Csor.00g063960 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTCTAAAGTGGAAGAAACGCTGAGAATGAAGCACCAGCAAGTTCAGCCGCCGCAAGCGGCGGAGGCGGCGGCGACGGCGAAGCAAATCCAGTGCAATAAAGCTAAGTATCCGAAGTTCAAGAGAAGTTGCTCTAATGTCGAAGAAGACGGCGCCTCTTCCGCTATGCTTTTGCTTGCTTGCATTGCTTTTGCTCCCGATTTTAGCCCCGTCCTCGGCTGA ATGGTGTCTAAAGTGGAAGAAACGCTGAGAATGAAGCACCAGCAAGTTCAGCCGCCGCAAGCGGCGGAGGCGGCGGCGACGGCGAAGCAAATCCAGTGCAATAAAGCTAAGTATCCGAAGTTCAAGAGAAGTTGCTCTAATGTCGAAGAAGACGGCGCCTCTTCCGCTATGCTTTTGCTTGCTTGCATTGCTTTTGCTCCCGATTTTAGCCCCGTCCTCGGCTGA ATGGTGTCTAAAGTGGAAGAAACGCTGAGAATGAAGCACCAGCAAGTTCAGCCGCCGCAAGCGGCGGAGGCGGCGGCGACGGCGAAGCAAATCCAGTGCAATAAAGCTAAGTATCCGAAGTTCAAGAGAAGTTGCTCTAATGTCGAAGAAGACGGCGCCTCTTCCGCTATGCTTTTGCTTGCTTGCATTGCTTTTGCTCCCGATTTTAGCCCCGTCCTCGGCTGA MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLLACIAFAPDFSPVLG Homology
BLAST of Csor.00g063960 vs. NCBI nr
Match: KAG6584135.1 (hypothetical protein SDJN03_20067, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019725.1 hypothetical protein SDJN02_18688, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 144 bits (362), Expect = 4.22e-43 Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0
BLAST of Csor.00g063960 vs. NCBI nr
Match: KGN64384.1 (hypothetical protein Csa_013100 [Cucumis sativus]) HSP 1 Score: 107 bits (266), Expect = 1.73e-28 Identity = 60/70 (85.71%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of Csor.00g063960 vs. NCBI nr
Match: KAG7012298.1 (hypothetical protein SDJN02_25050, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 97.1 bits (240), Expect = 1.69e-24 Identity = 56/74 (75.68%), Postives = 60/74 (81.08%), Query Frame = 0
BLAST of Csor.00g063960 vs. NCBI nr
Match: KAG2676094.1 (hypothetical protein I3760_12G035800 [Carya illinoinensis] >KAG6633270.1 hypothetical protein CIPAW_12G036300 [Carya illinoinensis] >KAG6683880.1 hypothetical protein I3842_12G034800 [Carya illinoinensis] >KAG7951991.1 hypothetical protein I3843_12G035700 [Carya illinoinensis]) HSP 1 Score: 76.6 bits (187), Expect = 1.77e-16 Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0
BLAST of Csor.00g063960 vs. NCBI nr
Match: KAG5039642.1 (hypothetical protein JHK85_012118 [Glycine max] >KHN34392.1 hypothetical protein glysoja_016720 [Glycine soja] >KAG5056791.1 hypothetical protein JHK86_011787 [Glycine max] >KAG5153823.1 hypothetical protein JHK82_011792 [Glycine max] >KRH57195.1 hypothetical protein GLYMA_05G045400v4 [Glycine max]) HSP 1 Score: 75.9 bits (185), Expect = 3.67e-16 Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Csor.00g063960 vs. ExPASy TrEMBL
Match: A0A0A0LTS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050230 PE=4 SV=1) HSP 1 Score: 107 bits (266), Expect = 8.38e-29 Identity = 60/70 (85.71%), Postives = 61/70 (87.14%), Query Frame = 0
BLAST of Csor.00g063960 vs. ExPASy TrEMBL
Match: I1K083 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G045400 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.78e-16 Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Csor.00g063960 vs. ExPASy TrEMBL
Match: A0A445KJ74 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_011276 PE=4 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 1.78e-16 Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0
BLAST of Csor.00g063960 vs. ExPASy TrEMBL
Match: A0A7J0FYN8 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_16g0004460 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.15e-16 Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0
BLAST of Csor.00g063960 vs. ExPASy TrEMBL
Match: A0A6P5RZ44 (uncharacterized N-acetyltransferase DDB_G0290199 OS=Prunus avium OX=42229 GN=LOC110752158 PE=4 SV=1) HSP 1 Score: 75.1 bits (183), Expect = 3.67e-16 Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 0
BLAST of Csor.00g063960 vs. TAIR 10
Match: AT5G50335.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 42.4 bits (98), Expect = 1.9e-04 Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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