Csor.00g044290 (gene) Silver-seed gourd (wild; sororia) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSsinglepolypeptidestart_codonstop_codon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGGCATGAAGAAAAAATGGAGTAAGTATCTGGGTTTGGTCCGGAGCCGATCGGTGACCGGAAAACCCGCCGTTGCGGCGGAGGAGGTAACGAGAAGGAGCAAATCTTTGAACAGTGGCTCGAAATTCAGGACTCCGGTGGCTCCGGATGGTTGCTTTTCGGTGTATGTTGGACCGGAGAGGCGGCGGTTTGTGGTGAAGACGGAATTTGCGAACCATCCGTTGTTTCAGATGCTTCTTGAAGATGCTGAGATGGAATATGGGTATAATAGTCAAGGTCCGATTTGTCTTCCTTGTGAGGTGGGGATGTTTTATGATGTGTTGGCGGAGATGGACGGCGGAGATGGGCTGAGCAAGCGGTGGACGGGCGGGGAAGGTGGTGGTTTGATTGCTTGTAGCCCACTTAGGTTGACCATGTGCGGCAGTAGACAGAGTGGGTATAGGCAGCTGAGTTCGTAG ATGGAGGGCATGAAGAAAAAATGGAGTAAGTATCTGGGTTTGGTCCGGAGCCGATCGGTGACCGGAAAACCCGCCGTTGCGGCGGAGGAGGTAACGAGAAGGAGCAAATCTTTGAACAGTGGCTCGAAATTCAGGACTCCGGTGGCTCCGGATGGTTGCTTTTCGGTGTATGTTGGACCGGAGAGGCGGCGGTTTGTGGTGAAGACGGAATTTGCGAACCATCCGTTGTTTCAGATGCTTCTTGAAGATGCTGAGATGGAATATGGGTATAATAGTCAAGGTCCGATTTGTCTTCCTTGTGAGGTGGGGATGTTTTATGATGTGTTGGCGGAGATGGACGGCGGAGATGGGCTGAGCAAGCGGTGGACGGGCGGGGAAGGTGGTGGTTTGATTGCTTGTAGCCCACTTAGGTTGACCATGTGCGGCAGTAGACAGAGTGGGTATAGGCAGCTGAGTTCGTAG ATGGAGGGCATGAAGAAAAAATGGAGTAAGTATCTGGGTTTGGTCCGGAGCCGATCGGTGACCGGAAAACCCGCCGTTGCGGCGGAGGAGGTAACGAGAAGGAGCAAATCTTTGAACAGTGGCTCGAAATTCAGGACTCCGGTGGCTCCGGATGGTTGCTTTTCGGTGTATGTTGGACCGGAGAGGCGGCGGTTTGTGGTGAAGACGGAATTTGCGAACCATCCGTTGTTTCAGATGCTTCTTGAAGATGCTGAGATGGAATATGGGTATAATAGTCAAGGTCCGATTTGTCTTCCTTGTGAGGTGGGGATGTTTTATGATGTGTTGGCGGAGATGGACGGCGGAGATGGGCTGAGCAAGCGGTGGACGGGCGGGGAAGGTGGTGGTTTGATTGCTTGTAGCCCACTTAGGTTGACCATGTGCGGCAGTAGACAGAGTGGGTATAGGCAGCTGAGTTCGTAG MEGMKKKWSKYLGLVRSRSVTGKPAVAAEEVTRRSKSLNSGSKFRTPVAPDGCFSVYVGPERRRFVVKTEFANHPLFQMLLEDAEMEYGYNSQGPICLPCEVGMFYDVLAEMDGGDGLSKRWTGGEGGGLIACSPLRLTMCGSRQSGYRQLSS Homology
BLAST of Csor.00g044290 vs. ExPASy Swiss-Prot
Match: Q9ZUZ3 (Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana OX=3702 GN=SAUR32 PE=2 SV=1) HSP 1 Score: 70.1 bits (170), Expect = 2.5e-11 Identity = 35/88 (39.77%), Postives = 51/88 (57.95%), Query Frame = 0
BLAST of Csor.00g044290 vs. ExPASy Swiss-Prot
Match: Q9LTV3 (Auxin-responsive protein SAUR72 OS=Arabidopsis thaliana OX=3702 GN=SAUR72 PE=1 SV=1) HSP 1 Score: 68.9 bits (167), Expect = 5.5e-11 Identity = 36/95 (37.89%), Postives = 52/95 (54.74%), Query Frame = 0
BLAST of Csor.00g044290 vs. ExPASy Swiss-Prot
Match: Q9SGU2 (Auxin-responsive protein SAUR71 OS=Arabidopsis thaliana OX=3702 GN=SAUR71 PE=2 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 2.1e-10 Identity = 29/63 (46.03%), Postives = 38/63 (60.32%), Query Frame = 0
BLAST of Csor.00g044290 vs. ExPASy Swiss-Prot
Match: Q9SA49 (Auxin-responsive protein SAUR41 OS=Arabidopsis thaliana OX=3702 GN=SAUR41 PE=2 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.2e-08 Identity = 34/85 (40.00%), Postives = 42/85 (49.41%), Query Frame = 0
BLAST of Csor.00g044290 vs. ExPASy Swiss-Prot
Match: O64538 (Auxin-responsive protein SAUR40 OS=Arabidopsis thaliana OX=3702 GN=SAUR40 PE=2 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 1.5e-08 Identity = 27/66 (40.91%), Postives = 37/66 (56.06%), Query Frame = 0
BLAST of Csor.00g044290 vs. NCBI nr
Match: XP_022955265.1 (auxin-responsive protein SAUR32-like [Cucurbita moschata] >KAG6573144.1 Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 315 bits (807), Expect = 1.82e-108 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of Csor.00g044290 vs. NCBI nr
Match: KAG7012328.1 (Auxin-responsive protein SAUR32, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 313 bits (802), Expect = 1.06e-107 Identity = 152/153 (99.35%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of Csor.00g044290 vs. NCBI nr
Match: XP_022994487.1 (auxin-responsive protein SAUR32-like [Cucurbita maxima]) HSP 1 Score: 310 bits (793), Expect = 2.49e-106 Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 0
BLAST of Csor.00g044290 vs. NCBI nr
Match: XP_023542792.1 (auxin-responsive protein SAUR32-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 308 bits (788), Expect = 1.44e-105 Identity = 150/153 (98.04%), Postives = 150/153 (98.04%), Query Frame = 0
BLAST of Csor.00g044290 vs. NCBI nr
Match: XP_038895333.1 (uncharacterized protein LOC120083585 [Benincasa hispida]) HSP 1 Score: 251 bits (642), Expect = 4.08e-83 Identity = 123/150 (82.00%), Postives = 132/150 (88.00%), Query Frame = 0
BLAST of Csor.00g044290 vs. ExPASy TrEMBL
Match: A0A6J1GUP3 (auxin-responsive protein SAUR32-like OS=Cucurbita moschata OX=3662 GN=LOC111457276 PE=3 SV=1) HSP 1 Score: 315 bits (807), Expect = 8.82e-109 Identity = 153/153 (100.00%), Postives = 153/153 (100.00%), Query Frame = 0
BLAST of Csor.00g044290 vs. ExPASy TrEMBL
Match: A0A6J1JVZ3 (auxin-responsive protein SAUR32-like OS=Cucurbita maxima OX=3661 GN=LOC111490196 PE=3 SV=1) HSP 1 Score: 310 bits (793), Expect = 1.21e-106 Identity = 150/153 (98.04%), Postives = 151/153 (98.69%), Query Frame = 0
BLAST of Csor.00g044290 vs. ExPASy TrEMBL
Match: A0A0A0LWR6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G051690 PE=3 SV=1) HSP 1 Score: 247 bits (630), Expect = 1.38e-81 Identity = 124/157 (78.98%), Postives = 137/157 (87.26%), Query Frame = 0
BLAST of Csor.00g044290 vs. ExPASy TrEMBL
Match: A0A6J1KH82 (auxin-responsive protein SAUR71-like OS=Cucurbita maxima OX=3661 GN=LOC111495230 PE=3 SV=1) HSP 1 Score: 231 bits (588), Expect = 3.32e-75 Identity = 113/156 (72.44%), Postives = 127/156 (81.41%), Query Frame = 0
BLAST of Csor.00g044290 vs. ExPASy TrEMBL
Match: A0A5D3BJT6 (Auxin-responsive protein SAUR71-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold248G004870 PE=3 SV=1) HSP 1 Score: 228 bits (581), Expect = 3.17e-74 Identity = 120/157 (76.43%), Postives = 132/157 (84.08%), Query Frame = 0
BLAST of Csor.00g044290 vs. TAIR 10
Match: AT5G50760.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 92.4 bits (228), Expect = 3.3e-19 Identity = 44/83 (53.01%), Postives = 53/83 (63.86%), Query Frame = 0
BLAST of Csor.00g044290 vs. TAIR 10
Match: AT3G43120.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13 Identity = 31/59 (52.54%), Postives = 41/59 (69.49%), Query Frame = 0
BLAST of Csor.00g044290 vs. TAIR 10
Match: AT4G34750.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13 Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of Csor.00g044290 vs. TAIR 10
Match: AT4G34750.2 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 73.9 bits (180), Expect = 1.2e-13 Identity = 33/77 (42.86%), Postives = 50/77 (64.94%), Query Frame = 0
BLAST of Csor.00g044290 vs. TAIR 10
Match: AT5G20810.1 (SAUR-like auxin-responsive protein family ) HSP 1 Score: 71.6 bits (174), Expect = 6.1e-13 Identity = 30/64 (46.88%), Postives = 44/64 (68.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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