Csor.00g051780 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglestart_codonpolypeptidestop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAAGAAGAAGAAGAAGAACCTGTTATTGAGCAAGTTTTTGATGGCTACCACAGTGTTGTCCTCAAGAACACCACGGTACACAATTCCATATCCGCCTTCACCAATGACATGTTCATCCGCAAAGCCATTAGTAGAACACTCAAGCTCTCTGAGAGTATACCTATGTCCCCAACCCAAATGCGAAACCACCGACAACTGCTCACCGGACCGAACTTCTCCACTACCGTGACACGAACCGCCGTCCCTCTCCGGGAACGAAACCCGGCGGTCCTTCCCAATTTCAATGCGGGTTCTACGGCGTCCATTACCTGGGCTCCCTTGTTCCGTCTGAAGCTGTTCTGCCTCCGGCAAGGACTCAGGGTCAGAATGAATGGAGCCGCGAGAATGGTCGATTCGTATTTCCTGGATTTCCTTCGAGACATTTGGGACAATGGGGTTCAAAGAGGGCTTAGATTTAGACGCCCTGTTGCGCCTGACAATGAACCACAACGAAATGAAGAACAGAACGATAACAATAGCGGCACCCACGCAAATTCCCAGAGCGACCCACAAGCGCAAACCAAAAATGGAGATCCTCCTCGAGAGCTGATCGTTCAAGAACGCATAATTAGACATTTCCCCCTTCCTCCTCCTCCTTCTTCTACAGATGATATCTGA ATGAAAGAAGAAGAAGAAGAACCTGTTATTGAGCAAGTTTTTGATGGCTACCACAGTGTTGTCCTCAAGAACACCACGGTACACAATTCCATATCCGCCTTCACCAATGACATGTTCATCCGCAAAGCCATTAGTAGAACACTCAAGCTCTCTGAGAGTATACCTATGTCCCCAACCCAAATGCGAAACCACCGACAACTGCTCACCGGACCGAACTTCTCCACTACCGTGACACGAACCGCCGTCCCTCTCCGGGAACGAAACCCGGCGGTCCTTCCCAATTTCAATGCGGGTTCTACGGCGTCCATTACCTGGGCTCCCTTGTTCCGTCTGAAGCTGTTCTGCCTCCGGCAAGGACTCAGGGTCAGAATGAATGGAGCCGCGAGAATGGTCGATTCGTATTTCCTGGATTTCCTTCGAGACATTTGGGACAATGGGGTTCAAAGAGGGCTTAGATTTAGACGCCCTGTTGCGCCTGACAATGAACCACAACGAAATGAAGAACAGAACGATAACAATAGCGGCACCCACGCAAATTCCCAGAGCGACCCACAAGCGCAAACCAAAAATGGAGATCCTCCTCGAGAGCTGATCGTTCAAGAACGCATAATTAGACATTTCCCCCTTCCTCCTCCTCCTTCTTCTACAGATGATATCTGA ATGAAAGAAGAAGAAGAAGAACCTGTTATTGAGCAAGTTTTTGATGGCTACCACAGTGTTGTCCTCAAGAACACCACGGTACACAATTCCATATCCGCCTTCACCAATGACATGTTCATCCGCAAAGCCATTAGTAGAACACTCAAGCTCTCTGAGAGTATACCTATGTCCCCAACCCAAATGCGAAACCACCGACAACTGCTCACCGGACCGAACTTCTCCACTACCGTGACACGAACCGCCGTCCCTCTCCGGGAACGAAACCCGGCGGTCCTTCCCAATTTCAATGCGGGTTCTACGGCGTCCATTACCTGGGCTCCCTTGTTCCGTCTGAAGCTGTTCTGCCTCCGGCAAGGACTCAGGGTCAGAATGAATGGAGCCGCGAGAATGGTCGATTCGTATTTCCTGGATTTCCTTCGAGACATTTGGGACAATGGGGTTCAAAGAGGGCTTAGATTTAGACGCCCTGTTGCGCCTGACAATGAACCACAACGAAATGAAGAACAGAACGATAACAATAGCGGCACCCACGCAAATTCCCAGAGCGACCCACAAGCGCAAACCAAAAATGGAGATCCTCCTCGAGAGCTGATCGTTCAAGAACGCATAATTAGACATTTCCCCCTTCCTCCTCCTCCTTCTTCTACAGATGATATCTGA MKEEEEEPVIEQVFDGYHSVVLKNTTVHNSISAFTNDMFIRKAISRTLKLSESIPMSPTQMRNHRQLLTGPNFSTTVTRTAVPLRERNPAVLPNFNAGSTASITWAPLFRLKLFCLRQGLRVRMNGAARMVDSYFLDFLRDIWDNGVQRGLRFRRPVAPDNEPQRNEEQNDNNSGTHANSQSDPQAQTKNGDPPRELIVQERIIRHFPLPPPPSSTDDI Homology
BLAST of Csor.00g051780 vs. NCBI nr
Match: KAG6585674.1 (hypothetical protein SDJN03_18407, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 441 bits (1135), Expect = 2.69e-156 Identity = 219/219 (100.00%), Postives = 219/219 (100.00%), Query Frame = 0
BLAST of Csor.00g051780 vs. NCBI nr
Match: GER29944.1 (arginine decarboxylase 2 [Striga asiatica]) HSP 1 Score: 76.6 bits (187), Expect = 4.62e-13 Identity = 61/173 (35.26%), Postives = 84/173 (48.55%), Query Frame = 0
BLAST of Csor.00g051780 vs. NCBI nr
Match: RXH72226.1 (hypothetical protein DVH24_033764 [Malus domestica]) HSP 1 Score: 64.7 bits (156), Expect = 3.95e-09 Identity = 50/142 (35.21%), Postives = 79/142 (55.63%), Query Frame = 0
BLAST of Csor.00g051780 vs. ExPASy TrEMBL
Match: A0A2P2LKI0 (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 85.1 bits (209), Expect = 1.34e-16 Identity = 57/157 (36.31%), Postives = 80/157 (50.96%), Query Frame = 0
BLAST of Csor.00g051780 vs. ExPASy TrEMBL
Match: A0A5A7PBF8 (Arginine decarboxylase 2 OS=Striga asiatica OX=4170 GN=STAS_05843 PE=4 SV=1) HSP 1 Score: 76.6 bits (187), Expect = 2.24e-13 Identity = 61/173 (35.26%), Postives = 84/173 (48.55%), Query Frame = 0
BLAST of Csor.00g051780 vs. ExPASy TrEMBL
Match: A0A7C9CLH3 (Uncharacterized protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 5.36e-11 Identity = 47/139 (33.81%), Postives = 70/139 (50.36%), Query Frame = 0
BLAST of Csor.00g051780 vs. ExPASy TrEMBL
Match: A0A498HL69 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_033764 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 1.91e-09 Identity = 50/142 (35.21%), Postives = 79/142 (55.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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