Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglepolypeptidestart_codonstop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGACAAAAATGGAAGTTGAAGAAGAATTGAAGAAGATGATGGAAGAAGTGCAAGGCATGGGGGAGAATGTAGAAGCCAAAGTGAATTACTATGACACCAAATTACACAACATCATTGTCGCTTATTTCGTTTGGGAACGTGTGTTCTTCTTCGGTATCTCCAAGAAGACGTTTCCTCCCACCATTTCTACCCTCAGCTGCAATGGAAACTGGTGGGTTATTCTTGCTTTGAGTTCTTCATGCAGCTTCGTTTACGTGCTACTTTTTTTTGACACTGCTCTCATGCTCTACCGCCACGAAAATCAACTCCATCTCATCCTCCAAAAACATGCTCAACTTTGCCGACATCTCTTGGCAATCAAAGAAGAACAAGCTGACATCAAAGCTTCTTTAATGGAGGCCGGAGATGAGGCCAGCCATGGGTTGTCGCTTGAGGAGGAATTGATGCTCATAAACTCGACCTCACCATTTAGGAGGAGGAGGCCTTGGGAGAGGAAAGTTTATGTGTACACCATCTTTTGTGCTTTGATTGGCGTTGCTTCTTTGGAACTATACGCCTGCAAGGCCGTGCTCTGCCCTTGA
mRNA sequence
ATGACAAAAATGGAAGTTGAAGAAGAATTGAAGAAGATGATGGAAGAAGTGCAAGGCATGGGGGAGAATGTAGAAGCCAAAGTGAATTACTATGACACCAAATTACACAACATCATTGTCGCTTATTTCGTTTGGGAACGTGTGTTCTTCTTCGGTATCTCCAAGAAGACGTTTCCTCCCACCATTTCTACCCTCAGCTGCAATGGAAACTGGTGGGTTATTCTTGCTTTGAGTTCTTCATGCAGCTTCGTTTACGTGCTACTTTTTTTTGACACTGCTCTCATGCTCTACCGCCACGAAAATCAACTCCATCTCATCCTCCAAAAACATGCTCAACTTTGCCGACATCTCTTGGCAATCAAAGAAGAACAAGCTGACATCAAAGCTTCTTTAATGGAGGCCGGAGATGAGGCCAGCCATGGGTTGTCGCTTGAGGAGGAATTGATGCTCATAAACTCGACCTCACCATTTAGGAGGAGGAGGCCTTGGGAGAGGAAAGTTTATGTGTACACCATCTTTTGTGCTTTGATTGGCGTTGCTTCTTTGGAACTATACGCCTGCAAGGCCGTGCTCTGCCCTTGA
Coding sequence (CDS)
ATGACAAAAATGGAAGTTGAAGAAGAATTGAAGAAGATGATGGAAGAAGTGCAAGGCATGGGGGAGAATGTAGAAGCCAAAGTGAATTACTATGACACCAAATTACACAACATCATTGTCGCTTATTTCGTTTGGGAACGTGTGTTCTTCTTCGGTATCTCCAAGAAGACGTTTCCTCCCACCATTTCTACCCTCAGCTGCAATGGAAACTGGTGGGTTATTCTTGCTTTGAGTTCTTCATGCAGCTTCGTTTACGTGCTACTTTTTTTTGACACTGCTCTCATGCTCTACCGCCACGAAAATCAACTCCATCTCATCCTCCAAAAACATGCTCAACTTTGCCGACATCTCTTGGCAATCAAAGAAGAACAAGCTGACATCAAAGCTTCTTTAATGGAGGCCGGAGATGAGGCCAGCCATGGGTTGTCGCTTGAGGAGGAATTGATGCTCATAAACTCGACCTCACCATTTAGGAGGAGGAGGCCTTGGGAGAGGAAAGTTTATGTGTACACCATCTTTTGTGCTTTGATTGGCGTTGCTTCTTTGGAACTATACGCCTGCAAGGCCGTGCTCTGCCCTTGA
Protein sequence
MTKMEVEEELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPTISTLSCNGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAIKEEQADIKASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVASLELYACKAVLCP
Homology
BLAST of Csor.00g010470 vs. NCBI nr
Match:
KAG6579345.1 (hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 384 bits (987), Expect = 1.35e-134
Identity = 193/193 (100.00%), Postives = 193/193 (100.00%), Query Frame = 0
Query: 1 MTKMEVEEELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPP 60
MTKMEVEEELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPP
Sbjct: 1 MTKMEVEEELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPP 60
Query: 61 TISTLSCNGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAI 120
TISTLSCNGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAI
Sbjct: 61 TISTLSCNGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAI 120
Query: 121 KEEQADIKASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVA 180
KEEQADIKASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVA
Sbjct: 121 KEEQADIKASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVA 180
Query: 181 SLELYACKAVLCP 193
SLELYACKAVLCP
Sbjct: 181 SLELYACKAVLCP 193
BLAST of Csor.00g010470 vs. NCBI nr
Match:
KAG6579352.1 (hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 355 bits (910), Expect = 6.46e-123
Identity = 180/190 (94.74%), Postives = 182/190 (95.79%), Query Frame = 0
Query: 4 MEVEEELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPTIS 63
MEVEE LKKMMEEVQGMGE VEAKVNYYDTKLH IIVAYFVWERVFFFGISKKTFP TIS
Sbjct: 1 MEVEE-LKKMMEEVQGMGEKVEAKVNYYDTKLHTIIVAYFVWERVFFFGISKKTFPSTIS 60
Query: 64 TLSCNGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAIKEE 123
TLSCNGNWWVILALS SCSFVYVLLFFD ALMLYRHENQLHLILQKHAQLCRHLLAIKEE
Sbjct: 61 TLSCNGNWWVILALSCSCSFVYVLLFFDAALMLYRHENQLHLILQKHAQLCRHLLAIKEE 120
Query: 124 QADIKASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVASLE 183
QAD KASLMEAGD+ASHGLSLEEELMLINSTSPFRRRRPWERKV+VYTIFCA IGVASLE
Sbjct: 121 QADTKASLMEAGDQASHGLSLEEELMLINSTSPFRRRRPWERKVHVYTIFCAFIGVASLE 180
Query: 184 LYACKAVLCP 193
LYACKAVLCP
Sbjct: 181 LYACKAVLCP 189
BLAST of Csor.00g010470 vs. NCBI nr
Match:
KAG6579344.1 (hypothetical protein SDJN03_23792, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 257 bits (656), Expect = 2.98e-84
Identity = 138/194 (71.13%), Postives = 153/194 (78.87%), Query Frame = 0
Query: 4 MEVEEELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFF-----GISKKTF 63
ME+EE+++K MEEV+GM E VE +VNYYDTKLH IIVAY VWERVFFF G+S F
Sbjct: 1 MEIEEQMEKRMEEVKGMWEKVEGRVNYYDTKLHAIIVAYLVWERVFFFFFFFFGVSNTNF 60
Query: 64 PPTISTLSCNGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLL 123
ISTLSCNG WWVI+ALS CSFVY+LLF D ALMLY H+NQL+LILQ H QL R LL
Sbjct: 61 ASNISTLSCNGKWWVIVALSCLCSFVYMLLFVDAALMLYPHQNQLNLILQTHHQLYRQLL 120
Query: 124 AIKEEQADIKASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIG 183
AIK+ SLMEAGDEASHGLSLEEELMLINS + +RRR PW RK YVYTIFCALI
Sbjct: 121 AIKD-------SLMEAGDEASHGLSLEEELMLINSNAAYRRR-PWGRKFYVYTIFCALID 180
Query: 184 VASLELYACKAVLC 192
VASLELYAC +VLC
Sbjct: 181 VASLELYACNSVLC 186
BLAST of Csor.00g010470 vs. NCBI nr
Match:
KAE8650729.1 (hypothetical protein Csa_023412 [Cucumis sativus])
HSP 1 Score: 179 bits (453), Expect = 1.82e-53
Identity = 104/186 (55.91%), Postives = 126/186 (67.74%), Query Frame = 0
Query: 8 EELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPT-ISTLS 67
EEL+K MEE++ M E EA NYYDTKLH II AYF+WER F F IS KT P S+L
Sbjct: 8 EELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFSSLI 67
Query: 68 CNGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAIKEEQAD 127
C+ NW +ILALSS S VY+LL+ D ALMLYR E + +LIL KHAQL + IK+E
Sbjct: 68 CHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQEFNS 127
Query: 128 IKASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVASLELYA 187
I +S MEA E+ ++LINS+S FRR ER Y+ TIFCAL+ VASLELYA
Sbjct: 128 IDSSSMEAE---------EDLILLINSSSTFRRSE--ERIFYMSTIFCALVCVASLELYA 182
Query: 188 CKAVLC 192
CK++LC
Sbjct: 188 CKSILC 182
BLAST of Csor.00g010470 vs. NCBI nr
Match:
XP_022157182.1 (uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncharacterized protein LOC111023958 [Momordica charantia])
HSP 1 Score: 116 bits (291), Expect = 4.20e-29
Identity = 68/184 (36.96%), Postives = 108/184 (58.70%), Query Frame = 0
Query: 9 ELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPTISTLSCN 68
EL++ EE++ + E E++V YY+TK+ NI+ Y ++ R+FFFGIS+ T S+ +C
Sbjct: 5 ELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQ-----TSSSFNCK 64
Query: 69 GNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAIKEEQADIK 128
+WWVILALS CSF+Y LLF D ML+R + QL +I ++ +L + +L + + Q D+
Sbjct: 65 -DWWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQIL-VSKNQDDVG 124
Query: 129 ASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVASLELYACK 188
S+ E++++++ R RKVY+Y AL+ V ++ELY K
Sbjct: 125 LSMETGESSGGFEFGFHEKMLMLDHF------RIVGRKVYIYFTVSALLAVTAIELYVSK 175
Query: 189 AVLC 192
VLC
Sbjct: 185 YVLC 175
BLAST of Csor.00g010470 vs. ExPASy TrEMBL
Match:
A0A0A0L822 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G484330 PE=4 SV=1)
HSP 1 Score: 179 bits (453), Expect = 7.77e-54
Identity = 104/186 (55.91%), Postives = 126/186 (67.74%), Query Frame = 0
Query: 8 EELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPT-ISTLS 67
EEL+K MEE++ M E EA NYYDTKLH II AYF+WER F F IS KT P S+L
Sbjct: 4 EELEKRMEELKAMSEKQEATANYYDTKLHTIIAAYFIWERAFCFAISNKTNSPNYFSSLI 63
Query: 68 CNGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAIKEEQAD 127
C+ NW +ILALSS S VY+LL+ D ALMLYR E + +LIL KHAQL + IK+E
Sbjct: 64 CHANWRLILALSSLYSLVYILLYLDAALMLYRSELKQNLILNKHAQLYHQISKIKQEFNS 123
Query: 128 IKASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVASLELYA 187
I +S MEA E+ ++LINS+S FRR ER Y+ TIFCAL+ VASLELYA
Sbjct: 124 IDSSSMEAE---------EDLILLINSSSTFRRSE--ERIFYMSTIFCALVCVASLELYA 178
Query: 188 CKAVLC 192
CK++LC
Sbjct: 184 CKSILC 178
BLAST of Csor.00g010470 vs. ExPASy TrEMBL
Match:
A0A6J1DSQ0 (uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023958 PE=4 SV=1)
HSP 1 Score: 116 bits (291), Expect = 2.04e-29
Identity = 68/184 (36.96%), Postives = 108/184 (58.70%), Query Frame = 0
Query: 9 ELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPTISTLSCN 68
EL++ EE++ + E E++V YY+TK+ NI+ Y ++ R+FFFGIS+ T S+ +C
Sbjct: 5 ELERKFEELKDINEKQESRVRYYETKVQNIVFGYLIFTRLFFFGISQ-----TSSSFNCK 64
Query: 69 GNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAIKEEQADIK 128
+WWVILALS CSF+Y LLF D ML+R + QL +I ++ +L + +L + + Q D+
Sbjct: 65 -DWWVILALSLLCSFIYFLLFLDAVAMLFRTQYQLDIICKELKELFQQIL-VSKNQDDVG 124
Query: 129 ASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVASLELYACK 188
S+ E++++++ R RKVY+Y AL+ V ++ELY K
Sbjct: 125 LSMETGESSGGFEFGFHEKMLMLDHF------RIVGRKVYIYFTVSALLAVTAIELYVSK 175
Query: 189 AVLC 192
VLC
Sbjct: 185 YVLC 175
BLAST of Csor.00g010470 vs. ExPASy TrEMBL
Match:
A0A6J1DS87 (uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023927 PE=4 SV=1)
HSP 1 Score: 114 bits (286), Expect = 1.31e-28
Identity = 66/184 (35.87%), Postives = 109/184 (59.24%), Query Frame = 0
Query: 9 ELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPTISTLSCN 68
ELK+ E ++ + E E++V Y++++ NI +AY +W R+FFF IS+ + S L C
Sbjct: 5 ELKRNFEALKDLVEKQESRVQYHESRAQNITMAYLIWGRLFFFAISQTS----SSLLKCI 64
Query: 69 GNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAIKEEQADIK 128
+WW++L LS SC+FVY L F + MLYR ++Q+ +I ++ A++C+ +L + + D+
Sbjct: 65 -DWWMVLGLSVSCAFVYFLFFLEAVTMLYRVQHQMDIICKEQAEICQQILVARSQLDDVD 124
Query: 129 ASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVASLELYACK 188
+ MEAGD +S G + L+ + R ERK Y+ AL+ V ++ELYAC
Sbjct: 125 LA-MEAGD-SSDGFQFSFHVKLLE----YGAFRIVERKFYICATVSALLAVTAIELYACS 177
Query: 189 AVLC 192
+ C
Sbjct: 185 WLYC 177
BLAST of Csor.00g010470 vs. ExPASy TrEMBL
Match:
A0A0A0KUT0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1)
HSP 1 Score: 109 bits (273), Expect = 9.85e-27
Identity = 69/190 (36.32%), Postives = 113/190 (59.47%), Query Frame = 0
Query: 5 EVEEELKKMMEEVQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPTIST 64
E+ EE++K++EE+ M + + +V Y+T L NI +A+ VW R+FFF +S+ + P S
Sbjct: 4 ELIEEMQKVLEELNAMADTQKGRVENYETSLQNIAIAFLVWLRLFFFSLSQTS--PNSSL 63
Query: 65 LSCNGNWWVILALSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHL--LAIKE 124
L C +WW++ AL+ +F+Y+LLF +LML R E QLH+I ++ QL + + L ++E
Sbjct: 64 LHCK-HWWLLFALTCFSAFLYILLFIHNSLMLSRTERQLHVISRQQIQLHQQIWMLRLQE 123
Query: 125 EQADIKASLMEAGDEASHGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVASL 184
I+ +M+ H ++ E + TS F ERK+Y+ I C IG+ +L
Sbjct: 124 LPQMIEPIIMD------HIINGE-----MGRTSTF------ERKLYINCILCGFIGIVAL 173
Query: 185 ELYACKAVLC 192
ELYA +++LC
Sbjct: 184 ELYASRSLLC 173
BLAST of Csor.00g010470 vs. ExPASy TrEMBL
Match:
A0A5A7TMJ1 (WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold376G00790 PE=4 SV=1)
HSP 1 Score: 109 bits (272), Expect = 4.25e-26
Identity = 64/177 (36.16%), Postives = 104/177 (58.76%), Query Frame = 0
Query: 17 VQGMGENVEAKVNYYDTKLHNIIVAYFVWERVFFFGISKKTFPPTISTLSCNGNWWVILA 76
++ + +N E + Y +TKL N+++ Y W R+FFFG+S C +WWVILA
Sbjct: 57 LKDINDNQETSLRYCETKLQNVVLGYLSWGRLFFFGVSFS--------FKCK-DWWVILA 116
Query: 77 LSSSCSFVYVLLFFDTALMLYRHENQLHLILQKHAQLCRHLLAIKEEQADIKASLMEAGD 136
L+ +F Y LLF D +ML R +QL +I ++ A++C+ +L + + Q ++ S MEAG+
Sbjct: 117 LTLFYTFFYFLLFMDAVIMLSRTHDQLDIIRKELAEICQQIL-VAQNQDNVGLS-MEAGE 176
Query: 137 EAS-HGLSLEEELMLINSTSPFRRRRPWERKVYVYTIFCALIGVASLELYACKAVLC 192
++ LS E + +++ R RKVY+Y I C L+ + ++ELYACK +LC
Sbjct: 177 DSDGFELSFHERMFMLDQF----RVVETGRKVYIYFIVCPLLAITAIELYACKCLLC 218
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6579345.1 | 1.35e-134 | 100.00 | hypothetical protein SDJN03_23793, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6579352.1 | 6.46e-123 | 94.74 | hypothetical protein SDJN03_23800, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG6579344.1 | 2.98e-84 | 71.13 | hypothetical protein SDJN03_23792, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAE8650729.1 | 1.82e-53 | 55.91 | hypothetical protein Csa_023412 [Cucumis sativus] | [more] |
XP_022157182.1 | 4.20e-29 | 36.96 | uncharacterized protein LOC111023958 [Momordica charantia] >XP_022157183.1 uncha... | [more] |
Match Name | E-value | Identity | Description | |
A0A0A0L822 | 7.77e-54 | 55.91 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G484330 PE=4 SV=1 | [more] |
A0A6J1DSQ0 | 2.04e-29 | 36.96 | uncharacterized protein LOC111023958 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A6J1DS87 | 1.31e-28 | 35.87 | uncharacterized protein LOC111023927 OS=Momordica charantia OX=3673 GN=LOC111023... | [more] |
A0A0A0KUT0 | 9.85e-27 | 36.32 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G562290 PE=4 SV=1 | [more] |
A0A5A7TMJ1 | 4.25e-26 | 36.16 | WD repeat-containing protein 91-like protein OS=Cucumis melo var. makuwa OX=1194... | [more] |
Match Name | E-value | Identity | Description | |