Csor.00g008460 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g008460
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	RRM domain-containing protein
Location	Csor_Chr08: 878457 .. 883567 (+)
RNA-Seq Expression	Csor.00g008460
Synteny	Csor.00g008460

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSinitialstart_codonpolypeptideintroninternalterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAACCTTACAACTTCGAGGTATATGAAGTCATCCACACTCTATCTTCATCGTGTATGTAACGAACGCTTCGTTCTTTGCACTGGGCACCGTCGGTCAAAAGATTATAGCCTTTTTGAATCTGGGTACGTAAATAAGCGCTACCCATCAATTATTAATACCCAAAAGCTTCACTGTTTCGGCTTTGGATACTCGCAATCAATAATTATTAATACCCAAAAGCTTCAACGTTTTGGCTTTGGATACTCGCAATAACATCCTATTCCAACTTCATCCAACCATACCATTGAAAAAAGAAATCAACTTTAAGAAAGGGAAAGAGAAATGAAATGATGGGTGAGTCTTACTCTTGAGGTATTTTCTTCAAACGTCATGCCATATGTCACGATTATGCTCGTTTTGTTGTCCATGACCGCATACCCGTTGCATGCCAAATCTCTTGTATTGTATCACTTTATTGCTTTCGTTCATCGCTTTCATGATGTTTAGTTCTTTTTTGTATTTTGTACTATAGGGAGATACGATTAGTCGTTAATTATTCATAACAAGAGTTATATGCTATTTAAACGGTTGTGTTCTCTTTCTACTTAAAACATTGCTTTCAAACCCCTTTTTTCGAAAATCTCTCTATCCAAGAGAAGTCCCAAGAAAATCCAGACCCAACCCATAAAAGTTAGTCCAGACACCAACCAAGGCTAACCCTATTCAGCTAGGCCAACCAAAGGAACCTAGCCGAGCCTCCGTGAGTAAAAGACCAACAAGGACAACCCTTTTTTAAAAAATCTCTCTACCCAAGAGAAGTCCCAAGAAAATCCAGACCCAACGCATAGAAGTTAGTCCAGACACCGACCAAGGCTAACCCTATTCAGCTAGGCCAACCCAAAGGAATCTAGCTGAGCCCCCGTGAGTAAAAGACCAACAAGGACAACCCTTTTTAAAAAAATCTCTCTACCCAAGAGAAGTCCTAAGAAAATCCAGACCCAACCCATAAAAGTTAGCCCAGATGCCAACCAAGGCTGACCCTATTCAGCTAGGCCAACCCAAGTGAACCTAGCCGAGCCCCAGTGAGTAAAAGACCGACAAGGACAAGCCTAGTCGTCAACACTTCCTACCCGGAGTTACTATGCTATTTAAGCTCTTGTGTTGTCTTTCTTGCTTATAGCTTATAACATTGCTTTCAAACATTGTTTCGAAAATCTCTCTACCCAAGAGAAGTCCCAAGAAAATCCAAGACCCAACCCATAAAAGTTAGCCCAGACGCCGACCAAGGCTGACCCTATTCAGCTAGGCCAACCCCAGTGAACCTAGCCGAGCCCCAGTGAGTAAAAGACCGACAAGGACAAGCCTAGTCGTCAACACTTCCTACCCGGAGTTACTATGCTATTTAAGCTCTCGTGTTGTCTTTCTCGCTTATAGCTTATAACATTGCTTTCAAACATTTTTTTAGAAAATCTCTCTACCCAAGAGAAGTCCCAAGAAAATCCAGACCCAACCCATAAAAGTTAGTCCAGACACCGACCAAGCGGACCCTATTCAGCTAGGCCAACCCAAGTGAACCTAGCCGAGCCCCAGTGAGCAAAAAACCAACCAGGACAAGCCTAGACCTGAAATCTAAGGTTTTCGATCAACCCTATAAGACTTATTCCATCTAGATCGAGCCAAATGATTCAGTTCAAAAATGGTTCACCGAGCTCTAAGAATCATACCCGTGAAAAAGAAAATTAGATAAATTTACCAAGTCGAGTTTACTAATCATTCAAACCTATTAAATACAAAATTGTGAAACAAAGACAAGTAGGAGAGAGAGAGAGGGGAGAGAGAGAGAGAGACAGCAAAGCAAAGGGTAAGCAAGACCAATCCAGCAAATATATAATAGCAAAAGACTAAAAAAAATTCCATTTTGGGTATCACCAAAATCTCTCTTGAGGCGCTGTCGTGGTTCGTGGGAACCCACTAGCAGCTCCCCTTTCCCCTTCCGTTTTTTCTTTGTCGAAATGGGGATTTCATTTGGTGTTCTTCTGGGTTTTTTAGGTCACATTTAAGGATCCTGATGCTGCCATTAGAGCTTGTCAAAACCCTTCCCCTGTGATCGATGGAAGAAGGGCTAATTGCAATCTTGCTTCCCTTGGTGCTCATAAGCCTCAACATGGTTCTTGATTGTTCTTTCTTTTTGTTTTCGTCTCTTAAATGGATCATATTAGTTTATGCATGCAAGGTGTTTGATATTTTGCCTCTTCCAAAACCTGTGATGACTTCCTTCAATGGAGGCCTCTGAATCTGTGTTTTTTGTTGTGGAGGGATATATGAAATCTAAACAAACAAAGGAAGCCATGTTTTTCAAAGATTAACCACAAAAGATTGAACAAATTTGCAGGTGGTGGTGGAAGATTTAGAGGTCCATCTGGGATTGTGACCCCTCCTGCTTATCATGTTTCTTCATCGTCTTATGTTCATCAGCCCACTTCTCAATATCCATTCCCTCTTTCAGCTTATGGGTAAGGTTGCAAGAGGAATCATTAATGCATGAACAAACCCAAGTTCTCAATTTTCCTGTTTTTTTGATTCAATTTGTTCTTTTTGATTCTTTTGGCCTAATTTCAGCTATTCTGGATATTCACAAGACAGGATTTATCCAATGGTGCGAATGTTTTAATGTTGGTTTGTGTTTGTAATGTTCTTAGCATTGATTTGATCTGAGCTTGGTCGTGTTTTGTAAGCAGAGCTATTATGGTGTTTATGGTGGCCAACAATTTTCTCCTTATTACTCTGCAAACGCGATTCCGGGACCAGCTGGAATGTTTCAAAATCTCTATCCGTATTACGCTCAAAGTAGCCAGGGATACGAGTTCGGAGTCCAGTATCCACACCTAATGCAGTACCCGTATCTTCCTCAGCAGCACGGTTCGACCGGTATCCTATCACTGCCTGTCTCGACCGCAACAGGAACAACCAGTGCAGGTGATTCTTGTAATCTAATCCTTGTTATCTAAAGAATGTCATTCGTTTGGAGCATGTTGGTTTTGAAAGTGAATGTAACAGGTGCAGCAGCAACGACGACGACGACAATGGCAGTTGGAGGATCGGGGCCTCTACAAACTTCTTCTGCGGTAGCAACCGAACCGAATTCTTCCGAGGTAATCTCAACTGGATGACACAAATGCCTTGTTGTCACACGCTAACCACATCGACAAAGCTTGAATACTGAATAACAATGGCAAGTTTTTAAGTCGTGTGATTCGATAAGAAGGATGAGGAAAAGGAAAAGGAAATTCACGTTCCAGCATCGTCAAGTCGTTCATGAAAACGTCGGTAACAAGCATATCCCATCTCTATCAAGTATCAACATTATTTACGTTTGGTCATCTGCCATTAGTTTGTTAGAACAATTAGCTTAAGAATTTTATTCATTCATGTATTATGCGAAAAGACGGGGAACCAAATGAAGGGTTTGGATTCTTCCCGTGTTTCGTTCTGACTGCAACAAGACGATCGTGTCGGGGAAGCACGTAGCCTCCTACGACACTGTCTTGTTTCGATATGATTAACCGTGTACGGTTCAAAAGATTGATTTTATATCTTTTGAGCTTCACAATTTGTGGTTGGTGAAGAAGGGAGTGGGATTAGTTAGAAAAAGATATCTGTGTAATATGTTTGAGCAAAATTATTGGGTGTTCTTCTGCTGTTCTTTCACATATCATTATCAGTTGGGGTTCTTTTTGGTTATTAGGATTCTCTGGCTTACCATAATATCACCTCTTTTCCTCTTTCCAGACTGTGTATGGAATCCAAAGCCTCCTAATAATTTCATGTCTTTCTTACCTTTTGAATTTTCTTCTTCCTTTTCTGTGGGTTTCTGTCATAAAGTTGCTCATGGCTGGCTGTAGGGAATCTATGTGCTACTATAACTAGCGGGACAACGGTTGTGCGACGTTTGTTTTAACTCGGTAAAGAAACTCAACCGTGAGAAATTTTGTAACGACCTAACCCATTAGACTTTTCCTTTTGGGTTTCCCCTTAAGATTGTTAAAATGCTGTTTGCTAGGGAGAGTTTTCCGTTTCCCTCTCCAAATTTGAATGTTTTCTAAAACATTTCTTGCGAATGTGACTTGAAGCTCAAATATACGTTGTCCGCGTGAGTGAGGAAATACATCTGAAAACGATTTGAAAGAATTGAAGATAACTCTAAACAAATAAAGGAACACTGCAACTTAAATTAGGGTAAGAAGAAGTGTCAATTAGTCAAATCTCTTATGGTATATTTTGGACCATTTTAGCCCCAGCGGGTGTAGACATGAGTTTGGTGAACGATCAGCATGTAAGAGGGGTTTGGAACGAGTATGCGGACAAGCATGATCGGGACTTGAGCAGATGCAATACGTCCTAGACAAGCATGACCAGGACATCCGGCGAGGACAATTTGACACTTGGGATCCTTGGATCTCTACAGACAAAGGTTTTGCCATTTTGAACTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATATATATATATATATATATATATATATATATATATTAATAAAACTTTTTGAAATTTAAGGAACTTTAAAAAAAATAAAAAATAAAATAATAATAATATATATATATATTAATAAAACTTTTTGAAATTTAAGGGTTTATTATTTTAGCTCATTTTTTTAAGTTTTTTTTTTAAAAAAATTATTATTACTTGAAACAAAAACCATTTACCAAAAAATAGAAAATAAAAAATAAAAAAGGTAAACCCTATACTGCAATCCACACGTCAACCCATCTTTCTTCGTTCTTTATTTCTCTTTTCCTCTCTTGTATTCTTCTCTGCGTTGCCGTCGCCGACCACCGGCACGCCCCCGCCACCACTCTTTCTTTTCCGTCTCAGGAGGCTATGTTCTTAGCCAAGTTCGATCGAAGAACATTTTTTTTTCAGGCGCAAGAGTTGATTTTGAGGTGAAGACAGAAAATCCCACTAAACTGGTAATTTCCGGAGCTCTGAACTTTCCTTCTGCACATAACATGTTTGTCAAAATGCCATGTCTAAAATTTGTCAAATTTCTCTTGAATTTTCGCTGCAGTTCGGTAAGATTTTGGGCACTTGGTTCAAACTTTAG

mRNA sequence

ATGCAACCTTACAACTTCGAGGTCACATTTAAGGATCCTGATGCTGCCATTAGAGCTTGTCAAAACCCTTCCCCTGTGATCGATGGAAGAAGGGCTAATTGCAATCTTGCTTCCCTTGGTGCTCATAAGCCTCAACATGGTGGTGGTGGAAGATTTAGAGGTCCATCTGGGATTGTGACCCCTCCTGCTTATCATGTTTCTTCATCGTCTTATGTTCATCAGCCCACTTCTCAATATCCATTCCCTCTTTCAGCTTATGGCTATTCTGGATATTCACAAGACAGGATTTATCCAATGAGCTATTATGGTGTTTATGGTGGCCAACAATTTTCTCCTTATTACTCTGCAAACGCGATTCCGGGACCAGCTGGAATGTTTCAAAATCTCTATCCGTATTACGCTCAAAGTAGCCAGGGATACGAGTTCGGAGTCCAGTATCCACACCTAATGCAGTACCCGTATCTTCCTCAGCAGCACGGTTCGACCGGTATCCTATCACTGCCTGTCTCGACCGCAACAGGAACAACCAGTGCAGGTGCAGCAGCAACGACGACGACGACAATGGCAGTTGGAGGATCGGGGCCTCTACAAACTTCTTCTGCGGTAGCAACCGAACCGAATTCTTCCGAGGATTCTCTGGCTTACCATAATATCACCTCTTTTCCTCTTTCCAGACTGTGCGCAAGAGTTGATTTTGAGGTGAAGACAGAAAATCCCACTAAACTGTTCGGTAAGATTTTGGGCACTTGGTTCAAACTTTAG

Coding sequence (CDS)

ATGCAACCTTACAACTTCGAGGTCACATTTAAGGATCCTGATGCTGCCATTAGAGCTTGTCAAAACCCTTCCCCTGTGATCGATGGAAGAAGGGCTAATTGCAATCTTGCTTCCCTTGGTGCTCATAAGCCTCAACATGGTGGTGGTGGAAGATTTAGAGGTCCATCTGGGATTGTGACCCCTCCTGCTTATCATGTTTCTTCATCGTCTTATGTTCATCAGCCCACTTCTCAATATCCATTCCCTCTTTCAGCTTATGGCTATTCTGGATATTCACAAGACAGGATTTATCCAATGAGCTATTATGGTGTTTATGGTGGCCAACAATTTTCTCCTTATTACTCTGCAAACGCGATTCCGGGACCAGCTGGAATGTTTCAAAATCTCTATCCGTATTACGCTCAAAGTAGCCAGGGATACGAGTTCGGAGTCCAGTATCCACACCTAATGCAGTACCCGTATCTTCCTCAGCAGCACGGTTCGACCGGTATCCTATCACTGCCTGTCTCGACCGCAACAGGAACAACCAGTGCAGGTGCAGCAGCAACGACGACGACGACAATGGCAGTTGGAGGATCGGGGCCTCTACAAACTTCTTCTGCGGTAGCAACCGAACCGAATTCTTCCGAGGATTCTCTGGCTTACCATAATATCACCTCTTTTCCTCTTTCCAGACTGTGCGCAAGAGTTGATTTTGAGGTGAAGACAGAAAATCCCACTAAACTGTTCGGTAAGATTTTGGGCACTTGGTTCAAACTTTAG

Protein sequence

MQPYNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANAIPGPAGMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAATTTTTMAVGGSGPLQTSSAVATEPNSSEDSLAYHNITSFPLSRLCARVDFEVKTENPTKLFGKILGTWFKL

Homology

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BLAST of Csor.00g008460 vs. ExPASy Swiss-Prot
Match: Q9M1S3 (Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 5.2e-06
Identity = 58/171 (33.92%), Postives = 71/171 (41.52%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAH--------KPQHG--GGGRFR 63
           Y F VTFKD  AA RAC++ +P+I+GRRANCNLASLG           PQ G   G R  
Sbjct: 60  YGF-VTFKDAKAATRACEDSTPIINGRRANCNLASLGGRLRKSPTMTSPQQGPKNGNRAT 119

Query: 64  GPS-GIVTPPAYHVSSSSYVHQPTSQYPFPLSAYGY-SGYSQDRIYPMSYYGVYGGQQFS 123
            P  G  +   Y    ++  HQ  +    P   YGY S Y    +      G  GG   +
Sbjct: 120 PPHVGNHSQWYYPSGFTNQQHQQQNHQAVPF--YGYPSAYVAPNMTFNQKVGYVGGTYMN 179

Query: 124 PYYSANAIPGPAGMFQNLYPYYAQSSQGYEF----GVQYPHLMQYPYLPQQ 159
            YY A   P P    Q  Y ++     G           P    YPY   Q
Sbjct: 180 GYY-AQMQPQPQSQPQPQYYHHHMYGGGRVMVGAASPMVPFYTVYPYHQSQ 226

[Close]

BLAST of Csor.00g008460 vs. ExPASy Swiss-Prot
Match: Q7T3I7 (RNA-binding protein 38 OS=Xenopus laevis OX=8355 GN=rbm38 PE=1 SV=2)

HSP 1 Score: 47.0 bits (110), Expect = 3.7e-04
Identity = 54/177 (30.51%), Postives = 74/177 (41.81%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 63
           Y F VT  D  AA RAC++P+P+IDGR+AN NLA LGA KP++                A
Sbjct: 54  YGF-VTMSDRAAAERACKDPNPIIDGRKANVNLAYLGA-KPRN-------------LQSA 113

Query: 64  YHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANAIPGPA 123
           + +     +H    Q PF        G +   IYP +               +  IP P 
Sbjct: 114 FTIGVQQ-LHPAFIQRPF--------GLTPQYIYPPTI-----------VQPSMVIPTPI 173

Query: 124 GMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQ------HGSTGILSLPVSTATG 175
              Q+ Y  Y  ++Q Y       +  QYPY          +G T  +  P+ST TG
Sbjct: 174 PSLQSPYIDYNAATQAYTHYTTAAY-EQYPYAASPATGYMGYGYTSPVQQPLSTTTG 194

[Close]

BLAST of Csor.00g008460 vs. NCBI nr
Match: KAG6592947.1 (putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 509 bits (1311), Expect = 5.40e-182
Identity = 253/253 (100.00%), Postives = 253/253 (100.00%), Query Frame = 0


Query: 1   MQPYNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVT 60
           MQPYNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVT
Sbjct: 1   MQPYNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVT 60

Query: 61  PPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANAIP 120
           PPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANAIP
Sbjct: 61  PPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANAIP 120

Query: 121 GPAGMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGA 180
           GPAGMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGA
Sbjct: 121 GPAGMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGA 180

Query: 181 AATTTTTMAVGGSGPLQTSSAVATEPNSSEDSLAYHNITSFPLSRLCARVDFEVKTENPT 240
           AATTTTTMAVGGSGPLQTSSAVATEPNSSEDSLAYHNITSFPLSRLCARVDFEVKTENPT
Sbjct: 181 AATTTTTMAVGGSGPLQTSSAVATEPNSSEDSLAYHNITSFPLSRLCARVDFEVKTENPT 240

Query: 241 KLFGKILGTWFKL 253
           KLFGKILGTWFKL
Sbjct: 241 KLFGKILGTWFKL 253

[Close]

BLAST of Csor.00g008460 vs. NCBI nr
Match: KAG7025354.1 (putative RNA-binding protein ARP1 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 403 bits (1035), Expect = 1.41e-139
Identity = 204/207 (98.55%), Postives = 205/207 (99.03%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 63
           Y F VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA
Sbjct: 66  YGF-VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 125

Query: 64  YHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANAIPGPA 123
           YHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPM+YYGVYGGQQFSPYYSANAIPGPA
Sbjct: 126 YHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPA 185

Query: 124 GMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT 183
           GMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT
Sbjct: 186 GMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT 245

Query: 184 TTTTMAVGGSGPLQTSSAVATEPNSSE 210
           TTTTMAVGGSGPLQTSSAVATEPNSSE
Sbjct: 246 TTTTMAVGGSGPLQTSSAVATEPNSSE 271

[Close]

BLAST of Csor.00g008460 vs. NCBI nr
Match: XP_022960509.1 (RNA-binding protein 24 isoform X1 [Cucurbita moschata])

HSP 1 Score: 400 bits (1027), Expect = 2.33e-138
Identity = 202/207 (97.58%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 63
           Y F VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA
Sbjct: 66  YGF-VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 125

Query: 64  YHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANAIPGPA 123
           YHVSSSSYVHQPT+QYPFPLSAYGYSGYSQDRIYPM+YYGVYGGQQFSPYYSANAIPGPA
Sbjct: 126 YHVSSSSYVHQPTTQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPA 185

Query: 124 GMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT 183
           GMFQNLYPYYAQSS GYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT
Sbjct: 186 GMFQNLYPYYAQSSHGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT 245

Query: 184 TTTTMAVGGSGPLQTSSAVATEPNSSE 210
           TTTTMAVGGSGPLQTSSAVATEPNSSE
Sbjct: 246 TTTTMAVGGSGPLQTSSAVATEPNSSE 271

[Close]

BLAST of Csor.00g008460 vs. NCBI nr
Match: XP_022960510.1 (RNA-binding protein 24 isoform X2 [Cucurbita moschata])

HSP 1 Score: 394 bits (1012), Expect = 4.33e-136
Identity = 201/207 (97.10%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 63
           Y F VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA
Sbjct: 66  YGF-VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 125

Query: 64  YHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANAIPGPA 123
           YHVSSSSYVHQPT+QYPFPLSAYGYSGYSQDRIYPM+YYGVYGGQQFSPYYSANAIPGPA
Sbjct: 126 YHVSSSSYVHQPTTQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPA 185

Query: 124 GMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT 183
           GMFQNLYPYYAQSS GYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAA T
Sbjct: 186 GMFQNLYPYYAQSSHGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAA-T 245

Query: 184 TTTTMAVGGSGPLQTSSAVATEPNSSE 210
           TTTTMAVGGSGPLQTSSAVATEPNSSE
Sbjct: 246 TTTTMAVGGSGPLQTSSAVATEPNSSE 270

[Close]

BLAST of Csor.00g008460 vs. NCBI nr
Match: XP_023513417.1 (RNA-binding protein 38 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 391 bits (1004), Expect = 7.95e-135
Identity = 201/209 (96.17%), Postives = 202/209 (96.65%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 63
           Y F VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA
Sbjct: 66  YGF-VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 125

Query: 64  YHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANAIPGPA 123
           YHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPM+YYGVYGGQQFSPYYSANAIPGPA
Sbjct: 126 YHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPA 185

Query: 124 GMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT 183
           GMFQNL PYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTA GTTSAGAA T
Sbjct: 186 GMFQNLCPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTAAGTTSAGAATT 245

Query: 184 --TTTTMAVGGSGPLQTSSAVATEPNSSE 210
             TTTTMAVGGSGPLQTSSAVATEPNSSE
Sbjct: 246 MTTTTTMAVGGSGPLQTSSAVATEPNSSE 273

[Close]

BLAST of Csor.00g008460 vs. ExPASy TrEMBL
Match: A0A6J1HB82 (RNA-binding protein 24 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461225 PE=4 SV=1)

HSP 1 Score: 400 bits (1027), Expect = 1.13e-138
Identity = 202/207 (97.58%), Postives = 204/207 (98.55%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 63
           Y F VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA
Sbjct: 66  YGF-VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 125

Query: 64  YHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANAIPGPA 123
           YHVSSSSYVHQPT+QYPFPLSAYGYSGYSQDRIYPM+YYGVYGGQQFSPYYSANAIPGPA
Sbjct: 126 YHVSSSSYVHQPTTQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPA 185

Query: 124 GMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT 183
           GMFQNLYPYYAQSS GYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT
Sbjct: 186 GMFQNLYPYYAQSSHGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT 245

Query: 184 TTTTMAVGGSGPLQTSSAVATEPNSSE 210
           TTTTMAVGGSGPLQTSSAVATEPNSSE
Sbjct: 246 TTTTMAVGGSGPLQTSSAVATEPNSSE 271

[Close]

BLAST of Csor.00g008460 vs. ExPASy TrEMBL
Match: A0A6J1H998 (RNA-binding protein 24 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461225 PE=4 SV=1)

HSP 1 Score: 394 bits (1012), Expect = 2.10e-136
Identity = 201/207 (97.10%), Postives = 203/207 (98.07%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 63
           Y F VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA
Sbjct: 66  YGF-VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 125

Query: 64  YHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANAIPGPA 123
           YHVSSSSYVHQPT+QYPFPLSAYGYSGYSQDRIYPM+YYGVYGGQQFSPYYSANAIPGPA
Sbjct: 126 YHVSSSSYVHQPTTQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANAIPGPA 185

Query: 124 GMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT 183
           GMFQNLYPYYAQSS GYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAA T
Sbjct: 186 GMFQNLYPYYAQSSHGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAA-T 245

Query: 184 TTTTMAVGGSGPLQTSSAVATEPNSSE 210
           TTTTMAVGGSGPLQTSSAVATEPNSSE
Sbjct: 246 TTTTMAVGGSGPLQTSSAVATEPNSSE 270

[Close]

BLAST of Csor.00g008460 vs. ExPASy TrEMBL
Match: A0A6J1KX91 (RNA-binding protein 38 OS=Cucurbita maxima OX=3661 GN=LOC111497969 PE=4 SV=1)

HSP 1 Score: 384 bits (986), Expect = 1.90e-132
Identity = 196/207 (94.69%), Postives = 199/207 (96.14%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRFRGPSGIVTPPA 63
           Y F VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGR RGPSGIV PPA
Sbjct: 66  YGF-VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQHGGGGRSRGPSGIVNPPA 125

Query: 64  YHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANAIPGPA 123
           YHVSSSSYVHQPT+QYPFPLSAYGYSGYSQDRIYPM+YYGVYGGQQFSPYYSAN IPGPA
Sbjct: 126 YHVSSSSYVHQPTTQYPFPLSAYGYSGYSQDRIYPMNYYGVYGGQQFSPYYSANVIPGPA 185

Query: 124 GMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSAGAAAT 183
           GMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQH STGILSLPVSTATGTTSAGA  T
Sbjct: 186 GMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHSSTGILSLPVSTATGTTSAGAT-T 245

Query: 184 TTTTMAVGGSGPLQTSSAVATEPNSSE 210
           +TTTMAVGGSGPLQTSSAVATEPNSSE
Sbjct: 246 STTTMAVGGSGPLQTSSAVATEPNSSE 270

[Close]

BLAST of Csor.00g008460 vs. ExPASy TrEMBL
Match: A0A1S3CBZ0 (RNA-binding protein 24-B OS=Cucumis melo OX=3656 GN=LOC103498947 PE=4 SV=1)

HSP 1 Score: 340 bits (871), Expect = 8.67e-115
Identity = 175/212 (82.55%), Postives = 187/212 (88.21%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKP-----QHGGGGRFRGPSGI 63
           Y F VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKP     QHG GGRFRG SGI
Sbjct: 74  YGF-VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPHPPTPQHGVGGRFRGASGI 133

Query: 64  VTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANA 123
           VTPPAYHVSSSSY+HQPTSQY FPLS YG++GYSQDRIYP++YYGVYGGQQFSPYYSAN 
Sbjct: 134 VTPPAYHVSSSSYIHQPTSQYSFPLSGYGFAGYSQDRIYPLNYYGVYGGQQFSPYYSANG 193

Query: 124 IPGPAGMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSA 183
           + GPAGMFQNLYPYYAQSSQGY FG+QYPHLMQYPYLPQQHGSTGILSLP S A GTT++
Sbjct: 194 LSGPAGMFQNLYPYYAQSSQGYGFGIQYPHLMQYPYLPQQHGSTGILSLPGSNALGTTTS 253

Query: 184 GAAATTTTTMAVGGSGPLQTSSAVATEPNSSE 210
           G  AT+TT +   GSGP Q SSAVA+EPNSSE
Sbjct: 254 GTTATSTTAV---GSGPSQASSAVASEPNSSE 281

[Close]

BLAST of Csor.00g008460 vs. ExPASy TrEMBL
Match: A0A0A0K998 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087740 PE=4 SV=1)

HSP 1 Score: 334 bits (856), Expect = 1.65e-112
Identity = 173/212 (81.60%), Postives = 184/212 (86.79%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKP-----QHGGGGRFRGPSGI 63
           Y F VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKP     QHG GGRFRG SGI
Sbjct: 74  YGF-VTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPHPPTPQHGVGGRFRGASGI 133

Query: 64  VTPPAYHVSSSSYVHQPTSQYPFPLSAYGYSGYSQDRIYPMSYYGVYGGQQFSPYYSANA 123
           VTPPAYHVSSSSY+HQPTSQY FPLS YG++GYSQDRIYP++YYGVYGGQQFSPYYSAN 
Sbjct: 134 VTPPAYHVSSSSYIHQPTSQYSFPLSGYGFAGYSQDRIYPLNYYGVYGGQQFSPYYSANG 193

Query: 124 IPGPAGMFQNLYPYYAQSSQGYEFGVQYPHLMQYPYLPQQHGSTGILSLPVSTATGTTSA 183
           + GPAGMFQNLYPYYAQSSQGY FG+QYPHLMQYPYLPQQH STGILSLP S A GTT++
Sbjct: 194 LSGPAGMFQNLYPYYAQSSQGYGFGMQYPHLMQYPYLPQQHSSTGILSLPGSNALGTTTS 253

Query: 184 GAAATTTTTMAVGGSGPLQTSSAVATEPNSSE 210
           G  ATT T +   GSGP Q S AVA+EPNSSE
Sbjct: 254 GTTATTITAV---GSGPSQASPAVASEPNSSE 281

[Close]

BLAST of Csor.00g008460 vs. TAIR 10
Match: AT2G46780.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 151.0 bits (380), Expect = 1.3e-36
Identity = 112/237 (47.26%), Postives = 137/237 (57.81%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKPQ-----HGGGGRFRGPS-- 63
           Y F VTFK+ +AA+RACQN +PVIDGRRANCNLA LGA KP+       G GRFR P   
Sbjct: 65  YGF-VTFKEAEAAMRACQNMNPVIDGRRANCNLACLGAQKPRPPTSPRHGTGRFRSPGSG 124

Query: 64  -GIVTP-PAYHVSSSS--YVHQP----TSQYPFPLSAYGYSGYSQDRIYPMSYYG--VYG 123
            G+V P P +  SSSS  +VHQ     T+Q+PFP S YG+SGYSQ+ +YPM+YY   +YG
Sbjct: 125 VGLVAPSPQFRGSSSSSAFVHQQQQQHTAQFPFPYSTYGFSGYSQEGMYPMNYYNHHLYG 184

Query: 124 GQQFSPYYSANAIPGPAGMFQNLYPYY-----------------AQSSQGYEFGVQY--- 183
           GQQFSP Y  +   G  GMF   YPYY                 AQ  QG+ F  QY   
Sbjct: 185 GQQFSP-YMGHPSAGSTGMFHGFYPYYPQYNAAQSSNQAQAQVQAQHHQGFSF--QYTAP 244

Query: 184 --PHLMQYPYLPQQ-HGST-----------GILSLPVSTATGTTSAGAAATTTTTMA 190
             P L+QYPYLP Q H S+            ILSLP S A    S+ + +++T+T A
Sbjct: 245 PAPPLLQYPYLPHQPHFSSQQQFSSQQPPPPILSLPTSLALSLPSSSSPSSSTSTSA 297

[Close]

BLAST of Csor.00g008460 vs. TAIR 10
Match: AT1G20880.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.3e-16
Identity = 61/158 (38.61%), Postives = 77/158 (48.73%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKP--QHG----GGGRFRGPS- 63
           Y F VTF+DP+AA RAC +P+P+IDGRRANCNLASLG  +P  Q+       GR R PS 
Sbjct: 67  YGF-VTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSRPPMQYAVIPHAPGRVRPPSP 126

Query: 64  ---GIVTPPAYHVSSSSYVHQPTSQY-PFPLSAYGYSGYSQDRIYPMS--YYGVYGGQQF 123
               + +P   H  S  Y   PT  Y    +  YG + Y  D +Y  S  +YG Y GQQ+
Sbjct: 127 YVGSVQSPRGLHFGSHPYHQPPTYNYQQGVVYPYGVTPYGPDYMYSQSQGFYGPYMGQQY 186

Query: 124 SPYYSANAIPGPAGMFQNLYPYYAQSSQGYEFGVQYPH 149
              Y         G       +    + GY  G  Y H
Sbjct: 187 LQVYGVPGAVNSPGYQYGQLSHTIPGAHGYTAGQGYSH 223

[Close]

BLAST of Csor.00g008460 vs. TAIR 10
Match: AT1G20880.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 83.2 bits (204), Expect = 3.3e-16
Identity = 61/158 (38.61%), Postives = 77/158 (48.73%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHKP--QHG----GGGRFRGPS- 63
           Y F VTF+DP+AA RAC +P+P+IDGRRANCNLASLG  +P  Q+       GR R PS 
Sbjct: 67  YGF-VTFRDPEAARRACVDPTPIIDGRRANCNLASLGRSRPPMQYAVIPHAPGRVRPPSP 126

Query: 64  ---GIVTPPAYHVSSSSYVHQPTSQY-PFPLSAYGYSGYSQDRIYPMS--YYGVYGGQQF 123
               + +P   H  S  Y   PT  Y    +  YG + Y  D +Y  S  +YG Y GQQ+
Sbjct: 127 YVGSVQSPRGLHFGSHPYHQPPTYNYQQGVVYPYGVTPYGPDYMYSQSQGFYGPYMGQQY 186

Query: 124 SPYYSANAIPGPAGMFQNLYPYYAQSSQGYEFGVQYPH 149
              Y         G       +    + GY  G  Y H
Sbjct: 187 LQVYGVPGAVNSPGYQYGQLSHTIPGAHGYTAGQGYSH 223

[Close]

BLAST of Csor.00g008460 vs. TAIR 10
Match: AT1G33470.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 79.7 bits (195), Expect = 3.7e-15
Identity = 59/141 (41.84%), Postives = 75/141 (53.19%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHK-----PQHGG-GGRFRGPSG 63
           Y F VTF DP+AA +AC +P+PVIDGRRANCNLA+ G  +     P HG  GGR      
Sbjct: 50  YGF-VTFCDPEAAQKACVDPAPVIDGRRANCNLAAFGVQRSKPSSPIHGHVGGR---GMK 109

Query: 64  IVTPPAYHVSSSSYV---HQPTSQYPFP-LSAYGYSGYSQDRIYPMSYYGVYGGQQFS-P 123
           + +P   H  +++       P S Y  P  + +G+S YS D  YP SYY VYGG     P
Sbjct: 110 VTSPFKTHFGTAATAIPSPLPFSHYTLPYTNPFGFSSYSMDYNYPTSYYNVYGGATAQHP 169

Query: 124 YYSANAIPG-PAGMFQNLYPY 133
            Y +  + G  A      YPY
Sbjct: 170 MYGSGPMTGVAAAPAAGFYPY 186

[Close]

BLAST of Csor.00g008460 vs. TAIR 10
Match: AT1G22910.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 76.6 bits (187), Expect = 3.1e-14
Identity = 66/184 (35.87%), Postives = 87/184 (47.28%), Query Frame = 0


Query: 4   YNFEVTFKDPDAAIRACQNPSPVIDGRRANCNLASLGAHK-----PQHGGGGRFRGPSGI 63
           Y F VTF++ +AA  AC + +PVIDGRRANCNLASLG  +     P HGGGGR      +
Sbjct: 56  YGF-VTFREAEAARSACVDATPVIDGRRANCNLASLGLQRSKPSTPNHGGGGRINNMRVM 115

Query: 64  VTPPAYHVSSSSYVHQPT-SQYP-FPLSAYGYSGYSQD-RIYPMSYYGVYG---GQQFSP 123
           ++              PT + YP  PL+ +GYS YS D   +P + YG+YG   G Q+  
Sbjct: 116 MSTMQTGFGPPPPPQPPTFTHYPHLPLNLFGYSPYSPDYSSFPTNLYGMYGCTSGGQYGV 175

Query: 124 YYSANA----IPGPAGMFQNLYP--------YYAQSSQGYEFGVQY-PHLMQYPYLPQQH 164
           Y + N+    +   A      YP         ++Q    Y     Y PH    P    Q 
Sbjct: 176 YGNRNSGGGGLTAAAASATPFYPCGGGHGGVQFSQPQPFYHHLSSYNPHHYSPPTFSMQQ 235

The following BLAST results are available for this feature:

BLAST of Csor.00g008460 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M1S3	5.2e-06	33.92	Probable RNA-binding protein ARP1 OS=Arabidopsis thaliana OX=3702 GN=ARP1 PE=2 S...	[more]
Q7T3I7	3.7e-04	30.51	RNA-binding protein 38 OS=Xenopus laevis OX=8355 GN=rbm38 PE=1 SV=2	[more]

BLAST of Csor.00g008460 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6592947.1	5.40e-182	100.00	putative RNA-binding protein ARP1, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7025354.1	1.41e-139	98.55	putative RNA-binding protein ARP1 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022960509.1	2.33e-138	97.58	RNA-binding protein 24 isoform X1 [Cucurbita moschata]	[more]
XP_022960510.1	4.33e-136	97.10	RNA-binding protein 24 isoform X2 [Cucurbita moschata]	[more]
XP_023513417.1	7.95e-135	96.17	RNA-binding protein 38 [Cucurbita pepo subsp. pepo]	[more]

BLAST of Csor.00g008460 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1HB82	1.13e-138	97.58	RNA-binding protein 24 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111461225 ...	[more]
A0A6J1H998	2.10e-136	97.10	RNA-binding protein 24 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461225 ...	[more]
A0A6J1KX91	1.90e-132	94.69	RNA-binding protein 38 OS=Cucurbita maxima OX=3661 GN=LOC111497969 PE=4 SV=1	[more]
A0A1S3CBZ0	8.67e-115	82.55	RNA-binding protein 24-B OS=Cucumis melo OX=3656 GN=LOC103498947 PE=4 SV=1	[more]
A0A0A0K998	1.65e-112	81.60	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G087740 PE=4 SV...	[more]

BLAST of Csor.00g008460 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G46780.1	1.3e-36	47.26	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G20880.1	3.3e-16	38.61	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G20880.2	3.3e-16	38.61	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G33470.2	3.7e-15	41.84	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT1G22910.1	3.1e-14	35.87	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR11176:SF33	SUBFAMILY NOT NAMED	coord: 4..202
IPR037366	BOULE/DAZ family	PANTHER	PTHR11176	BOULE-RELATED	coord: 4..202

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g008460.m01	Csor.00g008460.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030154	cell differentiation
molecular_function	GO:0003729	mRNA binding