Csor.00g066020 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGAGGCTAATGAGAGAATTTGGCAGTCAAAATGGCAGCTTTGGCCTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCACCATAATTTTCTCTTGCTCCGACGGCATGTCAACAAAAGACAGGAATTCCACGGCCGACGTTGAGCTTTACGGTGCCGGTTGCGCCGCCGGCTGCGGCGCTGGATGTGGTGCTTGA ATGGCGAGGCTAATGAGAGAATTTGGCAGTCAAAATGGCAGCTTTGGCCTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCACCATAATTTTCTCTTGCTCCGACGGCATGTCAACAAAAGACAGGAATTCCACGGCCGACGTTGAGCTTTACGGTGCCGGTTGCGCCGCCGGCTGCGGCGCTGGATGTGGTGCTTGA ATGGCGAGGCTAATGAGAGAATTTGGCAGTCAAAATGGCAGCTTTGGCCTCGCCGGTGACATTTATTTGCTGTTTTGGGCGGCTCTGTTTACACTCTGCATAATCTCCACCATAATTTTCTCTTGCTCCGACGGCATGTCAACAAAAGACAGGAATTCCACGGCCGACGTTGAGCTTTACGGTGCCGGTTGCGCCGCCGGCTGCGGCGCTGGATGTGGTGCTTGA MARLMREFGSQNGSFGLAGDIYLLFWAALFTLCIISTIIFSCSDGMSTKDRNSTADVELYGAGCAAGCGAGCGA Homology
BLAST of Csor.00g066020 vs. NCBI nr
Match: KAG6584341.1 (hypothetical protein SDJN03_20273, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 147 bits (371), Expect = 1.78e-44 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Csor.00g066020 vs. NCBI nr
Match: KAE8652552.1 (hypothetical protein Csa_013579 [Cucumis sativus]) HSP 1 Score: 120 bits (301), Expect = 1.94e-33 Identity = 64/75 (85.33%), Postives = 66/75 (88.00%), Query Frame = 0
BLAST of Csor.00g066020 vs. NCBI nr
Match: KAG6572949.1 (hypothetical protein SDJN03_26836, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 102 bits (253), Expect = 1.58e-26 Identity = 55/70 (78.57%), Postives = 60/70 (85.71%), Query Frame = 0
BLAST of Csor.00g066020 vs. NCBI nr
Match: ONI09219.1 (hypothetical protein PRUPE_5G224700 [Prunus persica]) HSP 1 Score: 84.7 bits (208), Expect = 1.24e-19 Identity = 41/74 (55.41%), Postives = 57/74 (77.03%), Query Frame = 0
BLAST of Csor.00g066020 vs. NCBI nr
Match: CAB4281319.1 (unnamed protein product [Prunus armeniaca] >CAB4311731.1 unnamed protein product [Prunus armeniaca]) HSP 1 Score: 84.7 bits (208), Expect = 1.24e-19 Identity = 42/74 (56.76%), Postives = 56/74 (75.68%), Query Frame = 0
BLAST of Csor.00g066020 vs. ExPASy TrEMBL
Match: A0A0A0LQU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G042580 PE=4 SV=1) HSP 1 Score: 120 bits (301), Expect = 4.16e-34 Identity = 64/75 (85.33%), Postives = 66/75 (88.00%), Query Frame = 0
BLAST of Csor.00g066020 vs. ExPASy TrEMBL
Match: M5WF59 (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_5G224700 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.01e-20 Identity = 41/74 (55.41%), Postives = 57/74 (77.03%), Query Frame = 0
BLAST of Csor.00g066020 vs. ExPASy TrEMBL
Match: A0A6J5UX91 (Uncharacterized protein OS=Prunus armeniaca OX=36596 GN=CURHAP_LOCUS34361 PE=4 SV=1) HSP 1 Score: 84.7 bits (208), Expect = 6.01e-20 Identity = 42/74 (56.76%), Postives = 56/74 (75.68%), Query Frame = 0
BLAST of Csor.00g066020 vs. ExPASy TrEMBL
Match: A0A6P3ZT85 (uncharacterized protein LOC107418606 OS=Ziziphus jujuba OX=326968 GN=LOC107418606 PE=4 SV=1) HSP 1 Score: 82.0 bits (201), Expect = 6.65e-19 Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 0
BLAST of Csor.00g066020 vs. ExPASy TrEMBL
Match: A0A803R005 (Uncharacterized protein OS=Cannabis sativa OX=3483 PE=4 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 2.46e-17 Identity = 43/75 (57.33%), Postives = 52/75 (69.33%), Query Frame = 0
BLAST of Csor.00g066020 vs. TAIR 10
Match: AT1G68238.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 47.8 bits (112), Expect = 4.5e-06 Identity = 24/55 (43.64%), Postives = 33/55 (60.00%), Query Frame = 0
BLAST of Csor.00g066020 vs. TAIR 10
Match: AT3G18250.1 (Putative membrane lipoprotein ) HSP 1 Score: 42.0 bits (97), Expect = 2.5e-04 Identity = 23/57 (40.35%), Postives = 35/57 (61.40%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|