Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSsinglestart_codonpolypeptidestop_codon
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGCTGCTCAGAAGCTCTTCTACGCCGCTTCTTCGCTCTCTTCTCCCGCCGGACCACCTCCATCACCACCATGATGCCGTCGGGAAACACTCCCCTTCCCCCTCCCATTCCCCCTTCGCCTTTCGCTGTAACAATAAACCCCTTTCTTTCTCCGACCACCATCGCGCTGCTCCCACTGGCTTTCGGAGAACCCACTCCGAAGGAAATTTGATTACCCTTTCTCATGCTTCTGATGTAATCGATGTCCATGAAGACCCTTTTTCATTTGATTCATTCAATTTCAAACCCTCCAATAAACTCAGTCACAGGCCTAACCGGTCCGTTCTCGAGACCATACCTTCGTTTTCCTTCTACGGTTCCAGAGCCAGGACTGAAGAAGAAGATGACGAAGACGATGATCAACATGCTGATCCGGAGGAAGATGAAGTTGCCTTGGAGAATTTTGGCGTCCATAACAGGATGGACGCTGCCATTGTAACTCCGGGGGTTAGGGCCATGGAACAAGCTTGGACCAGAATGAATTCAGGAGATGGGATTGGGTTTGTGGGTGATTTACAGAAAGAGATGCATCTGGCGAGAGGGCCAGGTGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTCGACGGCGGAGTGGCGGAGGTGGAGGGGGTGAGCAGCATGGCATGGAGGAGTATTACAAGAAAATGGTAGTGGAAAATCCAGGGAATGCTCTGGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGGCAAGATCTAAGCTTGTTTAA
mRNA sequence
ATGCTGCTCAGAAGCTCTTCTACGCCGCTTCTTCGCTCTCTTCTCCCGCCGGACCACCTCCATCACCACCATGATGCCGTCGGGAAACACTCCCCTTCCCCCTCCCATTCCCCCTTCGCCTTTCGCTGTAACAATAAACCCCTTTCTTTCTCCGACCACCATCGCGCTGCTCCCACTGGCTTTCGGAGAACCCACTCCGAAGGAAATTTGATTACCCTTTCTCATGCTTCTGATGTAATCGATGTCCATGAAGACCCTTTTTCATTTGATTCATTCAATTTCAAACCCTCCAATAAACTCAGTCACAGGCCTAACCGGTCCGTTCTCGAGACCATACCTTCGTTTTCCTTCTACGGTTCCAGAGCCAGGACTGAAGAAGAAGATGACGAAGACGATGATCAACATGCTGATCCGGAGGAAGATGAAGTTGCCTTGGAGAATTTTGGCGTCCATAACAGGATGGACGCTGCCATTGTAACTCCGGGGGTTAGGGCCATGGAACAAGCTTGGACCAGAATGAATTCAGGAGATGGGATTGGGTTTGTGGGTGATTTACAGAAAGAGATGCATCTGGCGAGAGGGCCAGGTGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTCGACGGCGGAGTGGCGGAGGTGGAGGGGGTGAGCAGCATGGCATGGAGGAGTATTACAAGAAAATGGTAGTGGAAAATCCAGGGAATGCTCTGGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGGCAAGATCTAAGCTTGTTTAA
Coding sequence (CDS)
ATGCTGCTCAGAAGCTCTTCTACGCCGCTTCTTCGCTCTCTTCTCCCGCCGGACCACCTCCATCACCACCATGATGCCGTCGGGAAACACTCCCCTTCCCCCTCCCATTCCCCCTTCGCCTTTCGCTGTAACAATAAACCCCTTTCTTTCTCCGACCACCATCGCGCTGCTCCCACTGGCTTTCGGAGAACCCACTCCGAAGGAAATTTGATTACCCTTTCTCATGCTTCTGATGTAATCGATGTCCATGAAGACCCTTTTTCATTTGATTCATTCAATTTCAAACCCTCCAATAAACTCAGTCACAGGCCTAACCGGTCCGTTCTCGAGACCATACCTTCGTTTTCCTTCTACGGTTCCAGAGCCAGGACTGAAGAAGAAGATGACGAAGACGATGATCAACATGCTGATCCGGAGGAAGATGAAGTTGCCTTGGAGAATTTTGGCGTCCATAACAGGATGGACGCTGCCATTGTAACTCCGGGGGTTAGGGCCATGGAACAAGCTTGGACCAGAATGAATTCAGGAGATGGGATTGGGTTTGTGGGTGATTTACAGAAAGAGATGCATCTGGCGAGAGGGCCAGGTGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTCGACGGCGGAGTGGCGGAGGTGGAGGGGGTGAGCAGCATGGCATGGAGGAGTATTACAAGAAAATGGTAGTGGAAAATCCAGGGAATGCTCTGGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGGCAAGATCTAAGCTTGTTTAA
Protein sequence
MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLV
Homology
BLAST of Csor.00g001630 vs. NCBI nr
Match:
KAG6576080.1 (hypothetical protein SDJN03_26719, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 501 bits (1289), Expect = 1.32e-178
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0
Query: 1 MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTG 60
MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTG
Sbjct: 1 MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTG 60
Query: 61 FRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGS 120
FRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGS
Sbjct: 61 FRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGS 120
Query: 121 RARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIG 180
RARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIG
Sbjct: 121 RARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIG 180
Query: 181 FVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLS 240
FVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLS
Sbjct: 181 FVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLS 240
Query: 241 NYAEFLYQARSKLV 254
NYAEFLYQARSKLV
Sbjct: 241 NYAEFLYQARSKLV 254
BLAST of Csor.00g001630 vs. NCBI nr
Match:
KAG7014598.1 (hypothetical protein SDJN02_24777, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 495 bits (1275), Expect = 5.89e-175
Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 0
Query: 1 MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTG 60
MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHS FAFRCNNKPLSFSDHHRAAPTG
Sbjct: 1 MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPLSFSDHHRAAPTG 60
Query: 61 FRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGS 120
FRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGS
Sbjct: 61 FRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGS 120
Query: 121 RARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIG 180
RARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIG
Sbjct: 121 RARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIG 180
Query: 181 FVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLS 240
FVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLS
Sbjct: 181 FVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLS 240
Query: 241 NYAEFLYQARSKL 253
NYAEFLYQARSKL
Sbjct: 241 NYAEFLYQARSKL 253
BLAST of Csor.00g001630 vs. NCBI nr
Match:
XP_038874351.1 (uncharacterized protein LOC120067050 isoform X2 [Benincasa hispida])
HSP 1 Score: 328 bits (840), Expect = 2.23e-109
Identity = 196/266 (73.68%), Postives = 205/266 (77.07%), Query Frame = 0
Query: 1 MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSD-------- 60
MLL+SSSTPLL SLLPPDH HHD V KHS SPS PFAF CNNK LSFS
Sbjct: 1 MLLKSSSTPLLSSLLPPDH---HHDTVRKHSSSPSPPPFAFHCNNKTLSFSTIASLNSSP 60
Query: 61 HHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETI 120
A PTGFRRTHSEGNL TLSHA DVIDVHEDPFSFDSFNFKPSN SH RS+L+TI
Sbjct: 61 SFSATPTGFRRTHSEGNLNTLSHAPDVIDVHEDPFSFDSFNFKPSN--SHSLKRSLLQTI 120
Query: 121 PSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRM--DAAIVTPGVRAMEQAW 180
PSFSFY SRARTEE+DD DDDQH DPEEDE L +FG+ NRM DAAIVTP V+AME AW
Sbjct: 121 PSFSFYTSRARTEEDDD-DDDQHTDPEEDEDGLGSFGIQNRMVTDAAIVTPEVKAMEHAW 180
Query: 181 TRMNSGDGIGFVGDLQKEMHLARGPG-GGGGGGGGGGRRRSGGGGGG--EQHGMEEYYKK 240
T DGIGFVGD QKEM+L G GG G GGGGGRR SGGGGGG EQHGMEEYYKK
Sbjct: 181 T-----DGIGFVGDSQKEMYLTSELGIGGQGDGGGGGRRWSGGGGGGGGEQHGMEEYYKK 240
Query: 241 MVVENPGNALVLSNYAEFLYQARSKL 253
MV+ENPGNALVLSNYAEFLYQ R L
Sbjct: 241 MVMENPGNALVLSNYAEFLYQRRGDL 255
BLAST of Csor.00g001630 vs. NCBI nr
Match:
XP_038874350.1 (uncharacterized protein LOC120067050 isoform X1 [Benincasa hispida])
HSP 1 Score: 328 bits (840), Expect = 7.40e-109
Identity = 196/266 (73.68%), Postives = 205/266 (77.07%), Query Frame = 0
Query: 1 MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSD-------- 60
MLL+SSSTPLL SLLPPDH HHD V KHS SPS PFAF CNNK LSFS
Sbjct: 1 MLLKSSSTPLLSSLLPPDH---HHDTVRKHSSSPSPPPFAFHCNNKTLSFSTIASLNSSP 60
Query: 61 HHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETI 120
A PTGFRRTHSEGNL TLSHA DVIDVHEDPFSFDSFNFKPSN SH RS+L+TI
Sbjct: 61 SFSATPTGFRRTHSEGNLNTLSHAPDVIDVHEDPFSFDSFNFKPSN--SHSLKRSLLQTI 120
Query: 121 PSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRM--DAAIVTPGVRAMEQAW 180
PSFSFY SRARTEE+DD DDDQH DPEEDE L +FG+ NRM DAAIVTP V+AME AW
Sbjct: 121 PSFSFYTSRARTEEDDD-DDDQHTDPEEDEDGLGSFGIQNRMVTDAAIVTPEVKAMEHAW 180
Query: 181 TRMNSGDGIGFVGDLQKEMHLARGPG-GGGGGGGGGGRRRSGGGGGG--EQHGMEEYYKK 240
T DGIGFVGD QKEM+L G GG G GGGGGRR SGGGGGG EQHGMEEYYKK
Sbjct: 181 T-----DGIGFVGDSQKEMYLTSELGIGGQGDGGGGGRRWSGGGGGGGGEQHGMEEYYKK 240
Query: 241 MVVENPGNALVLSNYAEFLYQARSKL 253
MV+ENPGNALVLSNYAEFLYQ R L
Sbjct: 241 MVMENPGNALVLSNYAEFLYQRRGDL 255
BLAST of Csor.00g001630 vs. NCBI nr
Match:
XP_008459965.1 (PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo])
HSP 1 Score: 319 bits (818), Expect = 2.02e-105
Identity = 185/272 (68.01%), Postives = 213/272 (78.31%), Query Frame = 0
Query: 1 MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFS--------- 60
MLL+SSSTPLL SLLPPDH HHH+D VGKHSPS F F CNNKPLSFS
Sbjct: 1 MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPS----TFPFHCNNKPLSFSTTTASLNSS 60
Query: 61 ----DHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNR 120
DHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDPFS DS NFK SNK S R
Sbjct: 61 PSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKR 120
Query: 121 SVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAM 180
SVL+TIPSFSFYGSR RTEE+++E++D+ D EE+E L NFG++ AA++TP VRAM
Sbjct: 121 SVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGIN----AAVITPEVRAM 180
Query: 181 EQAWTRMNSG-DGIGFVGDLQKEMHLARGPG--GGGGGGGGGGRRRSGGGGGG--EQHGM 240
EQAW+R+ +G DGIGFVGDL+KEM+LARG G GG G GGGGGR +GGGGGG E++GM
Sbjct: 181 EQAWSRVGAGGDGIGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGM 240
Query: 241 EEYYKKMVVENPGNALVLSNYAEFLYQARSKL 253
EEYYKKMVVENPGNALVLSNYAEFLY+ + L
Sbjct: 241 EEYYKKMVVENPGNALVLSNYAEFLYKRKGDL 264
BLAST of Csor.00g001630 vs. ExPASy TrEMBL
Match:
A0A1S3CCM7 (uncharacterized protein LOC103498923 OS=Cucumis melo OX=3656 GN=LOC103498923 PE=4 SV=1)
HSP 1 Score: 319 bits (818), Expect = 9.78e-106
Identity = 185/272 (68.01%), Postives = 213/272 (78.31%), Query Frame = 0
Query: 1 MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFS--------- 60
MLL+SSSTPLL SLLPPDH HHH+D VGKHSPS F F CNNKPLSFS
Sbjct: 1 MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPS----TFPFHCNNKPLSFSTTTASLNSS 60
Query: 61 ----DHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNR 120
DHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDPFS DS NFK SNK S R
Sbjct: 61 PSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKR 120
Query: 121 SVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAM 180
SVL+TIPSFSFYGSR RTEE+++E++D+ D EE+E L NFG++ AA++TP VRAM
Sbjct: 121 SVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGIN----AAVITPEVRAM 180
Query: 181 EQAWTRMNSG-DGIGFVGDLQKEMHLARGPG--GGGGGGGGGGRRRSGGGGGG--EQHGM 240
EQAW+R+ +G DGIGFVGDL+KEM+LARG G GG G GGGGGR +GGGGGG E++GM
Sbjct: 181 EQAWSRVGAGGDGIGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGM 240
Query: 241 EEYYKKMVVENPGNALVLSNYAEFLYQARSKL 253
EEYYKKMVVENPGNALVLSNYAEFLY+ + L
Sbjct: 241 EEYYKKMVVENPGNALVLSNYAEFLYKRKGDL 264
BLAST of Csor.00g001630 vs. ExPASy TrEMBL
Match:
A0A5A7TE10 (TPR_11 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001580 PE=4 SV=1)
HSP 1 Score: 316 bits (810), Expect = 2.07e-104
Identity = 183/268 (68.28%), Postives = 211/268 (78.73%), Query Frame = 0
Query: 1 MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFS--------- 60
MLL+SSSTPLL SLLPPDH HHH+D VGKHSPS F F CNNKPLSFS
Sbjct: 1 MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPS----TFPFHCNNKPLSFSTTTASLNSS 60
Query: 61 ----DHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNR 120
DHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDPFS DS NFK SNK S R
Sbjct: 61 PSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKR 120
Query: 121 SVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAM 180
S+L+TIPSFSFYGSR RTEE+++E++D+ D EE+E L NFG++ AA++TP VRAM
Sbjct: 121 SILQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGIN----AAVITPEVRAM 180
Query: 181 EQAWTRMNSG-DGIGFVGDLQKEMHLARGPG--GGGGGGGGGGRRRSGGGGGG--EQHGM 240
EQAW+R+ +G DG+GF GDL+KEM+LARG G GG G GGGGGR SGGGGGG E++GM
Sbjct: 181 EQAWSRVGAGGDGMGFGGDLRKEMYLARGLGIGGGPGDGGGGGRLHSGGGGGGGGEEYGM 240
Query: 241 EEYYKKMVVENPGNALVLSNYAEFLYQA 249
EEYYKKMVVENPGNALVLSNYAEFLY+A
Sbjct: 241 EEYYKKMVVENPGNALVLSNYAEFLYKA 260
BLAST of Csor.00g001630 vs. ExPASy TrEMBL
Match:
A0A0A0KA70 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G088010 PE=4 SV=1)
HSP 1 Score: 311 bits (796), Expect = 9.99e-103
Identity = 186/272 (68.38%), Postives = 209/272 (76.84%), Query Frame = 0
Query: 1 MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFS--------- 60
MLL+SSSTPLL SLLPPDH HHHD GKHSPS F F CNNKPLSFS
Sbjct: 1 MLLKSSSTPLLGSLLPPDH--HHHDLHGKHSPS----TFPFHCNNKPLSFSTTTASLSSS 60
Query: 61 ----DHHRAA-PTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNR 120
DHHRAA P+GFRRT+SEGNL T+SHASDVIDVHEDPFSFDS NFK S K H R
Sbjct: 61 PAFSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKR 120
Query: 121 SVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAM 180
S+L+TIPSFSFYGSRARTEEE++E+D + D +E+E L NF + DAAIVTP VRAM
Sbjct: 121 SILQTIPSFSFYGSRARTEEEEEEED-REIDGKEEEDGLGNFSI----DAAIVTPEVRAM 180
Query: 181 EQAWTRMNSG-DGIGFVGDLQKEMHLARGPG--GGGGGGGGGGRRRSGGGGGG--EQHGM 240
EQAW+R+ +G DG+GFVGDL+KEM+LARG G GG G GGGGGR + GGGGGG E++GM
Sbjct: 181 EQAWSRVGAGGDGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGM 240
Query: 241 EEYYKKMVVENPGNALVLSNYAEFLYQARSKL 253
EEYYKKMVVENP NALVLSNYAEFLYQ + L
Sbjct: 241 EEYYKKMVVENPSNALVLSNYAEFLYQRKGDL 261
BLAST of Csor.00g001630 vs. ExPASy TrEMBL
Match:
B9GRD4 (TPR_REGION domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G256900 PE=4 SV=2)
HSP 1 Score: 151 bits (382), Expect = 7.83e-40
Identity = 126/300 (42.00%), Postives = 161/300 (53.67%), Query Frame = 0
Query: 1 MLLRSSSTPLLRSLLP-----PDHL--HHHHDA--VGKHSPS--------PSHSPFAF-- 60
MLLRSSSTP+L SLL P++ +HHHD KHSP P H F
Sbjct: 6 MLLRSSSTPVLGSLLSSFSDSPNNSSSNHHHDINPTFKHSPIHHQSINKLPYHQTGCFCL 65
Query: 61 ---RCNNKPLS--FSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKP 120
CN+ P+S S+ + GFRR SEGNL ++D + +N
Sbjct: 66 STISCNSSPISPSISEFSGRSHQGFRRAQSEGNL------QGLLDYSSNNNDAQHYNPNQ 125
Query: 121 SNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDE-------VALEN-- 180
+ K+S R +LETIPSFS+ R R E+ED+ED+DQ +E+E VA EN
Sbjct: 126 TRKVSGRSKCLMLETIPSFSYSTLRGRYEDEDEEDEDQSDVQDEEERAELEENVAAENGH 185
Query: 181 FGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGD---LQKEMHLARGPG------GG 240
FG+ N+M+ ++T VR M++ W+ + F G + +EMHLARGPG G
Sbjct: 186 FGLSNKMENMVLTEEVRVMDRIWS-------VNFEGKREWISEEMHLARGPGIDYGSNGN 245
Query: 241 GGGGGGGGRRRSGGG-----GGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL 253
GGGGG GGR G G GGG+ HG EEYYKKMV ENPGN L L NYA+FLYQ + L
Sbjct: 246 GGGGGYGGRSGGGSGDEFDSGGGDMHGTEEYYKKMVQENPGNPLFLRNYAQFLYQTKRDL 292
BLAST of Csor.00g001630 vs. ExPASy TrEMBL
Match:
A0A4U5QMV6 (TPR_REGION domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000067500 PE=4 SV=1)
HSP 1 Score: 150 bits (380), Expect = 1.36e-39
Identity = 125/297 (42.09%), Postives = 162/297 (54.55%), Query Frame = 0
Query: 1 MLLRSSSTPLLRSLLP-----PDHL--HHHHD--AVGKHSPS--------PSHSPFAF-- 60
MLLRSSSTP+L SLL P++ +HHHD KHSP P H F
Sbjct: 1 MLLRSSSTPVLGSLLSSISDSPNNSSSNHHHDINTTFKHSPIHHQSINKLPYHQTGCFCL 60
Query: 61 ---RCNNKPLS--FSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKP 120
C + P+S S+ + GFRR SEGNL ++D + +N
Sbjct: 61 STISCTSSPISPSISEFSGRSHQGFRRAQSEGNL------QGLLDYSSNNNDEQHYNPNQ 120
Query: 121 SNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDE-------VALEN-- 180
+ K+S R +LETIPSFSF SR R E+ED+ED+DQ +E+E VA EN
Sbjct: 121 TRKVSGRSKCLMLETIPSFSFSTSRGRYEDEDEEDEDQSDVQDEEERAELEENVAAENGH 180
Query: 181 FGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPG------GGGGG 240
FG+ N+M+ ++T VR M++ + +N + ++G+ EMHLARGPG G GGG
Sbjct: 181 FGLSNKMENMVLTEEVRVMDRIYWNVNFEEKREWIGE---EMHLARGPGIDCGSNGNGGG 240
Query: 241 GGGGGRRRSGGG-----GGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL 253
GG GGR G G GGG+ HG EEYYK+MV ENPGN L L NYA+FLYQ + L
Sbjct: 241 GGYGGRSGGGSGDEFDSGGGDMHGTEEYYKRMVQENPGNPLFLRNYAQFLYQTKRDL 288
BLAST of Csor.00g001630 vs. TAIR 10
Match:
AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )
HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 37/82 (45.12%), Postives = 48/82 (58.54%), Query Frame = 0
Query: 172 RMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGG---GGGGEQHGMEEYYKKM 231
R +S DGI + D E+ GGGGG GGG+ RSGG GG G + +Y+KM
Sbjct: 108 RTSSYDGISWALDEDTEV----AGGGGGGMFHGGGKGRSGGRSDGGDGGDDNTDVHYRKM 167
Query: 232 VVENPGNALVLSNYAEFLYQAR 251
+ NPGN + LSNYA+FL + R
Sbjct: 168 IEANPGNGIFLSNYAKFLKEVR 185
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
KAG6576080.1 | 1.32e-178 | 100.00 | hypothetical protein SDJN03_26719, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
KAG7014598.1 | 5.89e-175 | 99.60 | hypothetical protein SDJN02_24777, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
XP_038874351.1 | 2.23e-109 | 73.68 | uncharacterized protein LOC120067050 isoform X2 [Benincasa hispida] | [more] |
XP_038874350.1 | 7.40e-109 | 73.68 | uncharacterized protein LOC120067050 isoform X1 [Benincasa hispida] | [more] |
XP_008459965.1 | 2.02e-105 | 68.01 | PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo] | [more] |
Match Name | E-value | Identity | Description | |
A0A1S3CCM7 | 9.78e-106 | 68.01 | uncharacterized protein LOC103498923 OS=Cucumis melo OX=3656 GN=LOC103498923 PE=... | [more] |
A0A5A7TE10 | 2.07e-104 | 68.28 | TPR_11 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
A0A0A0KA70 | 9.99e-103 | 68.38 | TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G088010 ... | [more] |
B9GRD4 | 7.83e-40 | 42.00 | TPR_REGION domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002... | [more] |
A0A4U5QMV6 | 1.36e-39 | 42.09 | TPR_REGION domain-containing protein OS=Populus alba OX=43335 GN=D5086_000006750... | [more] |
Match Name | E-value | Identity | Description | |
AT5G20190.1 | 1.3e-04 | 45.12 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |