Csor.00g064160 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g064160
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionProtein transport protein Sec61 subunit gamma
LocationCsor_Chr13: 9453884 .. 9458366 (-)
RNA-Seq ExpressionCsor.00g064160
SyntenyCsor.00g064160
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCGCGCTTCAAGATTCAAATCACAAACCCTTGATTCCGTTAACAATTGTAATTTCTACTGTTTTCTGTTAAATTTTGGTACTAGTTCCTGTCTGCCCTAATTTTTCATTGCTTTCTGAACCGAATCATCGACAATGTAGCTTACTGCGTCTTGGAGTTCCCCCAATTTTATTCATCTTGATGTTGCAGCAAAATTATGCCAATCCGTCGTATGTTTCTACAAAACAAACCTAAATCATCATCTTTAGCATTCCTGAAAATTTCACTGAGAATCGAATCCAGATTTTAGTTCTCTGAAGCCCCGTGCATTATGATGTGCTTTAATGCTGTTCTACTGGTGTTGCTTTTCATGTTTTTGCTCTACTTCATTTGATTTGCAGAAGCTTCAAGGAGTGATCCTCGAAACACAAAGGAATGCAAAAATTCAGGTAATTGAACTGAACTTATCAATGGTAGATATAAACTTCGCATTTTAGATCAATTAGACTGCTAAGATAGAGATGAGAACGGATTCTGTTTACCATACTCACCATTGGCTTATTCTTTTGAATTCATTACTAATTTTACAAAAGATTAAGAATCTTATAATCTAACAACTGCAGGGACTTTCAGTTTTGAGTTTAATAGCTTCTTGAACTTGAAAGACTCCCATAAGTCCATAATCTATCGAATATAATGTTCAAAGACCTTGTTGCATTAAACCTTTTTTAGCTTCACAGACCAATTAGAATCAGCCTAGAGATTTTAGGGACCCATATGGAACATAGGTATCGTGTTAGAAGAGAGTAGACTTATGACTTATAGAACAAGAAGCATTCGTTATTATGACAGACCAATATTTAGAAGCAAGGTTGATAGAGAATTTTGTGGAAGAAATCACGACTCTTCGTAATGGTATTATATTGTCTACCTTGAGCTTTAGCTCTCATGGATAAAGACCTGCTACCAATGGAGATGTATTCCTTACTTATAACTCAATGATCTTCCTTTTAATTAGTCAACGTGTGACTCCTTCCCAACAATCCTCTCCTTAATCGAGGATCGATTCCTTCTCTTGAGCCCTTGAACAAAGTACAACCTTTGTTCGACACTTGAGTCACTTTTGACTACACTTTCGAGGCTCACAACTTCTTTGTTCAACATTTGAGGATTCGTAACATGGTATCAAAATCATGGACCTTTCACAATGGTATGATATTGTCCACTTTGAGCACAAGCTCTCATGCTTATGCTTTGCTTTTGGTTTCTCCAAATACTTATAAACCCATGATCAACTCCTTAATTAGATGACGTAGGACTCTTCTCCGAACAATCCTCAAAGCGAGAAGTGATTGAGATTTTGATGGCTGCATATATAGAATCATGGCTACAAAAGTGACTTGTGTGTATACCTTCACAGCTGATTTAGGGGACTCCCAAGGACAGGAAGAACCCATGAGGAAGATCATAGACTAGTTGGATTTCCATGAATGACTAGTTCGAATCCTGTTTAGTTCAAGCTATTGAAGCCATCGTGAGCATAGCCTAACCGTTGTCGGTGTGTCCTAAACCACCTGAACATTAGTGTTCAAGTTATCATCTCAACCTAAAAACGAAAGCTAAAGTTCTTTTTTCTTCTATTCTTTTCATGATTTTTAATGGTTAAATTATAAAATTAAATACTCCTAAACCATGAGAACTACGAGGTTGCTTTCAATAATACTCGTGAACTCTTAAAAGTTCACTTTTAACTCTTGAAATATTAAGTTTTTCAAAATAACCCTAAAAAATTAAAAATTGTAAATGTAGAAGAAACTAAATTGTCTTTTTGTTATTCGATAAAGATTTAATTGAAAAAATACTCAAACTTAGAAAGATCAAATCATAAATTCCGCTTAAGAGAATCCAAGTAACTTAATTTTTTACGGCTTTGCTACTTATCATACTTTAGCTCTATGCAAACATACAATAAATAGTGATGTCCACGAGGTGGAGCATGGACGAGGAAGTTTTTGCTGTTCTGTCTCCGCTCCTTATTTCATTTTAATGTCTGTGAGAATATTTCTTTCAAATAATTTTTTAATAGATAATTTTCATCTTTTAAAATTATAATTTTAGTTAAAAAATGTAAAATATTATTTAATATAATTTCTGAAAAAATATATATATACTAGTGGGATAAAATCTCTCTTAATTCCCTCCCCTATTTTCTGTTTAAACTAAAAACCCTATTTTCGTTTAAATTAAATTTACCATTTTGGGCAGGTCAATTGGCATCTCTATAAATGATAGCTCAAGGGTATTTCTGTCATTTCAAATATTTCGGCGGCCCATCAATTTTGACCCAATCTCCCTAGTCTTGCAGCGCTCAAAGCATTTCTTTTCTTCCTTCATACCCCCACACGCCCCCAACCCGTTCAAATCTGAATCCAAATTTCGCAAAACATTTCTTTTGTCGACGTTCCCTTTGCATCTCGGAGAAATGGATGCCGTAGATTCTGTTGTTGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGGTGTCATAAACCCGATCGCAAGGGTATGTTTCTTTCTTTGACATTATATTGCATAGATCTGATTCAATCGAAGTCACAGATTCCGTTTTCCGTTTCAATTTGACTTATTCAACATTTTGGTGGTGCAGAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGCTTCGTTGTGATGGGATTTGTAGGGTTCTTTGTCAAGCTAATCTTCATTCCGATCAACAATATCATCGTCGGATCTGGTTAGATTAGGTATGCATCCAATCTAATAGATCTTCTAATTTTCTCTTCGATCTGGCTTGTTTGTGTTCTGCATCGTGCTCATCTTATTGAAGATTTTTGCAATTACGGAACGGTTCGATAATTCCTTAAATTTTCGTTCGATGCACGTCCATGCAATGCCTACCGAATAGCATGATATTGTATATTCAGGCACGATCGATCCAAACGATTGAAGATCGTACGACTAGCATCCATGCTTTTTATAACGCTCCTCATATTCAAGACGTTCTTGCTGTGGATTTGCGTTTATTTTCTTCCAATATGTCTTCGTTTATGGTTGAGAAGGAGAATCGTTAGGAAACATTATTGAAGCAGCTCTCTGTTAGTTAGTTCCTACGCTGCTATCCTTGTAGGTGTGAACTTTTCTGAGTGCCAATCTTCTGATGTTGTGGTTTTAATATTAGTCTAGTTTGTAGTTCACTTTTCTTCTCTGTATGTTAAACTATAAATTTTGTATTTTTCTTAATGCCCTAGGGAGTTCACTTCTTGTCTTCATCCTCTTTGAAACTTTAAGAACATCTTAATGGCAATATTGTTTATCATGCTTCTCGGAGAAACTTTGAAAGGAATTATTTTAGATATCTATATAATGAACCGGTTGTGGATTGTTAGCATTTCCTCTGCTCGCCTATATCTTAGTGTGCATGCGTTTCAAATCTTAGTCACCTGAGAAACAATTGTTGATTAGAGATGAGAGCAGGGCAGATCCCAGATGGAAGTAGATTCCCCACTTAGTTTACTGTAAACTGAAAAGGTATATATAAATTACTTAAGTTCTGTAGTTTTCCTCTAATTTGAGTGATGGAAAGTGATGGAGGCTTGAAGTGTGAAGATATTAAAACAGAGGTGTAACTGTTGAAGGAATGTTCAGTTTGCTAACAAACATCGAAACCAAAAGGTTCAAAGTGAGAAACTCTGGAAGCAGAGTGCAGGAATCGGACCCCTGTATTTGGAATTTACAGGGACTGAAGTATGTAGTGGTAGTTATGTGTGAATAACATTAATATTTGTATAACATGCATTTGAATGCCCATCAGGCAACCAAAGAAAGAAAGCATTAGAAAGAGAATTTAGAGAATAAACAATTAGGAGTTGGATGCTGTATTTTGGAATGGCACAGCACTACAATTGTGAAACCTGACCCTACATATTCATGCTTGCCAACCAAATGCTCCTTCAGAATATATAGTTTTTTTTTTGTGTTAAATCCAGTAGGTGAGAGTTCCTTGTGTTAAATTAAATCTATCTTTATGCTTTCCTTGAAATGTTTCTTTGTAGTCCATAGTTTACATCTTTAACGCATTATTTTGGGACCATCTTTTCCACTTAATGTGGCTGATTGATATTCCTCGCATTAGATCTGCCTGTTTCCTTCCTTCAGATTCATGTATTTATGTTCATGAAACTGGTTATTGGTTTTATTATAAAATAAATGTAATTTCAGTTCAGTGATTAGATCCATGGAAATCAATTTAATGCGTTCTTCTCGATGCTCGATAGGGCGAATGTGTACCCTGTGTTCAATACCCCAACACCCCCATCATTTATTTTCTCTTCCAGCCACTGCACCCTCAATCGTGTTAAATACTGTCAGCCTACGACACTGTTAATTAGACACTAATTCTGTTTTGCCAATGAATTTTCAGGTCATGATGAAGTTCGTAAATGA

mRNA sequence

ATGGCCGCGCTTCAAGATTCAAATCACAAACCCTTGATTCCGTTAACAATTAAGCTTCAAGGAGTGATCCTCGAAACACAAAGGAATGCAAAAATTCAGCGCTCAAAGCATTTCTTTTCTTCCTTCATACCCCCACACGCCCCCAACCCGTTCAAATCTGAATCCAAATTTCGCAAAACATTTCTTTTGTCGACGTTCCCTTTGCATCTCGGAGAAATGGATGCCGTAGATTCTGTTGTTGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGGTGTCATAAACCCGATCGCAAGGAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGCTTCGTTGTGATGGGATTTGTAGGATTAGGTCATGATGAAGTTCGTAAATGA

Coding sequence (CDS)

ATGGCCGCGCTTCAAGATTCAAATCACAAACCCTTGATTCCGTTAACAATTAAGCTTCAAGGAGTGATCCTCGAAACACAAAGGAATGCAAAAATTCAGCGCTCAAAGCATTTCTTTTCTTCCTTCATACCCCCACACGCCCCCAACCCGTTCAAATCTGAATCCAAATTTCGCAAAACATTTCTTTTGTCGACGTTCCCTTTGCATCTCGGAGAAATGGATGCCGTAGATTCTGTTGTTGATCCTCTCAGAGAGTTCGCCAAGGACAGCGTTCGTCTCGTTAAGAGGTGTCATAAACCCGATCGCAAGGAATTCACCAAGGTTGCCGTTCGTACCGCTATCGGCTTCGTTGTGATGGGATTTGTAGGATTAGGTCATGATGAAGTTCGTAAATGA

Protein sequence

MAALQDSNHKPLIPLTIKLQGVILETQRNAKIQRSKHFFSSFIPPHAPNPFKSESKFRKTFLLSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGLGHDEVRK
Homology
[Close]
BLAST of Csor.00g064160 vs. ExPASy Swiss-Prot
Match: P38385 (Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0178400 PE=3 SV=1)

HSP 1 Score: 103.2 bits (256), Expect = 2.3e-21
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0 

Query: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 124
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA RTAIGFVVMGFVG
Sbjct: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAARTAIGFVVMGFVG 51

[Close]
BLAST of Csor.00g064160 vs. ExPASy Swiss-Prot
Match: P0DI74 (Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 GN=SEC61G1 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-21
Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 124
           MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG
Sbjct: 1   MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 51

[Close]
BLAST of Csor.00g064160 vs. ExPASy Swiss-Prot
Match: P0DI75 (Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 GN=SEC61G2 PE=1 SV=1)

HSP 1 Score: 102.8 bits (255), Expect = 3.0e-21
Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 124
           MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG
Sbjct: 1   MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 51

[Close]
BLAST of Csor.00g064160 vs. ExPASy Swiss-Prot
Match: Q9SMP2 (Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 GN=SEC61G3 PE=1 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 3.6e-19
Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 0 

Query: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 124
           M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVG
Sbjct: 1   MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVG 51

[Close]
BLAST of Csor.00g064160 vs. ExPASy Swiss-Prot
Match: Q7Z1B8 (Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=213494 GN=SEC61G PE=3 SV=1)

HSP 1 Score: 78.6 bits (192), Expect = 6.0e-14
Identity = 35/51 (68.63%), Postives = 42/51 (82.35%), Query Frame = 0 

Query: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 124
           MD V   ++P R+FAKDS+RLVKRC KPDRKEF K+AV TAIGF +MGF+G
Sbjct: 1   MDQVTKFIEPGRQFAKDSIRLVKRCTKPDRKEFQKIAVATAIGFCIMGFIG 51

[Close]
BLAST of Csor.00g064160 vs. NCBI nr
Match: KAG6584155.1 (Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 266 bits (680), Expect = 8.20e-90
Identity = 131/131 (100.00%), Postives = 131/131 (100.00%), Query Frame = 0 

Query: 1   MAALQDSNHKPLIPLTIKLQGVILETQRNAKIQRSKHFFSSFIPPHAPNPFKSESKFRKT 60
           MAALQDSNHKPLIPLTIKLQGVILETQRNAKIQRSKHFFSSFIPPHAPNPFKSESKFRKT
Sbjct: 1   MAALQDSNHKPLIPLTIKLQGVILETQRNAKIQRSKHFFSSFIPPHAPNPFKSESKFRKT 60

Query: 61  FLLSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMG 120
           FLLSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMG
Sbjct: 61  FLLSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMG 120

Query: 121 FVGLGHDEVRK 131
           FVGLGHDEVRK
Sbjct: 121 FVGLGHDEVRK 131

[Close]
BLAST of Csor.00g064160 vs. NCBI nr
Match: XP_022137357.1 (uncharacterized protein LOC111008832 isoform X1 [Momordica charantia])

HSP 1 Score: 129 bits (323), Expect = 1.54e-33
Identity = 81/144 (56.25%), Postives = 87/144 (60.42%), Query Frame = 0 

Query: 18  KLQGVILETQRNAKIQ--------RSKHFFSS---------------------------- 77
           KLQ VIL+TQRNAKIQ         +KH  +                             
Sbjct: 137 KLQEVILKTQRNAKIQVVEDTPYGLNKHAIADKSRAFQGFDLWPPQSINFDQIIPSLATL 196

Query: 78  --FIPPHAPNPFKSESKFRKTFLLSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHK 123
             F+PP      K E+K  + FL  TF  HLGEMDAVDSVVDPLREFAKDSVRLVKRCHK
Sbjct: 197 KVFLPPQGHTSSKPETKLSR-FL--TFSSHLGEMDAVDSVVDPLREFAKDSVRLVKRCHK 256

[Close]
BLAST of Csor.00g064160 vs. NCBI nr
Match: XP_022137358.1 (uncharacterized protein LOC111008832 isoform X2 [Momordica charantia])

HSP 1 Score: 126 bits (316), Expect = 1.59e-32
Identity = 79/143 (55.24%), Postives = 86/143 (60.14%), Query Frame = 0 

Query: 19  LQGVILETQRNAKIQ--------RSKHFFSS----------------------------- 78
           +Q VIL+TQRNAKIQ         +KH  +                              
Sbjct: 135 IQEVILKTQRNAKIQVVEDTPYGLNKHAIADKSRAFQGFDLWPPQSINFDQIIPSLATLK 194

Query: 79  -FIPPHAPNPFKSESKFRKTFLLSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKP 123
            F+PP      K E+K  + FL  TF  HLGEMDAVDSVVDPLREFAKDSVRLVKRCHKP
Sbjct: 195 VFLPPQGHTSSKPETKLSR-FL--TFSSHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKP 254

[Close]
BLAST of Csor.00g064160 vs. NCBI nr
Match: KAG6573134.1 (Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 107 bits (267), Expect = 9.59e-28
Identity = 53/59 (89.83%), Postives = 56/59 (94.92%), Query Frame = 0 

Query: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVGLGHDEVRK 131
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGF+   +DEVR+
Sbjct: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFIR-SYDEVRR 58

[Close]
BLAST of Csor.00g064160 vs. NCBI nr
Match: XP_008439824.1 (PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo] >XP_011652190.1 protein transport protein Sec61 subunit gamma [Cucumis sativus] >XP_022924215.1 protein transport protein Sec61 subunit gamma isoform X1 [Cucurbita moschata] >XP_022955226.1 protein transport protein Sec61 subunit gamma [Cucurbita moschata] >XP_022994502.1 protein transport protein Sec61 subunit gamma [Cucurbita maxima] >XP_023000906.1 protein transport protein Sec61 subunit gamma isoform X2 [Cucurbita maxima] >XP_023519526.1 protein transport protein Sec61 subunit gamma [Cucurbita pepo subsp. pepo] >XP_023542809.1 protein transport protein Sec61 subunit gamma [Cucurbita pepo subsp. pepo] >XP_038893830.1 protein transport protein Sec61 subunit gamma [Benincasa hispida] >KAA0055337.1 protein transport protein Sec61 subunit gamma [Cucumis melo var. makuwa] >KAG7012319.1 Protein transport protein Sec61 subunit gamma [Cucurbita argyrosperma subsp. argyrosperma] >KAE8652628.1 hypothetical protein Csa_013813 [Cucumis sativus] >TYJ99263.1 protein transport protein Sec61 subunit gamma [Cucumis melo var. makuwa])

HSP 1 Score: 104 bits (259), Expect = 1.71e-26
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 123
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG
Sbjct: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 51

[Close]
BLAST of Csor.00g064160 vs. ExPASy TrEMBL
Match: A0A6J1C817 (uncharacterized protein LOC111008832 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111008832 PE=3 SV=1)

HSP 1 Score: 129 bits (323), Expect = 7.45e-34
Identity = 81/144 (56.25%), Postives = 87/144 (60.42%), Query Frame = 0 

Query: 18  KLQGVILETQRNAKIQ--------RSKHFFSS---------------------------- 77
           KLQ VIL+TQRNAKIQ         +KH  +                             
Sbjct: 137 KLQEVILKTQRNAKIQVVEDTPYGLNKHAIADKSRAFQGFDLWPPQSINFDQIIPSLATL 196

Query: 78  --FIPPHAPNPFKSESKFRKTFLLSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHK 123
             F+PP      K E+K  + FL  TF  HLGEMDAVDSVVDPLREFAKDSVRLVKRCHK
Sbjct: 197 KVFLPPQGHTSSKPETKLSR-FL--TFSSHLGEMDAVDSVVDPLREFAKDSVRLVKRCHK 256

[Close]
BLAST of Csor.00g064160 vs. ExPASy TrEMBL
Match: A0A6J1CA50 (uncharacterized protein LOC111008832 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111008832 PE=3 SV=1)

HSP 1 Score: 126 bits (316), Expect = 7.69e-33
Identity = 79/143 (55.24%), Postives = 86/143 (60.14%), Query Frame = 0 

Query: 19  LQGVILETQRNAKIQ--------RSKHFFSS----------------------------- 78
           +Q VIL+TQRNAKIQ         +KH  +                              
Sbjct: 135 IQEVILKTQRNAKIQVVEDTPYGLNKHAIADKSRAFQGFDLWPPQSINFDQIIPSLATLK 194

Query: 79  -FIPPHAPNPFKSESKFRKTFLLSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKP 123
            F+PP      K E+K  + FL  TF  HLGEMDAVDSVVDPLREFAKDSVRLVKRCHKP
Sbjct: 195 VFLPPQGHTSSKPETKLSR-FL--TFSSHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKP 254

[Close]
BLAST of Csor.00g064160 vs. ExPASy TrEMBL
Match: A0A453NIA0 (Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 SV=1)

HSP 1 Score: 105 bits (262), Expect = 6.36e-27
Identity = 53/61 (86.89%), Postives = 54/61 (88.52%), Query Frame = 0 

Query: 63  LSTFPLHLGEMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFV 122
           LS  P     MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVA+RTAIGFVVMGFV
Sbjct: 19  LSLRPAPQPAMDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAIRTAIGFVVMGFV 78

[Close]
BLAST of Csor.00g064160 vs. ExPASy TrEMBL
Match: A0A6J1JW08 (protein transport protein Sec61 subunit gamma OS=Cucurbita maxima OX=3661 GN=LOC111490205 PE=3 SV=1)

HSP 1 Score: 104 bits (259), Expect = 8.28e-27
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 123
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG
Sbjct: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 51

[Close]
BLAST of Csor.00g064160 vs. ExPASy TrEMBL
Match: A0A3S3PYH4 (Protein transport protein Sec61 subunit gamma OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00432500 PE=3 SV=1)

HSP 1 Score: 104 bits (259), Expect = 8.28e-27
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 123
           MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG
Sbjct: 1   MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 51

[Close]
BLAST of Csor.00g064160 vs. TAIR 10
Match: AT4G24920.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-22
Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 124
           MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG
Sbjct: 1   MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 51

[Close]
BLAST of Csor.00g064160 vs. TAIR 10
Match: AT5G50460.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 102.8 bits (255), Expect = 2.1e-22
Identity = 48/51 (94.12%), Postives = 51/51 (100.00%), Query Frame = 0 

Query: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 124
           MDA+DSVVDPLR+FAKDS+RLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG
Sbjct: 1   MDAIDSVVDPLRDFAKDSIRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 51

[Close]
BLAST of Csor.00g064160 vs. TAIR 10
Match: AT3G48570.1 (secE/sec61-gamma protein transport protein )

HSP 1 Score: 95.9 bits (237), Expect = 2.6e-20
Identity = 44/51 (86.27%), Postives = 49/51 (96.08%), Query Frame = 0 

Query: 73  MDAVDSVVDPLREFAKDSVRLVKRCHKPDRKEFTKVAVRTAIGFVVMGFVG 124
           M+A+DS +DPLR+FAK SVRLV+RCHKPDRKEFTKVAVRTAIGFVVMGFVG
Sbjct: 1   MEAIDSAIDPLRDFAKSSVRLVQRCHKPDRKEFTKVAVRTAIGFVVMGFVG 51

The following BLAST results are available for this feature:
BLAST of Csor.00g064160 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
P383852.3e-2198.04Protein transport protein Sec61 subunit gamma OS=Oryza sativa subsp. japonica OX... [more]
P0DI743.0e-2194.12Protein transport protein Sec61 subunit gamma-1 OS=Arabidopsis thaliana OX=3702 ... [more]
P0DI753.0e-2194.12Protein transport protein Sec61 subunit gamma-2 OS=Arabidopsis thaliana OX=3702 ... [more]
Q9SMP23.6e-1986.27Protein transport protein Sec61 subunit gamma-3 OS=Arabidopsis thaliana OX=3702 ... [more]
Q7Z1B86.0e-1468.63Protein transport protein Sec61 subunit gamma OS=Gryllotalpa orientalis OX=21349... [more]
BLAST of Csor.00g064160 vs. NCBI nr
Match NameE-valueIdentityDescription
KAG6584155.18.20e-90100.00Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma s... [more]
XP_022137357.11.54e-3356.25uncharacterized protein LOC111008832 isoform X1 [Momordica charantia][more]
XP_022137358.11.59e-3255.24uncharacterized protein LOC111008832 isoform X2 [Momordica charantia][more]
KAG6573134.19.59e-2889.83Protein transport protein Sec61 subunit gamma, partial [Cucurbita argyrosperma s... [more]
XP_008439824.11.71e-26100.00PREDICTED: protein transport protein Sec61 subunit gamma [Cucumis melo] >XP_0116... [more]
BLAST of Csor.00g064160 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A6J1C8177.45e-3456.25uncharacterized protein LOC111008832 isoform X1 OS=Momordica charantia OX=3673 G... [more]
A0A6J1CA507.69e-3355.24uncharacterized protein LOC111008832 isoform X2 OS=Momordica charantia OX=3673 G... [more]
A0A453NIA06.36e-2786.89Uncharacterized protein OS=Aegilops tauschii subsp. strangulata OX=200361 PE=3 S... [more]
A0A6J1JW088.28e-27100.00protein transport protein Sec61 subunit gamma OS=Cucurbita maxima OX=3661 GN=LOC... [more]
A0A3S3PYH48.28e-27100.00Protein transport protein Sec61 subunit gamma OS=Cinnamomum micranthum f. kanehi... [more]
BLAST of Csor.00g064160 vs. TAIR 10
Match NameE-valueIdentityDescription
AT4G24920.12.1e-2294.12secE/sec61-gamma protein transport protein [more]
AT5G50460.12.1e-2294.12secE/sec61-gamma protein transport protein [more]
AT3G48570.12.6e-2086.27secE/sec61-gamma protein transport protein [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023391Protein translocase SecE domain superfamilyGENE3D1.20.5.820Preprotein translocase SecE subunitcoord: 79..125
e-value: 1.3E-18
score: 68.4
IPR023391Protein translocase SecE domain superfamilySUPERFAMILY103456Preprotein translocase SecE subunitcoord: 77..124
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPFAMPF00584SecEcoord: 85..127
e-value: 1.2E-9
score: 37.9
IPR001901Protein translocase complex, SecE/Sec61-gamma subunitPROSITEPS01067SECE_SEC61Gcoord: 86..114
IPR008158Protein translocase SEC61 complex, gamma subunitTIGRFAMTIGR00327TIGR00327coord: 80..123
e-value: 3.5E-11
score: 40.7
NoneNo IPR availablePANTHERPTHR12309SEC61 GAMMA SUBUNITcoord: 45..123
NoneNo IPR availablePANTHERPTHR12309:SF24PROTEIN TRANSPORT PROTEIN SEC61 SUBUNIT GAMMA-3coord: 45..123

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g064160.m01Csor.00g064160.m01mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0031204 posttranslational protein targeting to membrane, translocation
biological_process GO:0006886 intracellular protein transport
biological_process GO:0006605 protein targeting
biological_process GO:0015031 protein transport
cellular_component GO:0016021 integral component of membrane
cellular_component GO:0071261 Ssh1 translocon complex
cellular_component GO:0016020 membrane
molecular_function GO:0008320 protein transmembrane transporter activity