Homology
BLAST of Csor.00g060820 vs. ExPASy Swiss-Prot
Match:
Q84TH4 (Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana OX=3702 GN=SR45A PE=1 SV=1)
HSP 1 Score: 154.8 bits (390), Expect = 1.2e-36
Identity = 111/223 (49.78%), Postives = 133/223 (59.64%), Query Frame = 0
Query: 17 RAPSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENVNNPGNTLYVTGLSTRVT 76
R+P RSR P R RS SR SRS +R + NPGN+LYVTGLS RVT
Sbjct: 28 RSPMSYSRRSRYSPSLSPYDKRRGRSVSRSLSRSPTRSVSSDAENPGNSLYVTGLSHRVT 87
Query: 77 ERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYIT 136
ERDLE+HF+KEGKV+ LV++P TR SRGF F++M +V DANRC++ L+ S+L+GR IT
Sbjct: 88 ERDLEDHFAKEGKVTDVHLVLDPWTRESRGFGFISMKSVGDANRCIRSLDHSVLQGRVIT 147
Query: 137 VEKSRRKRPRTPTPGHYLGLKSTRD---------------SGYRGERGSRYRGGSFREDY 196
VEK+RR+R RTPTPG YLGL++ R S R S RG S+ Y
Sbjct: 148 VEKARRRRGRTPTPGKYLGLRTARGRHKSPSYSPRRSVSCSRSRSRSYSSDRGRSYSPSY 207
Query: 197 GHR-RSPRRSP-YRGAREYSPRHSPPPYGGGRSRRDHSRSPPY 223
G R RS SP YR R YSP SP P RRD S SP Y
Sbjct: 208 GRRGRSSSYSPFYRRRRFYSPSRSPSPDDRYNRRRDRSYSPYY 250
BLAST of Csor.00g060820 vs. ExPASy Swiss-Prot
Match:
Q3ZBT6 (Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN=TRA2B PE=2 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 102/245 (41.63%), Postives = 121/245 (49.39%), Query Frame = 0
Query: 3 DSHRKR-YSRSPSPWRAPS---------RSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRS 62
DS R R SRS S R+ S RSRSRSRS RSRSRS+SR R S S
Sbjct: 42 DSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPM 101
Query: 63 RGRGENVNN-----PGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGF 122
R +V N P L V GLS TERDL E FSK G ++ +V + ++R SRGF
Sbjct: 102 STRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGF 161
Query: 123 AFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGE 182
AFV +NVDDA + N L+GR I V+ S KRP TPTPG Y+G + S R
Sbjct: 162 AFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDY 221
Query: 183 RGSRYRGGSFREDYGHRRSPR-----RSPYRGAREYSP---RHSPPPYGGGRSRRDHSRS 225
Y G DY + RS R +R A++ R SP PY R SRS
Sbjct: 222 YDRGYDRGYDDRDY-YSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRS 281
BLAST of Csor.00g060820 vs. ExPASy Swiss-Prot
Match:
P62995 (Transformer-2 protein homolog beta OS=Homo sapiens OX=9606 GN=TRA2B PE=1 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 102/245 (41.63%), Postives = 121/245 (49.39%), Query Frame = 0
Query: 3 DSHRKR-YSRSPSPWRAPS---------RSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRS 62
DS R R SRS S R+ S RSRSRSRS RSRSRS+SR R S S
Sbjct: 42 DSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPM 101
Query: 63 RGRGENVNN-----PGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGF 122
R +V N P L V GLS TERDL E FSK G ++ +V + ++R SRGF
Sbjct: 102 STRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGF 161
Query: 123 AFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGE 182
AFV +NVDDA + N L+GR I V+ S KRP TPTPG Y+G + S R
Sbjct: 162 AFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDY 221
Query: 183 RGSRYRGGSFREDYGHRRSPR-----RSPYRGAREYSP---RHSPPPYGGGRSRRDHSRS 225
Y G DY + RS R +R A++ R SP PY R SRS
Sbjct: 222 YDRGYDRGYDDRDY-YSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRS 281
BLAST of Csor.00g060820 vs. ExPASy Swiss-Prot
Match:
P62996 (Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 102/245 (41.63%), Postives = 121/245 (49.39%), Query Frame = 0
Query: 3 DSHRKR-YSRSPSPWRAPS---------RSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRS 62
DS R R SRS S R+ S RSRSRSRS RSRSRS+SR R S S
Sbjct: 42 DSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPM 101
Query: 63 RGRGENVNN-----PGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGF 122
R +V N P L V GLS TERDL E FSK G ++ +V + ++R SRGF
Sbjct: 102 STRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGF 161
Query: 123 AFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGE 182
AFV +NVDDA + N L+GR I V+ S KRP TPTPG Y+G + S R
Sbjct: 162 AFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDY 221
Query: 183 RGSRYRGGSFREDYGHRRSPR-----RSPYRGAREYSP---RHSPPPYGGGRSRRDHSRS 225
Y G DY + RS R +R A++ R SP PY R SRS
Sbjct: 222 YDRGYDRGYDDRDY-YSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRS 281
BLAST of Csor.00g060820 vs. ExPASy Swiss-Prot
Match:
P62997 (Transformer-2 protein homolog beta OS=Rattus norvegicus OX=10116 GN=Tra2b PE=1 SV=1)
HSP 1 Score: 93.6 bits (231), Expect = 3.3e-18
Identity = 102/245 (41.63%), Postives = 121/245 (49.39%), Query Frame = 0
Query: 3 DSHRKR-YSRSPSPWRAPS---------RSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRS 62
DS R R SRS S R+ S RSRSRSRS RSRSRS+SR R S S
Sbjct: 42 DSRRSRSKSRSRSESRSRSRRSSRRHYTRSRSRSRSHRRSRSRSYSRDYRRRHSHSHSPM 101
Query: 63 RGRGENVNN-----PGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGF 122
R +V N P L V GLS TERDL E FSK G ++ +V + ++R SRGF
Sbjct: 102 STRRRHVGNRANPDPNCCLGVFGLSLYTTERDLREVFSKYGPIADVSIVYDQQSRRSRGF 161
Query: 123 AFVTMDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGE 182
AFV +NVDDA + N L+GR I V+ S KRP TPTPG Y+G + S R
Sbjct: 162 AFVYFENVDDAKEAKERANGMELDGRRIRVDFSITKRPHTPTPGIYMGRPTYGSSRRRDY 221
Query: 183 RGSRYRGGSFREDYGHRRSPR-----RSPYRGAREYSP---RHSPPPYGGGRSRRDHSRS 225
Y G DY + RS R +R A++ R SP PY R SRS
Sbjct: 222 YDRGYDRGYDDRDY-YSRSYRGGGGGGGGWRAAQDRDQIYRRRSPSPYYSRGGYRSRSRS 281
BLAST of Csor.00g060820 vs. NCBI nr
Match:
XP_022950652.1 (serine/arginine-rich splicing factor SR45a [Cucurbita moschata] >XP_022978005.1 serine/arginine-rich splicing factor SR45a [Cucurbita maxima] >XP_023543883.1 serine/arginine-rich splicing factor SR45a [Cucurbita pepo subsp. pepo] >KAG6603882.1 Serine/arginine-rich splicing factor SR45a, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 458 bits (1178), Expect = 3.48e-162
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
Query: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENVN 60
MADSHRKRYSRSPSPWRAPSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENVN
Sbjct: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENVN 60
Query: 61 NPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDANR 120
NPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDANR
Sbjct: 61 NPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDANR 120
Query: 121 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGGSFRED 180
CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGGSFRED
Sbjct: 121 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGGSFRED 180
Query: 181 YGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPDRRYPRGSR 239
YGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPDRRYPRGSR
Sbjct: 181 YGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPDRRYPRGSR 239
BLAST of Csor.00g060820 vs. NCBI nr
Match:
XP_016899368.1 (PREDICTED: serine/arginine-rich splicing factor SR45a [Cucumis melo])
HSP 1 Score: 407 bits (1046), Expect = 4.90e-142
Identity = 225/243 (92.59%), Postives = 232/243 (95.47%), Query Frame = 0
Query: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSR--PRSRSRSWSRPRSRSRGRSRSRSRGRGEN 60
MAD HRKRYSRSPSPWRAPSRSRSRSRSR PRSRSRSWSRPRS SRGRSRSRSRGR ++
Sbjct: 1 MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-DH 60
Query: 61 VNNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDA 120
NNPGNTLYVTGLSTRVTERDLE+HFSKEGKV+SCFLVVEPRTRISRGFAFVTMDNVDDA
Sbjct: 61 ANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDA 120
Query: 121 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGG-SF 180
NRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG+RGSRYRGG SF
Sbjct: 121 NRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSF 180
Query: 181 REDYGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPP-YSPYGGGSPDRRYPR 239
REDYG+RRSPRRSPYRGAREYSPRHSPP YGGGRSRRDHSRSPP YSP GGSPDRRYPR
Sbjct: 181 REDYGYRRSPRRSPYRGAREYSPRHSPP-YGGGRSRRDHSRSPPPYSPPYGGSPDRRYPR 240
BLAST of Csor.00g060820 vs. NCBI nr
Match:
XP_031743118.1 (serine/arginine-rich splicing factor SR45a [Cucumis sativus])
HSP 1 Score: 399 bits (1025), Expect = 8.64e-139
Identity = 227/246 (92.28%), Postives = 232/246 (94.31%), Query Frame = 0
Query: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSR--PRSRSRSWSRPRSRSRGRSRSRSRGRGEN 60
MAD HRKRYSRSPSPW+APSRSRSRSRSR PRSRSRSWSRPRS SRGRSRSRSRGR E+
Sbjct: 1 MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EH 60
Query: 61 VNNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDA 120
NNPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVEPRTRISRGFAFVTMDNVDDA
Sbjct: 61 ANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDA 120
Query: 121 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG-ERGS-RYRGG- 180
NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG +RGS RYRGG
Sbjct: 121 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGG 180
Query: 181 -SFREDYGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPP-YSPYGGGSPDRR 239
SFREDYG+RRSPRRSPYRGAREYSPRHSPP YGGGRSRRDHSRSPP YSP GGSPDRR
Sbjct: 181 GSFREDYGYRRSPRRSPYRGAREYSPRHSPP-YGGGRSRRDHSRSPPPYSPPYGGSPDRR 240
BLAST of Csor.00g060820 vs. NCBI nr
Match:
XP_038881911.1 (serine/arginine-rich splicing factor SR45a [Benincasa hispida])
HSP 1 Score: 395 bits (1016), Expect = 1.82e-137
Identity = 221/244 (90.57%), Postives = 230/244 (94.26%), Query Frame = 0
Query: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSR--PRSRSRSWSRPRSRSRGRSRSRSRGRGEN 60
MADSHRKRYSRSPSPWRAPSRSRSRSRSR PRSRSRSWSRPRS SRGRSRSRSRGR ++
Sbjct: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-DH 60
Query: 61 VNNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDA 120
+NPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVEPRTRISRGFAFVTMDNVDDA
Sbjct: 61 AHNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDA 120
Query: 121 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGG-SF 180
NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRD+GYRG+RGSRYRGG SF
Sbjct: 121 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDAGYRGDRGSRYRGGGSF 180
Query: 181 REDYGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSP--YGGGSPDRRYP 239
R+DYG+RRSPRRSPYRGAREYSP PPYGG RSRRDHSRSPPY+P YGG SPDRRYP
Sbjct: 181 RDDYGYRRSPRRSPYRGAREYSPPRHSPPYGG-RSRRDHSRSPPYTPPPYGG-SPDRRYP 240
BLAST of Csor.00g060820 vs. NCBI nr
Match:
KAE8647621.1 (hypothetical protein Csa_003197 [Cucumis sativus])
HSP 1 Score: 399 bits (1025), Expect = 5.82e-137
Identity = 227/246 (92.28%), Postives = 232/246 (94.31%), Query Frame = 0
Query: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSR--PRSRSRSWSRPRSRSRGRSRSRSRGRGEN 60
MAD HRKRYSRSPSPW+APSRSRSRSRSR PRSRSRSWSRPRS SRGRSRSRSRGR E+
Sbjct: 1 MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EH 60
Query: 61 VNNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDA 120
NNPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVEPRTRISRGFAFVTMDNVDDA
Sbjct: 61 ANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDA 120
Query: 121 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG-ERGS-RYRGG- 180
NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG +RGS RYRGG
Sbjct: 121 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGG 180
Query: 181 -SFREDYGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPP-YSPYGGGSPDRR 239
SFREDYG+RRSPRRSPYRGAREYSPRHSPP YGGGRSRRDHSRSPP YSP GGSPDRR
Sbjct: 181 GSFREDYGYRRSPRRSPYRGAREYSPRHSPP-YGGGRSRRDHSRSPPPYSPPYGGSPDRR 240
BLAST of Csor.00g060820 vs. ExPASy TrEMBL
Match:
A0A6J1INV2 (serine/arginine-rich splicing factor SR45a OS=Cucurbita maxima OX=3661 GN=LOC111478126 PE=4 SV=1)
HSP 1 Score: 458 bits (1178), Expect = 1.68e-162
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
Query: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENVN 60
MADSHRKRYSRSPSPWRAPSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENVN
Sbjct: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENVN 60
Query: 61 NPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDANR 120
NPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDANR
Sbjct: 61 NPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDANR 120
Query: 121 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGGSFRED 180
CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGGSFRED
Sbjct: 121 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGGSFRED 180
Query: 181 YGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPDRRYPRGSR 239
YGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPDRRYPRGSR
Sbjct: 181 YGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPDRRYPRGSR 239
BLAST of Csor.00g060820 vs. ExPASy TrEMBL
Match:
A0A6J1GFF0 (serine/arginine-rich splicing factor SR45a OS=Cucurbita moschata OX=3662 GN=LOC111453689 PE=4 SV=1)
HSP 1 Score: 458 bits (1178), Expect = 1.68e-162
Identity = 239/239 (100.00%), Postives = 239/239 (100.00%), Query Frame = 0
Query: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENVN 60
MADSHRKRYSRSPSPWRAPSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENVN
Sbjct: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSRPRSRSRSWSRPRSRSRGRSRSRSRGRGENVN 60
Query: 61 NPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDANR 120
NPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDANR
Sbjct: 61 NPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDANR 120
Query: 121 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGGSFRED 180
CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGGSFRED
Sbjct: 121 CVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGGSFRED 180
Query: 181 YGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPDRRYPRGSR 239
YGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPDRRYPRGSR
Sbjct: 181 YGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPDRRYPRGSR 239
BLAST of Csor.00g060820 vs. ExPASy TrEMBL
Match:
A0A1S4DTT1 (serine/arginine-rich splicing factor SR45a OS=Cucumis melo OX=3656 GN=LOC103485170 PE=4 SV=1)
HSP 1 Score: 407 bits (1046), Expect = 2.37e-142
Identity = 225/243 (92.59%), Postives = 232/243 (95.47%), Query Frame = 0
Query: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSR--PRSRSRSWSRPRSRSRGRSRSRSRGRGEN 60
MAD HRKRYSRSPSPWRAPSRSRSRSRSR PRSRSRSWSRPRS SRGRSRSRSRGR ++
Sbjct: 1 MADVHRKRYSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-DH 60
Query: 61 VNNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDA 120
NNPGNTLYVTGLSTRVTERDLE+HFSKEGKV+SCFLVVEPRTRISRGFAFVTMDNVDDA
Sbjct: 61 ANNPGNTLYVTGLSTRVTERDLEDHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDA 120
Query: 121 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGG-SF 180
NRCVKHLNQS+LEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG+RGSRYRGG SF
Sbjct: 121 NRCVKHLNQSVLEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGDRGSRYRGGGSF 180
Query: 181 REDYGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPP-YSPYGGGSPDRRYPR 239
REDYG+RRSPRRSPYRGAREYSPRHSPP YGGGRSRRDHSRSPP YSP GGSPDRRYPR
Sbjct: 181 REDYGYRRSPRRSPYRGAREYSPRHSPP-YGGGRSRRDHSRSPPPYSPPYGGSPDRRYPR 240
BLAST of Csor.00g060820 vs. ExPASy TrEMBL
Match:
A0A0A0KMM4 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507340 PE=4 SV=1)
HSP 1 Score: 399 bits (1025), Expect = 4.18e-139
Identity = 227/246 (92.28%), Postives = 232/246 (94.31%), Query Frame = 0
Query: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSR--PRSRSRSWSRPRSRSRGRSRSRSRGRGEN 60
MAD HRKRYSRSPSPW+APSRSRSRSRSR PRSRSRSWSRPRS SRGRSRSRSRGR E+
Sbjct: 1 MADVHRKRYSRSPSPWKAPSRSRSRSRSRSRPRSRSRSWSRPRSPSRGRSRSRSRGR-EH 60
Query: 61 VNNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDA 120
NNPGNTLYVTGLSTRVTERDLEEHFSKEGKV+SCFLVVEPRTRISRGFAFVTMDNVDDA
Sbjct: 61 ANNPGNTLYVTGLSTRVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVTMDNVDDA 120
Query: 121 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG-ERGS-RYRGG- 180
NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRG +RGS RYRGG
Sbjct: 121 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGGDRGSSRYRGGG 180
Query: 181 -SFREDYGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPP-YSPYGGGSPDRR 239
SFREDYG+RRSPRRSPYRGAREYSPRHSPP YGGGRSRRDHSRSPP YSP GGSPDRR
Sbjct: 181 GSFREDYGYRRSPRRSPYRGAREYSPRHSPP-YGGGRSRRDHSRSPPPYSPPYGGSPDRR 240
BLAST of Csor.00g060820 vs. ExPASy TrEMBL
Match:
A0A6J1KT61 (serine/arginine-rich splicing factor SR45a-like OS=Cucurbita maxima OX=3661 GN=LOC111497374 PE=4 SV=1)
HSP 1 Score: 384 bits (986), Expect = 2.65e-133
Identity = 215/241 (89.21%), Postives = 222/241 (92.12%), Query Frame = 0
Query: 1 MADSHRKRYSRSPSPWRAPSRSRSRSRSR--PRSRSRSWSRPRSRSRGRSRSRSRGRGEN 60
MA SHRKR+SRSPSPWRAPSRSRSRSRSR PRSRSRSWSRPRS+SRGRSRSRSRGR EN
Sbjct: 1 MAGSHRKRHSRSPSPWRAPSRSRSRSRSRSRPRSRSRSWSRPRSQSRGRSRSRSRGR-EN 60
Query: 61 VNNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMDNVDDA 120
NPGNTLYVTGLS RVTERDLEEHFSKEGKV+SCFLVVEPRTRISRGFAFV MDNVDDA
Sbjct: 61 ALNPGNTLYVTGLSARVTERDLEEHFSKEGKVASCFLVVEPRTRISRGFAFVQMDNVDDA 120
Query: 121 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYRGGSFR 180
NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLK+TRDSGYR +RG RYRGGS R
Sbjct: 121 NRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKNTRDSGYRDDRG-RYRGGSLR 180
Query: 181 EDYGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPDRRYPRGS 239
+DYG+RRSPRRSPYRG REYSPRHSP GGRSRRDHSRSPPYSPYG SPD RYPRGS
Sbjct: 181 DDYGYRRSPRRSPYRGTREYSPRHSP--LYGGRSRRDHSRSPPYSPYG--SPDSRYPRGS 235
BLAST of Csor.00g060820 vs. TAIR 10
Match:
AT4G35785.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 243.0 bits (619), Expect = 2.4e-64
Identity = 166/247 (67.21%), Postives = 185/247 (74.90%), Query Frame = 0
Query: 1 MADS-HRKRYSRSPSP----WRAPSRSRSRSRSRPRSRSRSWSRPR----SRSRGRSRSR 60
MADS R+R SRSPSP R+ SRSRSRSRSRPR RSRS S PR SRSRGRSRSR
Sbjct: 1 MADSPQRRRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRSRSR 60
Query: 61 SRGRGENVNNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVT 120
SRGR E V NPG TLYVTGLSTRVT++DLE HF+KEGKV+SCFLV+EPRTR+SRGFAFVT
Sbjct: 61 SRGRSE-VENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRVSRGFAFVT 120
Query: 121 MDNVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSR 180
M ++ DA RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKS+RDS G R SR
Sbjct: 121 MSSLKDAERCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDSDREG-RSSR 180
Query: 181 YRGGSFREDYGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPD 239
R R+DY RRSPR R+YSPR RSRRD S YSP+ G SP+
Sbjct: 181 GRHYD-RDDYRDRRSPR-------RDYSPRDE------RRSRRDRS----YSPH-GRSPE 226
BLAST of Csor.00g060820 vs. TAIR 10
Match:
AT4G35785.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 240.0 bits (611), Expect = 2.0e-63
Identity = 162/245 (66.12%), Postives = 181/245 (73.88%), Query Frame = 0
Query: 1 MADS-HRKRYSRSPSP----WRAPSRSRSRSRSRP--RSRSRSWSRPRSRSRGRSRSRSR 60
MADS R+R SRSPSP R+ SRSRSRSRSRP RSRSRS RP S SR R RSRSR
Sbjct: 1 MADSPQRRRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRSRSR 60
Query: 61 GRGENVNNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVTMD 120
RG V NPG TLYVTGLSTRVT++DLE HF+KEGKV+SCFLV+EPRTR+SRGFAFVTM
Sbjct: 61 SRGSEVENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRVSRGFAFVTMS 120
Query: 121 NVDDANRCVKHLNQSILEGRYITVEKSRRKRPRTPTPGHYLGLKSTRDSGYRGERGSRYR 180
++ DA RC+K+LNQS+LEGRYITVE+SRRKRPRTPTPGHYLGLKS+RDS G R SR R
Sbjct: 121 SLKDAERCIKYLNQSVLEGRYITVERSRRKRPRTPTPGHYLGLKSSRDSDREG-RSSRGR 180
Query: 181 GGSFREDYGHRRSPRRSPYRGAREYSPRHSPPPYGGGRSRRDHSRSPPYSPYGGGSPDRR 239
R+DY RRSPR R+YSPR RSRRD S YSP+ G SP+RR
Sbjct: 181 HYD-RDDYRDRRSPR-------RDYSPRDE------RRSRRDRS----YSPH-GRSPERR 225
BLAST of Csor.00g060820 vs. TAIR 10
Match:
AT4G35785.3 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 181.4 bits (459), Expect = 8.5e-46
Identity = 110/148 (74.32%), Postives = 124/148 (83.78%), Query Frame = 0
Query: 1 MADS-HRKRYSRSPSP----WRAPSRSRSRSRSRPRSRSRSWSRPR----SRSRGRSRSR 60
MADS R+R SRSPSP R+ SRSRSRSRSRPR RSRS S PR SRSRGRSRSR
Sbjct: 1 MADSPQRRRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRSRSR 60
Query: 61 SRGRGENVNNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVEPRTRISRGFAFVT 120
SRGR E V NPG TLYVTGLSTRVT++DLE HF+KEGKV+SCFLV+EPRTR+SRGFAFVT
Sbjct: 61 SRGRSE-VENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVMEPRTRVSRGFAFVT 120
Query: 121 MDNVDDANRCVKHLNQSILEGRYITVEK 140
M ++ DA RC+K+LNQS+LEGRYITVE+
Sbjct: 121 MSSLKDAERCIKYLNQSVLEGRYITVER 147
BLAST of Csor.00g060820 vs. TAIR 10
Match:
AT4G35785.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 172.6 bits (436), Expect = 3.9e-43
Identity = 108/161 (67.08%), Postives = 122/161 (75.78%), Query Frame = 0
Query: 1 MADS-HRKRYSRSPSP----WRAPSRSRSRSRSRPRSRSRSWSRPR----SRSRGR---- 60
MADS R+R SRSPSP R+ SRSRSRSRSRPR RSRS S PR SRSRGR
Sbjct: 1 MADSPQRRRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRILRG 60
Query: 61 ---------SRSRSRGRGENVNNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVE 120
RSRSR RG V NPG TLYVTGLSTRVT++DLE HF+KEGKV+SCFLV+E
Sbjct: 61 NLFFITCTLCRSRSRSRGSEVENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVME 120
Query: 121 PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK 140
PRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Sbjct: 121 PRTRVSRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVER 161
BLAST of Csor.00g060820 vs. TAIR 10
Match:
AT4G35785.5 (RNA-binding (RRM/RBD/RNP motifs) family protein )
HSP 1 Score: 172.6 bits (436), Expect = 3.9e-43
Identity = 108/161 (67.08%), Postives = 122/161 (75.78%), Query Frame = 0
Query: 1 MADS-HRKRYSRSPSP----WRAPSRSRSRSRSRPRSRSRSWSRPR----SRSRGR---- 60
MADS R+R SRSPSP R+ SRSRSRSRSRPR RSRS S PR SRSRGR
Sbjct: 1 MADSPQRRRDSRSPSPRKERARSRSRSRSRSRSRPRLRSRSRSLPRPVSPSRSRGRILRG 60
Query: 61 ---------SRSRSRGRGENVNNPGNTLYVTGLSTRVTERDLEEHFSKEGKVSSCFLVVE 120
RSRSR RG V NPG TLYVTGLSTRVT++DLE HF+KEGKV+SCFLV+E
Sbjct: 61 NLFFITCTLCRSRSRSRGSEVENPGTTLYVTGLSTRVTDKDLEAHFAKEGKVASCFLVME 120
Query: 121 PRTRISRGFAFVTMDNVDDANRCVKHLNQSILEGRYITVEK 140
PRTR+SRGFAFVTM ++ DA RC+K+LNQS+LEGRYITVE+
Sbjct: 121 PRTRVSRGFAFVTMSSLKDAERCIKYLNQSVLEGRYITVER 161
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Q84TH4 | 1.2e-36 | 49.78 | Serine/arginine-rich splicing factor SR45a OS=Arabidopsis thaliana OX=3702 GN=SR... | [more] |
Q3ZBT6 | 3.3e-18 | 41.63 | Transformer-2 protein homolog beta OS=Bos taurus OX=9913 GN=TRA2B PE=2 SV=1 | [more] |
P62995 | 3.3e-18 | 41.63 | Transformer-2 protein homolog beta OS=Homo sapiens OX=9606 GN=TRA2B PE=1 SV=1 | [more] |
P62996 | 3.3e-18 | 41.63 | Transformer-2 protein homolog beta OS=Mus musculus OX=10090 GN=Tra2b PE=1 SV=1 | [more] |
P62997 | 3.3e-18 | 41.63 | Transformer-2 protein homolog beta OS=Rattus norvegicus OX=10116 GN=Tra2b PE=1 S... | [more] |
Match Name | E-value | Identity | Description | |
XP_022950652.1 | 3.48e-162 | 100.00 | serine/arginine-rich splicing factor SR45a [Cucurbita moschata] >XP_022978005.1 ... | [more] |
XP_016899368.1 | 4.90e-142 | 92.59 | PREDICTED: serine/arginine-rich splicing factor SR45a [Cucumis melo] | [more] |
XP_031743118.1 | 8.64e-139 | 92.28 | serine/arginine-rich splicing factor SR45a [Cucumis sativus] | [more] |
XP_038881911.1 | 1.82e-137 | 90.57 | serine/arginine-rich splicing factor SR45a [Benincasa hispida] | [more] |
KAE8647621.1 | 5.82e-137 | 92.28 | hypothetical protein Csa_003197 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1INV2 | 1.68e-162 | 100.00 | serine/arginine-rich splicing factor SR45a OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1GFF0 | 1.68e-162 | 100.00 | serine/arginine-rich splicing factor SR45a OS=Cucurbita moschata OX=3662 GN=LOC1... | [more] |
A0A1S4DTT1 | 2.37e-142 | 92.59 | serine/arginine-rich splicing factor SR45a OS=Cucumis melo OX=3656 GN=LOC1034851... | [more] |
A0A0A0KMM4 | 4.18e-139 | 92.28 | RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G507340 PE=4 SV... | [more] |
A0A6J1KT61 | 2.65e-133 | 89.21 | serine/arginine-rich splicing factor SR45a-like OS=Cucurbita maxima OX=3661 GN=L... | [more] |
Match Name | E-value | Identity | Description | |
AT4G35785.2 | 2.4e-64 | 67.21 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G35785.1 | 2.0e-63 | 66.12 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G35785.3 | 8.5e-46 | 74.32 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G35785.4 | 3.9e-43 | 67.08 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |
AT4G35785.5 | 3.9e-43 | 67.08 | RNA-binding (RRM/RBD/RNP motifs) family protein | [more] |