCACGTGGAATTCATGATGTGGCGTGCGATTCTGGTAAATGCAAAATTGGGTGATATTTTTTGTGGAAAGAGAAATGGGCTTAGTCCATGTGGAATTCATGATGTGGCGTTCATCTCTTTGCCTTGACTGCTAGTTCTACCTTCAAACTTGGTGTTAGTAAATCATTCTTGTCAATTCGTTTGGATTTTTGTCTTCTAATCTTGATTCTCGTTAATGGGTTTAGACTTGAATTAAACTTTATGTTATTTGTTTATGATTCCGATTCTTATTAATGGGTTTAGAGTTGACTTTTGATCCTTATTTATGAGCTTGGAGTTGACTTGAACTTAGTTTATATGTGTTTGGATTTGGTGTTTTCAGGGTGCTGCTGCAAATGAATCCGGAGCTGGTACTGCAACAAAGAGATTAAGACGTAAGAAGGTAATTTCTTAAAGAATGTTGTTGAAAATAGATAATGGGTTTGTTGGGGTGTGGCTGTATGAGCCAAGCATTTGTTTGTTGCCGACGTTAGATGAGTTGTTGGCTTGCATTGTTCTAGAAGAATGCATGGTTGGTTCAACCACTAATTGTAACGAAGCTTGTTTTACTGTTGTTTAATGATGAAATACTCTTGTTGTTTGTTTTCCAGACATTTGCTGAACTTAAAGAAGAGGAGAGCGTGCTTTTGAATGAGAAAATTCATCTCAAAAAGGTATAATTTTAATATTGTTTTTATGGGTAGAACAACAACCTTTTTTCTTTTTTGAAAATTGGTAGAACAACAACTTTAAAGTTGTAATTTCTTTTATATATTCCGGGTCTTTTTAGCCTTTTTCTTTAATATATATATTGAATCTAACGTAGATGAAAAGTCCCACGTTGGTTAATTTAGGGAATGATCATAGGTTTATAATCGATGAATATTATCTCTATTGATATGAGGCCTTTTGGGGAAGCCCAAAAGCAAAGCTATGAGAGTTTATGTTCGAAATGGACAATATCATACCATTGTGGAGACTAGTGTTCATCTAACATTGCCTTATCTTGTTCGTGATTTTGATGACCGAACTTACTTTTTGAACAGGAACTTGCCAATCTAAGAGCTACCTTCGAAGAACAAAGAGCCAAGAATGAGAGTTTGAAGAAAATGAAGGTAAGCAATTGTCTGCTTTCTTTTTCCATGAACACCTGAACTATACTGTCTTTTTGCCTTTGTAAAGTTTCAAAAAGATTGAACAGAAAAGATTCTCGAATTTCCCTTCACCTAAAGCACTAACTTATCAAACAAAGCAATCTCTAAAACAATCTCTTGCTTGCTTGCTTTTACTTTATGAACGAACAGGTGGATTTCAACATGAAATACGCAGAAAAATTCAATACAAACTCCAAGATGATGATGATGATGCAAGAGGATTCTTCATCCACACTAACCCGTCAAAGGGAAAGCTCTAACATTGAAGCAATTCCTCCAACATTGCTGCCACTCACCGGGGCAGGTTCGGGGAGGTTCGAGGCTCAATTGCAGACGAAAATCAAATCATCAACCGAAGACGATTGCGTCTTTTTCTTACCGGATTTGAATATGACACCCTCAGAGGATTGA ATGATGGTGAACGACGACTGGCTTACGGCGGCCATGGCCGATGATGGAGTGGTGGTCGAGTTGTTGGTGCGGTTGAAGCAATCGCAGGCTGTGTCGCCTTCCAAATCTCCGCTTCCGGTGACGGTGCCTTTCACTTGGGGGATTAGGCAGCTGAGGTCTAGAACGGCGACGACGGTTGGTAGATGTGGCGATGGTGTCTTGGTGAGGAACAATAAGGATGTTGACTCAACCAGATGGAGTCCTACGACGCCGCTTTCGTGGAGCGGTGGAGGTTCGCCTTCTGCTACGCTTGACGGTTATGAGGAGTCTAGCCGTCCGGCTACGCTCTCGCACGCTGCTTCCAGATTTAAGGGTGCTGCTGCAAATGAATCCGGAGCTGGTACTGCAACAAAGAGATTAAGACGTAAGAAGACATTTGCTGAACTTAAAGAAGAGGAGAGCGTGCTTTTGAATGAGAAAATTCATCTCAAAAAGGAACTTGCCAATCTAAGAGCTACCTTCGAAGAACAAAGAGCCAAGAATGAGAGTTTGAAGAAAATGAAGGTGGATTTCAACATGAAATACGCAGAAAAATTCAATACAAACTCCAAGATGATGATGATGATGCAAGAGGATTCTTCATCCACACTAACCCGTCAAAGGGAAAGCTCTAACATTGAAGCAATTCCTCCAACATTGCTGCCACTCACCGGGGCAGGTTCGGGGAGGTTCGAGGCTCAATTGCAGACGAAAATCAAATCATCAACCGAAGACGATTGCGTCTTTTTCTTACCGGATTTGAATATGACACCCTCAGAGGATTGA ATGATGGTGAACGACGACTGGCTTACGGCGGCCATGGCCGATGATGGAGTGGTGGTCGAGTTGTTGGTGCGGTTGAAGCAATCGCAGGCTGTGTCGCCTTCCAAATCTCCGCTTCCGGTGACGGTGCCTTTCACTTGGGGGATTAGGCAGCTGAGGTCTAGAACGGCGACGACGGTTGGTAGATGTGGCGATGGTGTCTTGGTGAGGAACAATAAGGATGTTGACTCAACCAGATGGAGTCCTACGACGCCGCTTTCGTGGAGCGGTGGAGGTTCGCCTTCTGCTACGCTTGACGGTTATGAGGAGTCTAGCCGTCCGGCTACGCTCTCGCACGCTGCTTCCAGATTTAAGGGTGCTGCTGCAAATGAATCCGGAGCTGGTACTGCAACAAAGAGATTAAGACGTAAGAAGACATTTGCTGAACTTAAAGAAGAGGAGAGCGTGCTTTTGAATGAGAAAATTCATCTCAAAAAGGAACTTGCCAATCTAAGAGCTACCTTCGAAGAACAAAGAGCCAAGAATGAGAGTTTGAAGAAAATGAAGGTGGATTTCAACATGAAATACGCAGAAAAATTCAATACAAACTCCAAGATGATGATGATGATGCAAGAGGATTCTTCATCCACACTAACCCGTCAAAGGGAAAGCTCTAACATTGAAGCAATTCCTCCAACATTGCTGCCACTCACCGGGGCAGGTTCGGGGAGGTTCGAGGCTCAATTGCAGACGAAAATCAAATCATCAACCGAAGACGATTGCGTCTTTTTCTTACCGGATTTGAATATGACACCCTCAGAGGATTGA MMVNDDWLTAAMADDGVVVELLVRLKQSQAVSPSKSPLPVTVPFTWGIRQLRSRTATTVGRCGDGVLVRNNKDVDSTRWSPTTPLSWSGGGSPSATLDGYEESSRPATLSHAASRFKGAAANESGAGTATKRLRRKKTFAELKEEESVLLNEKIHLKKELANLRATFEEQRAKNESLKKMKVDFNMKYAEKFNTNSKMMMMMQEDSSSTLTRQRESSNIEAIPPTLLPLTGAGSGRFEAQLQTKIKSSTEDDCVFFLPDLNMTPSED Homology
BLAST of Csor.00g075380 vs. NCBI nr
Match: KAG6608135.1 (hypothetical protein SDJN03_01477, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 509 bits (1311), Expect = 1.59e-181 Identity = 267/267 (100.00%), Postives = 267/267 (100.00%), Query Frame = 0
BLAST of Csor.00g075380 vs. NCBI nr
Match: XP_023523262.1 (uncharacterized protein LOC111787510 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 498 bits (1282), Expect = 4.35e-177 Identity = 264/268 (98.51%), Postives = 264/268 (98.51%), Query Frame = 0
BLAST of Csor.00g075380 vs. NCBI nr
Match: XP_022940407.1 (uncharacterized protein LOC111446021 [Cucurbita moschata]) HSP 1 Score: 489 bits (1258), Expect = 1.84e-173 Identity = 259/267 (97.00%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of Csor.00g075380 vs. NCBI nr
Match: XP_022981042.1 (uncharacterized protein LOC111480308 isoform X2 [Cucurbita maxima]) HSP 1 Score: 486 bits (1251), Expect = 2.15e-172 Identity = 258/267 (96.63%), Postives = 259/267 (97.00%), Query Frame = 0
BLAST of Csor.00g075380 vs. NCBI nr
Match: XP_022981041.1 (uncharacterized protein LOC111480308 isoform X1 [Cucurbita maxima]) HSP 1 Score: 481 bits (1239), Expect = 1.50e-170 Identity = 258/268 (96.27%), Postives = 259/268 (96.64%), Query Frame = 0
BLAST of Csor.00g075380 vs. ExPASy TrEMBL
Match: A0A6J1FJI3 (uncharacterized protein LOC111446021 OS=Cucurbita moschata OX=3662 GN=LOC111446021 PE=4 SV=1) HSP 1 Score: 489 bits (1258), Expect = 8.92e-174 Identity = 259/267 (97.00%), Postives = 260/267 (97.38%), Query Frame = 0
BLAST of Csor.00g075380 vs. ExPASy TrEMBL
Match: A0A6J1ISW2 (uncharacterized protein LOC111480308 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111480308 PE=4 SV=1) HSP 1 Score: 486 bits (1251), Expect = 1.04e-172 Identity = 258/267 (96.63%), Postives = 259/267 (97.00%), Query Frame = 0
BLAST of Csor.00g075380 vs. ExPASy TrEMBL
Match: A0A6J1IVD4 (uncharacterized protein LOC111480308 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111480308 PE=4 SV=1) HSP 1 Score: 481 bits (1239), Expect = 7.27e-171 Identity = 258/268 (96.27%), Postives = 259/268 (96.64%), Query Frame = 0
BLAST of Csor.00g075380 vs. ExPASy TrEMBL
Match: A0A6J1IIT2 (uncharacterized protein LOC111476653 OS=Cucurbita maxima OX=3661 GN=LOC111476653 PE=4 SV=1) HSP 1 Score: 359 bits (921), Expect = 1.80e-122 Identity = 204/271 (75.28%), Postives = 219/271 (80.81%), Query Frame = 0
BLAST of Csor.00g075380 vs. ExPASy TrEMBL
Match: A0A6J1FA47 (uncharacterized protein LOC111443668 OS=Cucurbita moschata OX=3662 GN=LOC111443668 PE=4 SV=1) HSP 1 Score: 354 bits (908), Expect = 1.76e-120 Identity = 202/272 (74.26%), Postives = 220/272 (80.88%), Query Frame = 0
BLAST of Csor.00g075380 vs. TAIR 10
Match: AT4G32030.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 63 Blast hits to 59 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 6; Fungi - 0; Plants - 53; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). ) HSP 1 Score: 147.9 bits (372), Expect = 1.2e-35 Identity = 104/268 (38.81%), Postives = 145/268 (54.10%), Query Frame = 0
BLAST of Csor.00g075380 vs. TAIR 10
Match: AT4G32030.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 111.3 bits (277), Expect = 1.2e-24 Identity = 71/159 (44.65%), Postives = 96/159 (60.38%), Query Frame = 0
BLAST of Csor.00g075380 vs. TAIR 10
Match: AT1G15800.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G80610.1); Has 56 Blast hits to 52 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 56; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 108.2 bits (269), Expect = 1.0e-23 Identity = 78/190 (41.05%), Postives = 106/190 (55.79%), Query Frame = 0
BLAST of Csor.00g075380 vs. TAIR 10
Match: AT1G80610.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15800.1); Has 73 Blast hits to 69 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 2; Fungi - 2; Plants - 55; Viruses - 0; Other Eukaryotes - 14 (source: NCBI BLink). ) HSP 1 Score: 101.7 bits (252), Expect = 9.5e-22 Identity = 79/200 (39.50%), Postives = 103/200 (51.50%), Query Frame = 0
BLAST of Csor.00g075380 vs. TAIR 10
Match: AT5G25210.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32030.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 65.5 bits (158), Expect = 7.6e-11 Identity = 58/198 (29.29%), Postives = 84/198 (42.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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