Csor.00g030780 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g030780
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	gibberellin-regulated protein 14-like
Location	Csor_Chr16: 6963216 .. 6964702 (-)
RNA-Seq Expression	Csor.00g030780
Synteny	Csor.00g030780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGAAATTTGCTCTGTTTACTGTTCTGATTTTGTTTTCGGCCTTCACCGCCGTCGTTCTCGGTTACGATTCGCCGGCCGCCGCCCCAAAACCCACTAAAACGGCGCATTCTTCGTCTCCGGCGCATTCACCGGTAGTTTCGCCGCCGACTCACTCTGCATCTCCTTTGACTTCTCCGACTTCTTCTCCACCGGCGAAAACTCCGGCTATTTCTCCGTCCTTGGCGACCCCACCGCCGGTATCTCCTCCGAAGGCTCCCGCTGCTGCGCCTGTTTCTTCGCCGGCGGCAAGTCCAGTAGTGAGTGGAGTTTCTCCGGTTTTATCTCCGCCATCTCCTCTGCCTTCCGATGCTTCTCCGGTGACTGCACCGGTCGGAGCTCCAGTGGAACCAGAAATCCCGGCAAACCCAATCACCGGAGGGACTCCTGTGGAGACGCCGTCGATATTTCCGTCGAGTAGCAGCCCGCCAATGTCGACACCGGCGAGCCTAGCACCGGAAACGGCAGAGCTGCCTGGAAAGGACGCGTCGGCGTCAGGGAAGTACAGAATCGGGGCGGAGGTTATTTTGAGTGGGCTGTCTATATGGGCCGTTTGGGCCTTTTGAAATTAGGCCCAATTACTGAATTTGTGTGTGAGGAGCTGTTTTTGAACAATTATTTGAGTTTTATTGTATTATTTTTGACAGAATGTATGTGGGGTTCTTGTTTTTATTCAGATTTATATATGAATATATTTTAATTTTGGAATTTAAAAAGATAAAATATTAAAATATTAACCATTCTGGAATGCGGGGAAAATTTGGAGGCTGTCGCTCTTACTGTAATGAAATGCGGGGAAATTGGTAACGAAATGCTTGAAGTTCATCTGTGAATCACTTGCATTTCTTCTTTGCGTGTCTTGAATTCGATTACTGTTCTTGGTTGTTGCTGTTTGCCTTTGTTTCATTTACAGGTTAAAAGAAAAGGAAAGATTAGTAGAGGAATGGATATAGATGTAGAATTTGTGCTTCATTTTGTCTTCTTTCAAGCGAGAGATTGAAGTTCGGTTGGAGTGTGAAATTTTCTTTACTGAAATTGAACGTTCTTTTCGAGGTTTTGGATTTGATCATCAACTTTTACGATCTCTATGCTGTTTTTCTTCATTTTCATGTTCTACTATCATTCTGCTGTAGTCTAACAAGAATAGTTGATCGCTTAATTGGAGATTTGATAGAGGAAATAAGCATTGGCGTTGGCCGTTCTGGGAGAGATTTGGTAGTTTTATTGATATCTGAACTACAACTTACTTAGGAGGTTTTGGTTTAGGGCTTCGGAAGCTTGTGATGATGATGGAAGATGGAGATTTCCCAGGATTATTGGTGAGTTTCAGTGCTATGATCATCACAAATATATGCCACTCAGGAGCTTTCTTTCTATAATCATGATTTTCTACTATGAAATGCTCTTGCTCTTCCTCATTCAGGATGGATGGATGACTCGAAGATGA

mRNA sequence

ATGGAGAAATTTGCTCTGTTTACTGTTCTGATTTTGTTTTCGGCCTTCACCGCCGTCGTTCTCGGTTACGATTCGCCGGCCGCCGCCCCAAAACCCACTAAAACGGCGCATTCTTCGTCTCCGGCGCATTCACCGGTAGTTTCGCCGCCGACTCACTCTGCATCTCCTTTGACTTCTCCGACTTCTTCTCCACCGGCGAAAACTCCGGCTATTTCTCCGTCCTTGGCGACCCCACCGCCGGTATCTCCTCCGAAGGCTCCCGCTGCTGCGCCTGTTTCTTCGCCGGCGGCAAGTCCAGTAGTGAGTGGAGTTTCTCCGGTTTTATCTCCGCCATCTCCTCTGCCTTCCGATGCTTCTCCGGTGACTGCACCGGTCGGAGCTCCAGTGGAACCAGAAATCCCGGCAAACCCAATCACCGGAGGGACTCCTGTGGAGACGCCGTCGATATTTCCGTCGAGTAGCAGCCCGCCAATGTCGACACCGGCGAGCCTAGCACCGGAAACGGCAGAGCTGCCTGGAAAGGACGCGTCGGCGTCAGGGAAGTACAGAATCGGGGCGGAGCGAGAGATTGAAGTTCGGTTGGAGTGTGAAATTTTCTTTACTGAAATTGAACGTTCTTTTCGAGGAGGTTTTGGTTTAGGGCTTCGGAAGCTTGTGATGATGATGGAAGATGGAGATTTCCCAGGATTATTGGATGGATGGATGACTCGAAGATGA

Coding sequence (CDS)

ATGGAGAAATTTGCTCTGTTTACTGTTCTGATTTTGTTTTCGGCCTTCACCGCCGTCGTTCTCGGTTACGATTCGCCGGCCGCCGCCCCAAAACCCACTAAAACGGCGCATTCTTCGTCTCCGGCGCATTCACCGGTAGTTTCGCCGCCGACTCACTCTGCATCTCCTTTGACTTCTCCGACTTCTTCTCCACCGGCGAAAACTCCGGCTATTTCTCCGTCCTTGGCGACCCCACCGCCGGTATCTCCTCCGAAGGCTCCCGCTGCTGCGCCTGTTTCTTCGCCGGCGGCAAGTCCAGTAGTGAGTGGAGTTTCTCCGGTTTTATCTCCGCCATCTCCTCTGCCTTCCGATGCTTCTCCGGTGACTGCACCGGTCGGAGCTCCAGTGGAACCAGAAATCCCGGCAAACCCAATCACCGGAGGGACTCCTGTGGAGACGCCGTCGATATTTCCGTCGAGTAGCAGCCCGCCAATGTCGACACCGGCGAGCCTAGCACCGGAAACGGCAGAGCTGCCTGGAAAGGACGCGTCGGCGTCAGGGAAGTACAGAATCGGGGCGGAGCGAGAGATTGAAGTTCGGTTGGAGTGTGAAATTTTCTTTACTGAAATTGAACGTTCTTTTCGAGGAGGTTTTGGTTTAGGGCTTCGGAAGCTTGTGATGATGATGGAAGATGGAGATTTCCCAGGATTATTGGATGGATGGATGACTCGAAGATGA

Protein sequence

MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSPTSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASPVTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASGKYRIGAEREIEVRLECEIFFTEIERSFRGGFGLGLRKLVMMMEDGDFPGLLDGWMTRR

Homology

[Close]

BLAST of Csor.00g030780 vs. NCBI nr
Match: KAG6577522.1 (hypothetical protein SDJN03_25096, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 425 bits (1093), Expect = 2.91e-149
Identity = 238/238 (100.00%), Postives = 238/238 (100.00%), Query Frame = 0


Query: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSP 60
           MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSP
Sbjct: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120
           TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180

Query: 181 KYRIGAEREIEVRLECEIFFTEIERSFRGGFGLGLRKLVMMMEDGDFPGLLDGWMTRR 238
           KYRIGAEREIEVRLECEIFFTEIERSFRGGFGLGLRKLVMMMEDGDFPGLLDGWMTRR
Sbjct: 181 KYRIGAEREIEVRLECEIFFTEIERSFRGGFGLGLRKLVMMMEDGDFPGLLDGWMTRR 238

[Close]

BLAST of Csor.00g030780 vs. NCBI nr
Match: KAG7015581.1 (hypothetical protein SDJN02_23217, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 407 bits (1045), Expect = 3.21e-141
Identity = 230/231 (99.57%), Postives = 230/231 (99.57%), Query Frame = 0


Query: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSP 60
           MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHS SPAHSPVVSPPTHSASPLTSP
Sbjct: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120
           TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180

Query: 181 KYRIGAEREIEVRLECEIFFTEIERSFRGGFGLGLRKLVMMMEDGDFPGLL 231
           KYRIGAEREIEVRLECEIFFTEIERSFRGGFGLGLRKLVMMMEDGDFPGLL
Sbjct: 181 KYRIGAEREIEVRLECEIFFTEIERSFRGGFGLGLRKLVMMMEDGDFPGLL 231

[Close]

BLAST of Csor.00g030780 vs. NCBI nr
Match: XP_022932347.1 (gibberellin-regulated protein 14-like [Cucurbita moschata])

HSP 1 Score: 318 bits (814), Expect = 2.47e-107
Identity = 185/187 (98.93%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSP 60
           MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHS SPAHSPVVSPPTHSASPLTSP
Sbjct: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120
           TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP+LSPPSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPILSPPSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180

Query: 181 KYRIGAE 187
           KYRIGAE
Sbjct: 181 KYRIGAE 187

[Close]

BLAST of Csor.00g030780 vs. NCBI nr
Match: XP_023552940.1 (gibberellin-regulated protein 14-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 303 bits (775), Expect = 1.86e-101
Identity = 180/187 (96.26%), Postives = 180/187 (96.26%), Query Frame = 0


Query: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSP 60
           MEKF LFTVLILFSAFTAVV GYDSPAAAPKPTKTAHS SPAHSPVVSPPTHSASPLTSP
Sbjct: 1   MEKFPLFTVLILFSAFTAVVFGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120
           TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP    PSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP----PSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180

Query: 181 KYRIGAE 187
           KYRIGAE
Sbjct: 181 KYRIGAE 183

[Close]

BLAST of Csor.00g030780 vs. NCBI nr
Match: XP_023007601.1 (gibberellin-regulated protein 14-like [Cucurbita maxima])

HSP 1 Score: 300 bits (769), Expect = 1.75e-100
Identity = 177/187 (94.65%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSP 60
           ME FALFTVLILFSAFTAVVL YDS AAAPKPTKTA+S SPAHSPV SPP+HSASPLTSP
Sbjct: 1   MENFALFTVLILFSAFTAVVLAYDSTAAAPKPTKTAYSPSPAHSPVFSPPSHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120
           TSSPPAKTPAISPSL TPPPVSPPK PAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLVTPPPVSPPKTPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDAS SG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASTSG 180

Query: 181 KYRIGAE 187
           KYRIGAE
Sbjct: 181 KYRIGAE 187

[Close]

BLAST of Csor.00g030780 vs. ExPASy TrEMBL
Match: A0A6J1EWE6 (gibberellin-regulated protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111438730 PE=4 SV=1)

HSP 1 Score: 318 bits (814), Expect = 1.20e-107
Identity = 185/187 (98.93%), Postives = 186/187 (99.47%), Query Frame = 0


Query: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSP 60
           MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHS SPAHSPVVSPPTHSASPLTSP
Sbjct: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSPSPAHSPVVSPPTHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120
           TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSP+LSPPSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPILSPPSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180

Query: 181 KYRIGAE 187
           KYRIGAE
Sbjct: 181 KYRIGAE 187

[Close]

BLAST of Csor.00g030780 vs. ExPASy TrEMBL
Match: A0A6J1L107 (gibberellin-regulated protein 14-like OS=Cucurbita maxima OX=3661 GN=LOC111500173 PE=4 SV=1)

HSP 1 Score: 300 bits (769), Expect = 8.45e-101
Identity = 177/187 (94.65%), Postives = 179/187 (95.72%), Query Frame = 0


Query: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSP 60
           ME FALFTVLILFSAFTAVVL YDS AAAPKPTKTA+S SPAHSPV SPP+HSASPLTSP
Sbjct: 1   MENFALFTVLILFSAFTAVVLAYDSTAAAPKPTKTAYSPSPAHSPVFSPPSHSASPLTSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120
           TSSPPAKTPAISPSL TPPPVSPPK PAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP
Sbjct: 61  TSSPPAKTPAISPSLVTPPPVSPPKTPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDAS SG
Sbjct: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASTSG 180

Query: 181 KYRIGAE 187
           KYRIGAE
Sbjct: 181 KYRIGAE 187

[Close]

BLAST of Csor.00g030780 vs. ExPASy TrEMBL
Match: A0A6J1DWL9 (classical arabinogalactan protein 4-like OS=Momordica charantia OX=3673 GN=LOC111024744 PE=4 SV=1)

HSP 1 Score: 214 bits (545), Expect = 1.03e-66
Identity = 139/192 (72.40%), Postives = 152/192 (79.17%), Query Frame = 0


Query: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSP 60
           MEK A  TVL+LF+ FT VVL YD+PA +PKPTKT HS  P HSP VS P+HSASP  SP
Sbjct: 1   MEKLAWLTVLVLFAPFTGVVLAYDAPAPSPKPTKTPHSPPPVHSPAVSRPSHSASPSKSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120
            +SPPA TP ISP+L+TPP  SP +APAAAP SSP ASPV S VSPV SPPSP PS ASP
Sbjct: 61  AASPPATTPTISPALSTPPAASP-EAPAAAPASSPVASPVGSEVSPVSSPPSPPPSVASP 120

Query: 121 V----TAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDA 180
           V    T P G+P EPEIPANPITGG+PVETPSIFPSSSSPPMS+P SLAPETAE PG DA
Sbjct: 121 VSTPATTPAGSPPEPEIPANPITGGSPVETPSIFPSSSSPPMSSPGSLAPETAERPGNDA 180

Query: 181 SASG-KYRIGAE 187
           SAS  KY+IGAE
Sbjct: 181 SASEWKYKIGAE 191

[Close]

BLAST of Csor.00g030780 vs. ExPASy TrEMBL
Match: A0A5A7VJY8 (Extensin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00140 PE=4 SV=1)

HSP 1 Score: 209 bits (532), Expect = 6.09e-65
Identity = 132/187 (70.59%), Postives = 147/187 (78.61%), Query Frame = 0


Query: 1   MEKFALFTVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTSP 60
           M  FALFTVL   S F  +V  YDSPAA+PKP KTAHS SPAHSPVVSPP+ S SP  SP
Sbjct: 1   MGNFALFTVLFFLSPFIGLVFAYDSPAASPKPPKTAHSPSPAHSPVVSPPSRSLSPSKSP 60

Query: 61  TSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDASP 120
           T+SPP  TP ISP+LATPP V+P KAPAA P+SSP+ +      SPV SPPSPLP DASP
Sbjct: 61  TASPPMLTPEISPALATPPSVAPSKAPAAVPISSPSEN------SPVSSPPSPLPFDASP 120

Query: 121 VTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASASG 180
           V    GAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP +LAPETAE PG DASASG
Sbjct: 121 V----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTNLAPETAERPGNDASASG 177

Query: 181 KYRIGAE 187
           +Y+IG E
Sbjct: 181 RYKIGVE 177

[Close]

BLAST of Csor.00g030780 vs. ExPASy TrEMBL
Match: A0A0A0L269 (Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_3G047810 PE=4 SV=1)

HSP 1 Score: 206 bits (525), Expect = 7.23e-64
Identity = 132/188 (70.21%), Postives = 148/188 (78.72%), Query Frame = 0


Query: 1   MEKFALF-TVLILFSAFTAVVLGYDSPAAAPKPTKTAHSSSPAHSPVVSPPTHSASPLTS 60
           M KFALF T+L LFS F  +V   DSPAA+PKP KT HS SPAHSPVVSPP+H+ SP  S
Sbjct: 1   MAKFALFITLLFLFSPFIGLVFANDSPAASPKPPKTLHSPSPAHSPVVSPPSHTVSPSKS 60

Query: 61  PTSSPPAKTPAISPSLATPPPVSPPKAPAAAPVSSPAASPVVSGVSPVLSPPSPLPSDAS 120
           P +SPP  TP ISP+LATPP V+P KAPAA P+SSP+ +      SP+ SPPSPLP DAS
Sbjct: 61  PAASPPVVTPVISPALATPPSVAPSKAPAAVPISSPSEN------SPLSSPPSPLPFDAS 120

Query: 121 PVTAPVGAPVEPEIPANPITGGTPVETPSIFPSSSSPPMSTPASLAPETAELPGKDASAS 180
           PV    GAPVEPEIPANPI+GG+PV TPSIFPSSSSPPM+TP SLAPETAE PG DASAS
Sbjct: 121 PV----GAPVEPEIPANPISGGSPVGTPSIFPSSSSPPMATPTSLAPETAERPGNDASAS 178

Query: 181 GKYRIGAE 187
           GKY+IG E
Sbjct: 181 GKYKIGVE 178

The following BLAST results are available for this feature:

BLAST of Csor.00g030780 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g030780 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6577522.1	2.91e-149	100.00	hypothetical protein SDJN03_25096, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7015581.1	3.21e-141	99.57	hypothetical protein SDJN02_23217, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022932347.1	2.47e-107	98.93	gibberellin-regulated protein 14-like [Cucurbita moschata]	[more]
XP_023552940.1	1.86e-101	96.26	gibberellin-regulated protein 14-like [Cucurbita pepo subsp. pepo]	[more]
XP_023007601.1	1.75e-100	94.65	gibberellin-regulated protein 14-like [Cucurbita maxima]	[more]

BLAST of Csor.00g030780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1EWE6	1.20e-107	98.93	gibberellin-regulated protein 14-like OS=Cucurbita moschata OX=3662 GN=LOC111438...	[more]
A0A6J1L107	8.45e-101	94.65	gibberellin-regulated protein 14-like OS=Cucurbita maxima OX=3661 GN=LOC11150017...	[more]
A0A6J1DWL9	1.03e-66	72.40	classical arabinogalactan protein 4-like OS=Momordica charantia OX=3673 GN=LOC11...	[more]
A0A5A7VJY8	6.09e-65	70.59	Extensin-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold488G00140 ...	[more]
A0A0A0L269	7.23e-64	70.21	Lipid binding protein OS=Cucumis sativus OX=3659 GN=Csa_3G047810 PE=4 SV=1	[more]

BLAST of Csor.00g030780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR01217	PRICHEXTENSN	coord: 107..124 score: 36.67 coord: 84..100 score: 24.71 coord: 62..83 score: 35.45 coord: 27..43 score: 32.94 coord: 47..59 score: 38.46
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 141..162
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 62..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 27..176
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..61

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g030780.m01	Csor.00g030780.m01	mRNA