Csor.00g063960 (gene) Silver-seed gourd (wild; sororia) v1

Overview
NameCsor.00g063960
Typegene
OrganismCucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
DescriptionUnknown protein
LocationCsor_Chr13: 9333545 .. 9333769 (-)
RNA-Seq ExpressionCsor.00g063960
SyntenyCsor.00g063960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGTGTCTAAAGTGGAAGAAACGCTGAGAATGAAGCACCAGCAAGTTCAGCCGCCGCAAGCGGCGGAGGCGGCGGCGACGGCGAAGCAAATCCAGTGCAATAAAGCTAAGTATCCGAAGTTCAAGAGAAGTTGCTCTAATGTCGAAGAAGACGGCGCCTCTTCCGCTATGCTTTTGCTTGCTTGCATTGCTTTTGCTCCCGATTTTAGCCCCGTCCTCGGCTGA

mRNA sequence

ATGGTGTCTAAAGTGGAAGAAACGCTGAGAATGAAGCACCAGCAAGTTCAGCCGCCGCAAGCGGCGGAGGCGGCGGCGACGGCGAAGCAAATCCAGTGCAATAAAGCTAAGTATCCGAAGTTCAAGAGAAGTTGCTCTAATGTCGAAGAAGACGGCGCCTCTTCCGCTATGCTTTTGCTTGCTTGCATTGCTTTTGCTCCCGATTTTAGCCCCGTCCTCGGCTGA

Coding sequence (CDS)

ATGGTGTCTAAAGTGGAAGAAACGCTGAGAATGAAGCACCAGCAAGTTCAGCCGCCGCAAGCGGCGGAGGCGGCGGCGACGGCGAAGCAAATCCAGTGCAATAAAGCTAAGTATCCGAAGTTCAAGAGAAGTTGCTCTAATGTCGAAGAAGACGGCGCCTCTTCCGCTATGCTTTTGCTTGCTTGCATTGCTTTTGCTCCCGATTTTAGCCCCGTCCTCGGCTGA

Protein sequence

MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLLACIAFAPDFSPVLG
Homology
BLAST of Csor.00g063960 vs. NCBI nr
Match: KAG6584135.1 (hypothetical protein SDJN03_20067, partial [Cucurbita argyrosperma subsp. sororia] >KAG7019725.1 hypothetical protein SDJN02_18688, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 144 bits (362), Expect = 4.22e-43
Identity = 74/74 (100.00%), Postives = 74/74 (100.00%), Query Frame = 0

Query: 1  MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLL 60
          MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLL
Sbjct: 1  MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLL 60

Query: 61 ACIAFAPDFSPVLG 74
          ACIAFAPDFSPVLG
Sbjct: 61 ACIAFAPDFSPVLG 74

BLAST of Csor.00g063960 vs. NCBI nr
Match: KGN64384.1 (hypothetical protein Csa_013100 [Cucumis sativus])

HSP 1 Score: 107 bits (266), Expect = 1.73e-28
Identity = 60/70 (85.71%), Postives = 61/70 (87.14%), Query Frame = 0

Query: 1  MVSKVEETLRMKHQQVQPPQAA----EAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSA 60
          MVSKVEETLR K+QQV PPQ A     AAATAKQIQCNKAKYPKFKRS SNVEEDGASSA
Sbjct: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60

Query: 61 MLLLACIAFA 66
          MLLLACIAFA
Sbjct: 61 MLLLACIAFA 70

BLAST of Csor.00g063960 vs. NCBI nr
Match: KAG7012298.1 (hypothetical protein SDJN02_25050, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 97.1 bits (240), Expect = 1.69e-24
Identity = 56/74 (75.68%), Postives = 60/74 (81.08%), Query Frame = 0

Query: 1  MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLL 60
          MVSKVEE LR K QQVQ P AA A A AKQIQ NKAKYPKFKRS S+V +DGASSA+LLL
Sbjct: 1  MVSKVEEALRRKQQQVQTPHAA-AGAAAKQIQFNKAKYPKFKRSSSDVGDDGASSAILLL 60

Query: 61 ACIAFAPDFSPVLG 74
          ACIAF+P  SPV G
Sbjct: 61 ACIAFSPASSPVSG 73

BLAST of Csor.00g063960 vs. NCBI nr
Match: KAG2676094.1 (hypothetical protein I3760_12G035800 [Carya illinoinensis] >KAG6633270.1 hypothetical protein CIPAW_12G036300 [Carya illinoinensis] >KAG6683880.1 hypothetical protein I3842_12G034800 [Carya illinoinensis] >KAG7951991.1 hypothetical protein I3843_12G035700 [Carya illinoinensis])

HSP 1 Score: 76.6 bits (187), Expect = 1.77e-16
Identity = 43/70 (61.43%), Postives = 52/70 (74.29%), Query Frame = 0

Query: 1  MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLL 60
          MVSKVEE+++ K QQ  P Q +      KQ+QCNK K  KFKRS SN+EEDGASSA+LLL
Sbjct: 1  MVSKVEESMKGKQQQ--PQQPSHQQQLQKQMQCNKGKASKFKRSSSNLEEDGASSAILLL 60

Query: 61 ACIAFAPDFS 70
          ACIA AP ++
Sbjct: 61 ACIACAPSYA 68

BLAST of Csor.00g063960 vs. NCBI nr
Match: KAG5039642.1 (hypothetical protein JHK85_012118 [Glycine max] >KHN34392.1 hypothetical protein glysoja_016720 [Glycine soja] >KAG5056791.1 hypothetical protein JHK86_011787 [Glycine max] >KAG5153823.1 hypothetical protein JHK82_011792 [Glycine max] >KRH57195.1 hypothetical protein GLYMA_05G045400v4 [Glycine max])

HSP 1 Score: 75.9 bits (185), Expect = 3.67e-16
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0

Query: 1  MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLL 60
          MVSKVEE ++ +++Q+QP    +     KQIQCNK K  KFKRS SN+EEDGASSA+L L
Sbjct: 1  MVSKVEEAMK-RNKQMQPQAQNQQQQLQKQIQCNKGKAGKFKRSSSNLEEDGASSAILFL 60

Query: 61 ACIAFAPDFS 70
          ACIA+AP ++
Sbjct: 61 ACIAYAPSYA 69

BLAST of Csor.00g063960 vs. ExPASy TrEMBL
Match: A0A0A0LTS0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050230 PE=4 SV=1)

HSP 1 Score: 107 bits (266), Expect = 8.38e-29
Identity = 60/70 (85.71%), Postives = 61/70 (87.14%), Query Frame = 0

Query: 1  MVSKVEETLRMKHQQVQPPQAA----EAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSA 60
          MVSKVEETLR K+QQV PPQ A     AAATAKQIQCNKAKYPKFKRS SNVEEDGASSA
Sbjct: 1  MVSKVEETLRRKYQQVHPPQTAVAAVAAAATAKQIQCNKAKYPKFKRSSSNVEEDGASSA 60

Query: 61 MLLLACIAFA 66
          MLLLACIAFA
Sbjct: 61 MLLLACIAFA 70

BLAST of Csor.00g063960 vs. ExPASy TrEMBL
Match: I1K083 (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G045400 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.78e-16
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0

Query: 1  MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLL 60
          MVSKVEE ++ +++Q+QP    +     KQIQCNK K  KFKRS SN+EEDGASSA+L L
Sbjct: 1  MVSKVEEAMK-RNKQMQPQAQNQQQQLQKQIQCNKGKAGKFKRSSSNLEEDGASSAILFL 60

Query: 61 ACIAFAPDFS 70
          ACIA+AP ++
Sbjct: 61 ACIAYAPSYA 69

BLAST of Csor.00g063960 vs. ExPASy TrEMBL
Match: A0A445KJ74 (Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_011276 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 1.78e-16
Identity = 41/70 (58.57%), Postives = 53/70 (75.71%), Query Frame = 0

Query: 1  MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLL 60
          MVSKVEE ++ +++Q+QP    +     KQIQCNK K  KFKRS SN+EEDGASSA+L L
Sbjct: 1  MVSKVEEAMK-RNKQMQPQAQNQQQQLQKQIQCNKGKAGKFKRSSSNLEEDGASSAILFL 60

Query: 61 ACIAFAPDFS 70
          ACIA+AP ++
Sbjct: 61 ACIAYAPSYA 69

BLAST of Csor.00g063960 vs. ExPASy TrEMBL
Match: A0A7J0FYN8 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_16g0004460 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.15e-16
Identity = 43/68 (63.24%), Postives = 50/68 (73.53%), Query Frame = 0

Query: 1  MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLL 60
          MVSKVEE ++ + QQ Q  Q        KQ+QCNK K  KFKRS SN+EEDGASSA+LLL
Sbjct: 1  MVSKVEEAMKKRQQQEQHQQQ-------KQMQCNKGKASKFKRSSSNLEEDGASSAILLL 60

Query: 61 ACIAFAPD 68
          ACIAFAP+
Sbjct: 61 ACIAFAPN 61

BLAST of Csor.00g063960 vs. ExPASy TrEMBL
Match: A0A6P5RZ44 (uncharacterized N-acetyltransferase DDB_G0290199 OS=Prunus avium OX=42229 GN=LOC110752158 PE=4 SV=1)

HSP 1 Score: 75.1 bits (183), Expect = 3.67e-16
Identity = 41/69 (59.42%), Postives = 49/69 (71.01%), Query Frame = 0

Query: 1  MVSKVEETLRMKHQQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAMLLL 60
          MVSKVEE ++ + QQ +  Q        KQIQCNK+K  KFKRS SNVEEDGAS+A+LLL
Sbjct: 1  MVSKVEEAMKRRQQQQEQKQQYHHQQQQKQIQCNKSKVCKFKRSTSNVEEDGASTAILLL 60

Query: 61 ACIAFAPDF 69
          ACI  AP +
Sbjct: 61 ACIVCAPSY 69

BLAST of Csor.00g063960 vs. TAIR 10
Match: AT5G50335.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 42.4 bits (98), Expect = 1.9e-04
Identity = 26/66 (39.39%), Postives = 38/66 (57.58%), Query Frame = 0

Query: 1  MVSKVEETLRMKH--QQVQPPQAAEAAATAKQIQCNKAKYPKFKRSCSNVEEDGASSAML 60
          MV + EE ++ +   ++ +     +         CNK K  +FKRS SN++ DGASSA+ 
Sbjct: 1  MVCRAEEAMKQRGIIKRCKEDDRHQKKKMQSITNCNKEKSCRFKRSTSNLDNDGASSAIF 60

Query: 61 LLACIA 65
          LLACIA
Sbjct: 61 LLACIA 66

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
KAG6584135.14.22e-43100.00hypothetical protein SDJN03_20067, partial [Cucurbita argyrosperma subsp. sorori... [more]
KGN64384.11.73e-2885.71hypothetical protein Csa_013100 [Cucumis sativus][more]
KAG7012298.11.69e-2475.68hypothetical protein SDJN02_25050, partial [Cucurbita argyrosperma subsp. argyro... [more]
KAG2676094.11.77e-1661.43hypothetical protein I3760_12G035800 [Carya illinoinensis] >KAG6633270.1 hypothe... [more]
KAG5039642.13.67e-1658.57hypothetical protein JHK85_012118 [Glycine max] >KHN34392.1 hypothetical protein... [more]
Match NameE-valueIdentityDescription
A0A0A0LTS08.38e-2985.71Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G050230 PE=4 SV=1[more]
I1K0831.78e-1658.57Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_05G045400 PE=4 SV=1[more]
A0A445KJ741.78e-1658.57Uncharacterized protein OS=Glycine soja OX=3848 GN=D0Y65_011276 PE=4 SV=1[more]
A0A7J0FYN83.15e-1663.24Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_16g0004460 PE=4 SV=1[more]
A0A6P5RZ443.67e-1659.42uncharacterized N-acetyltransferase DDB_G0290199 OS=Prunus avium OX=42229 GN=LOC... [more]
Match NameE-valueIdentityDescription
AT5G50335.11.9e-0439.39unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae -... [more]
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR38398EXPRESSED PROTEINcoord: 1..67

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Csor.00g063960.m01Csor.00g063960.m01mRNA