Csor.00g001630 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g001630
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	TPR_REGION domain-containing protein
Location	Csor_Chr17: 10538644 .. 10539408 (+)
RNA-Seq Expression	Csor.00g001630
Synteny	Csor.00g001630

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSsinglestart_codonpolypeptidestop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCTGCTCAGAAGCTCTTCTACGCCGCTTCTTCGCTCTCTTCTCCCGCCGGACCACCTCCATCACCACCATGATGCCGTCGGGAAACACTCCCCTTCCCCCTCCCATTCCCCCTTCGCCTTTCGCTGTAACAATAAACCCCTTTCTTTCTCCGACCACCATCGCGCTGCTCCCACTGGCTTTCGGAGAACCCACTCCGAAGGAAATTTGATTACCCTTTCTCATGCTTCTGATGTAATCGATGTCCATGAAGACCCTTTTTCATTTGATTCATTCAATTTCAAACCCTCCAATAAACTCAGTCACAGGCCTAACCGGTCCGTTCTCGAGACCATACCTTCGTTTTCCTTCTACGGTTCCAGAGCCAGGACTGAAGAAGAAGATGACGAAGACGATGATCAACATGCTGATCCGGAGGAAGATGAAGTTGCCTTGGAGAATTTTGGCGTCCATAACAGGATGGACGCTGCCATTGTAACTCCGGGGGTTAGGGCCATGGAACAAGCTTGGACCAGAATGAATTCAGGAGATGGGATTGGGTTTGTGGGTGATTTACAGAAAGAGATGCATCTGGCGAGAGGGCCAGGTGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTCGACGGCGGAGTGGCGGAGGTGGAGGGGGTGAGCAGCATGGCATGGAGGAGTATTACAAGAAAATGGTAGTGGAAAATCCAGGGAATGCTCTGGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGGCAAGATCTAAGCTTGTTTAA

mRNA sequence

ATGCTGCTCAGAAGCTCTTCTACGCCGCTTCTTCGCTCTCTTCTCCCGCCGGACCACCTCCATCACCACCATGATGCCGTCGGGAAACACTCCCCTTCCCCCTCCCATTCCCCCTTCGCCTTTCGCTGTAACAATAAACCCCTTTCTTTCTCCGACCACCATCGCGCTGCTCCCACTGGCTTTCGGAGAACCCACTCCGAAGGAAATTTGATTACCCTTTCTCATGCTTCTGATGTAATCGATGTCCATGAAGACCCTTTTTCATTTGATTCATTCAATTTCAAACCCTCCAATAAACTCAGTCACAGGCCTAACCGGTCCGTTCTCGAGACCATACCTTCGTTTTCCTTCTACGGTTCCAGAGCCAGGACTGAAGAAGAAGATGACGAAGACGATGATCAACATGCTGATCCGGAGGAAGATGAAGTTGCCTTGGAGAATTTTGGCGTCCATAACAGGATGGACGCTGCCATTGTAACTCCGGGGGTTAGGGCCATGGAACAAGCTTGGACCAGAATGAATTCAGGAGATGGGATTGGGTTTGTGGGTGATTTACAGAAAGAGATGCATCTGGCGAGAGGGCCAGGTGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTCGACGGCGGAGTGGCGGAGGTGGAGGGGGTGAGCAGCATGGCATGGAGGAGTATTACAAGAAAATGGTAGTGGAAAATCCAGGGAATGCTCTGGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGGCAAGATCTAAGCTTGTTTAA

Coding sequence (CDS)

ATGCTGCTCAGAAGCTCTTCTACGCCGCTTCTTCGCTCTCTTCTCCCGCCGGACCACCTCCATCACCACCATGATGCCGTCGGGAAACACTCCCCTTCCCCCTCCCATTCCCCCTTCGCCTTTCGCTGTAACAATAAACCCCTTTCTTTCTCCGACCACCATCGCGCTGCTCCCACTGGCTTTCGGAGAACCCACTCCGAAGGAAATTTGATTACCCTTTCTCATGCTTCTGATGTAATCGATGTCCATGAAGACCCTTTTTCATTTGATTCATTCAATTTCAAACCCTCCAATAAACTCAGTCACAGGCCTAACCGGTCCGTTCTCGAGACCATACCTTCGTTTTCCTTCTACGGTTCCAGAGCCAGGACTGAAGAAGAAGATGACGAAGACGATGATCAACATGCTGATCCGGAGGAAGATGAAGTTGCCTTGGAGAATTTTGGCGTCCATAACAGGATGGACGCTGCCATTGTAACTCCGGGGGTTAGGGCCATGGAACAAGCTTGGACCAGAATGAATTCAGGAGATGGGATTGGGTTTGTGGGTGATTTACAGAAAGAGATGCATCTGGCGAGAGGGCCAGGTGGTGGCGGCGGCGGCGGTGGTGGTGGTGGTCGACGGCGGAGTGGCGGAGGTGGAGGGGGTGAGCAGCATGGCATGGAGGAGTATTACAAGAAAATGGTAGTGGAAAATCCAGGGAATGCTCTGGTTTTGAGTAACTATGCGGAGTTCTTGTACCAGGCAAGATCTAAGCTTGTTTAA

Protein sequence

MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKLV

Homology

[Close]

BLAST of Csor.00g001630 vs. NCBI nr
Match: KAG6576080.1 (hypothetical protein SDJN03_26719, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 501 bits (1289), Expect = 1.32e-178
Identity = 254/254 (100.00%), Postives = 254/254 (100.00%), Query Frame = 0


Query: 1   MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTG 60
           MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTG
Sbjct: 1   MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTG 60

Query: 61  FRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGS 120
           FRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGS
Sbjct: 61  FRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGS 120

Query: 121 RARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIG 180
           RARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIG
Sbjct: 121 RARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIG 180

Query: 181 FVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLS 240
           FVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLS
Sbjct: 181 FVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLS 240

Query: 241 NYAEFLYQARSKLV 254
           NYAEFLYQARSKLV
Sbjct: 241 NYAEFLYQARSKLV 254

[Close]

BLAST of Csor.00g001630 vs. NCBI nr
Match: KAG7014598.1 (hypothetical protein SDJN02_24777, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 495 bits (1275), Expect = 5.89e-175
Identity = 252/253 (99.60%), Postives = 252/253 (99.60%), Query Frame = 0


Query: 1   MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSDHHRAAPTG 60
           MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHS FAFRCNNKPLSFSDHHRAAPTG
Sbjct: 1   MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSLFAFRCNNKPLSFSDHHRAAPTG 60

Query: 61  FRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGS 120
           FRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGS
Sbjct: 61  FRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETIPSFSFYGS 120

Query: 121 RARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIG 180
           RARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIG
Sbjct: 121 RARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIG 180

Query: 181 FVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLS 240
           FVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLS
Sbjct: 181 FVGDLQKEMHLARGPGGGGGGGGGGGRRRSGGGGGGEQHGMEEYYKKMVVENPGNALVLS 240

Query: 241 NYAEFLYQARSKL 253
           NYAEFLYQARSKL
Sbjct: 241 NYAEFLYQARSKL 253

[Close]

BLAST of Csor.00g001630 vs. NCBI nr
Match: XP_038874351.1 (uncharacterized protein LOC120067050 isoform X2 [Benincasa hispida])

HSP 1 Score: 328 bits (840), Expect = 2.23e-109
Identity = 196/266 (73.68%), Postives = 205/266 (77.07%), Query Frame = 0


Query: 1   MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSD-------- 60
           MLL+SSSTPLL SLLPPDH   HHD V KHS SPS  PFAF CNNK LSFS         
Sbjct: 1   MLLKSSSTPLLSSLLPPDH---HHDTVRKHSSSPSPPPFAFHCNNKTLSFSTIASLNSSP 60

Query: 61  HHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETI 120
              A PTGFRRTHSEGNL TLSHA DVIDVHEDPFSFDSFNFKPSN  SH   RS+L+TI
Sbjct: 61  SFSATPTGFRRTHSEGNLNTLSHAPDVIDVHEDPFSFDSFNFKPSN--SHSLKRSLLQTI 120

Query: 121 PSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRM--DAAIVTPGVRAMEQAW 180
           PSFSFY SRARTEE+DD DDDQH DPEEDE  L +FG+ NRM  DAAIVTP V+AME AW
Sbjct: 121 PSFSFYTSRARTEEDDD-DDDQHTDPEEDEDGLGSFGIQNRMVTDAAIVTPEVKAMEHAW 180

Query: 181 TRMNSGDGIGFVGDLQKEMHLARGPG-GGGGGGGGGGRRRSGGGGGG--EQHGMEEYYKK 240
           T     DGIGFVGD QKEM+L    G GG G GGGGGRR SGGGGGG  EQHGMEEYYKK
Sbjct: 181 T-----DGIGFVGDSQKEMYLTSELGIGGQGDGGGGGRRWSGGGGGGGGEQHGMEEYYKK 240

Query: 241 MVVENPGNALVLSNYAEFLYQARSKL 253
           MV+ENPGNALVLSNYAEFLYQ R  L
Sbjct: 241 MVMENPGNALVLSNYAEFLYQRRGDL 255

[Close]

BLAST of Csor.00g001630 vs. NCBI nr
Match: XP_038874350.1 (uncharacterized protein LOC120067050 isoform X1 [Benincasa hispida])

HSP 1 Score: 328 bits (840), Expect = 7.40e-109
Identity = 196/266 (73.68%), Postives = 205/266 (77.07%), Query Frame = 0


Query: 1   MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFSD-------- 60
           MLL+SSSTPLL SLLPPDH   HHD V KHS SPS  PFAF CNNK LSFS         
Sbjct: 1   MLLKSSSTPLLSSLLPPDH---HHDTVRKHSSSPSPPPFAFHCNNKTLSFSTIASLNSSP 60

Query: 61  HHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNRSVLETI 120
              A PTGFRRTHSEGNL TLSHA DVIDVHEDPFSFDSFNFKPSN  SH   RS+L+TI
Sbjct: 61  SFSATPTGFRRTHSEGNLNTLSHAPDVIDVHEDPFSFDSFNFKPSN--SHSLKRSLLQTI 120

Query: 121 PSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRM--DAAIVTPGVRAMEQAW 180
           PSFSFY SRARTEE+DD DDDQH DPEEDE  L +FG+ NRM  DAAIVTP V+AME AW
Sbjct: 121 PSFSFYTSRARTEEDDD-DDDQHTDPEEDEDGLGSFGIQNRMVTDAAIVTPEVKAMEHAW 180

Query: 181 TRMNSGDGIGFVGDLQKEMHLARGPG-GGGGGGGGGGRRRSGGGGGG--EQHGMEEYYKK 240
           T     DGIGFVGD QKEM+L    G GG G GGGGGRR SGGGGGG  EQHGMEEYYKK
Sbjct: 181 T-----DGIGFVGDSQKEMYLTSELGIGGQGDGGGGGRRWSGGGGGGGGEQHGMEEYYKK 240

Query: 241 MVVENPGNALVLSNYAEFLYQARSKL 253
           MV+ENPGNALVLSNYAEFLYQ R  L
Sbjct: 241 MVMENPGNALVLSNYAEFLYQRRGDL 255

[Close]

BLAST of Csor.00g001630 vs. NCBI nr
Match: XP_008459965.1 (PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo])

HSP 1 Score: 319 bits (818), Expect = 2.02e-105
Identity = 185/272 (68.01%), Postives = 213/272 (78.31%), Query Frame = 0


Query: 1   MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFS--------- 60
           MLL+SSSTPLL SLLPPDH HHH+D VGKHSPS     F F CNNKPLSFS         
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPS----TFPFHCNNKPLSFSTTTASLNSS 60

Query: 61  ----DHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNR 120
               DHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDPFS DS NFK SNK S    R
Sbjct: 61  PSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKR 120

Query: 121 SVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAM 180
           SVL+TIPSFSFYGSR RTEE+++E++D+  D EE+E  L NFG++    AA++TP VRAM
Sbjct: 121 SVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGIN----AAVITPEVRAM 180

Query: 181 EQAWTRMNSG-DGIGFVGDLQKEMHLARGPG--GGGGGGGGGGRRRSGGGGGG--EQHGM 240
           EQAW+R+ +G DGIGFVGDL+KEM+LARG G  GG G GGGGGR  +GGGGGG  E++GM
Sbjct: 181 EQAWSRVGAGGDGIGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGM 240

Query: 241 EEYYKKMVVENPGNALVLSNYAEFLYQARSKL 253
           EEYYKKMVVENPGNALVLSNYAEFLY+ +  L
Sbjct: 241 EEYYKKMVVENPGNALVLSNYAEFLYKRKGDL 264

[Close]

BLAST of Csor.00g001630 vs. ExPASy TrEMBL
Match: A0A1S3CCM7 (uncharacterized protein LOC103498923 OS=Cucumis melo OX=3656 GN=LOC103498923 PE=4 SV=1)

HSP 1 Score: 319 bits (818), Expect = 9.78e-106
Identity = 185/272 (68.01%), Postives = 213/272 (78.31%), Query Frame = 0


Query: 1   MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFS--------- 60
           MLL+SSSTPLL SLLPPDH HHH+D VGKHSPS     F F CNNKPLSFS         
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPS----TFPFHCNNKPLSFSTTTASLNSS 60

Query: 61  ----DHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNR 120
               DHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDPFS DS NFK SNK S    R
Sbjct: 61  PSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKR 120

Query: 121 SVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAM 180
           SVL+TIPSFSFYGSR RTEE+++E++D+  D EE+E  L NFG++    AA++TP VRAM
Sbjct: 121 SVLQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGIN----AAVITPEVRAM 180

Query: 181 EQAWTRMNSG-DGIGFVGDLQKEMHLARGPG--GGGGGGGGGGRRRSGGGGGG--EQHGM 240
           EQAW+R+ +G DGIGFVGDL+KEM+LARG G  GG G GGGGGR  +GGGGGG  E++GM
Sbjct: 181 EQAWSRVGAGGDGIGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLHTGGGGGGGGEEYGM 240

Query: 241 EEYYKKMVVENPGNALVLSNYAEFLYQARSKL 253
           EEYYKKMVVENPGNALVLSNYAEFLY+ +  L
Sbjct: 241 EEYYKKMVVENPGNALVLSNYAEFLYKRKGDL 264

[Close]

BLAST of Csor.00g001630 vs. ExPASy TrEMBL
Match: A0A5A7TE10 (TPR_11 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001580 PE=4 SV=1)

HSP 1 Score: 316 bits (810), Expect = 2.07e-104
Identity = 183/268 (68.28%), Postives = 211/268 (78.73%), Query Frame = 0


Query: 1   MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFS--------- 60
           MLL+SSSTPLL SLLPPDH HHH+D VGKHSPS     F F CNNKPLSFS         
Sbjct: 1   MLLKSSSTPLLGSLLPPDHHHHHNDLVGKHSPS----TFPFHCNNKPLSFSTTTASLNSS 60

Query: 61  ----DHHRA-APTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNR 120
               DHHRA AP+GFRRT+SEGNL T+SHAS+VIDVHEDPFS DS NFK SNK S    R
Sbjct: 61  PSFSDHHRAPAPSGFRRTNSEGNLNTISHASNVIDVHEDPFSSDSVNFKSSNKFSRGLKR 120

Query: 121 SVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAM 180
           S+L+TIPSFSFYGSR RTEE+++E++D+  D EE+E  L NFG++    AA++TP VRAM
Sbjct: 121 SILQTIPSFSFYGSRVRTEEDEEEEEDREIDTEEEEDDLGNFGIN----AAVITPEVRAM 180

Query: 181 EQAWTRMNSG-DGIGFVGDLQKEMHLARGPG--GGGGGGGGGGRRRSGGGGGG--EQHGM 240
           EQAW+R+ +G DG+GF GDL+KEM+LARG G  GG G GGGGGR  SGGGGGG  E++GM
Sbjct: 181 EQAWSRVGAGGDGMGFGGDLRKEMYLARGLGIGGGPGDGGGGGRLHSGGGGGGGGEEYGM 240

Query: 241 EEYYKKMVVENPGNALVLSNYAEFLYQA 249
           EEYYKKMVVENPGNALVLSNYAEFLY+A
Sbjct: 241 EEYYKKMVVENPGNALVLSNYAEFLYKA 260

[Close]

BLAST of Csor.00g001630 vs. ExPASy TrEMBL
Match: A0A0A0KA70 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G088010 PE=4 SV=1)

HSP 1 Score: 311 bits (796), Expect = 9.99e-103
Identity = 186/272 (68.38%), Postives = 209/272 (76.84%), Query Frame = 0


Query: 1   MLLRSSSTPLLRSLLPPDHLHHHHDAVGKHSPSPSHSPFAFRCNNKPLSFS--------- 60
           MLL+SSSTPLL SLLPPDH  HHHD  GKHSPS     F F CNNKPLSFS         
Sbjct: 1   MLLKSSSTPLLGSLLPPDH--HHHDLHGKHSPS----TFPFHCNNKPLSFSTTTASLSSS 60

Query: 61  ----DHHRAA-PTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKPSNKLSHRPNR 120
               DHHRAA P+GFRRT+SEGNL T+SHASDVIDVHEDPFSFDS NFK S K  H   R
Sbjct: 61  PAFSDHHRAAAPSGFRRTNSEGNLNTVSHASDVIDVHEDPFSFDSVNFKSSKKFCHGLKR 120

Query: 121 SVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDEVALENFGVHNRMDAAIVTPGVRAM 180
           S+L+TIPSFSFYGSRARTEEE++E+D +  D +E+E  L NF +    DAAIVTP VRAM
Sbjct: 121 SILQTIPSFSFYGSRARTEEEEEEED-REIDGKEEEDGLGNFSI----DAAIVTPEVRAM 180

Query: 181 EQAWTRMNSG-DGIGFVGDLQKEMHLARGPG--GGGGGGGGGGRRRSGGGGGG--EQHGM 240
           EQAW+R+ +G DG+GFVGDL+KEM+LARG G  GG G GGGGGR + GGGGGG  E++GM
Sbjct: 181 EQAWSRVGAGGDGMGFVGDLRKEMYLARGLGIGGGPGDGGGGGRLQGGGGGGGGGEEYGM 240

Query: 241 EEYYKKMVVENPGNALVLSNYAEFLYQARSKL 253
           EEYYKKMVVENP NALVLSNYAEFLYQ +  L
Sbjct: 241 EEYYKKMVVENPSNALVLSNYAEFLYQRKGDL 261

[Close]

BLAST of Csor.00g001630 vs. ExPASy TrEMBL
Match: B9GRD4 (TPR_REGION domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002G256900 PE=4 SV=2)

HSP 1 Score: 151 bits (382), Expect = 7.83e-40
Identity = 126/300 (42.00%), Postives = 161/300 (53.67%), Query Frame = 0


Query: 1   MLLRSSSTPLLRSLLP-----PDHL--HHHHDA--VGKHSPS--------PSHSPFAF-- 60
           MLLRSSSTP+L SLL      P++   +HHHD     KHSP         P H    F  
Sbjct: 6   MLLRSSSTPVLGSLLSSFSDSPNNSSSNHHHDINPTFKHSPIHHQSINKLPYHQTGCFCL 65

Query: 61  ---RCNNKPLS--FSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKP 120
               CN+ P+S   S+    +  GFRR  SEGNL        ++D   +      +N   
Sbjct: 66  STISCNSSPISPSISEFSGRSHQGFRRAQSEGNL------QGLLDYSSNNNDAQHYNPNQ 125

Query: 121 SNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDE-------VALEN-- 180
           + K+S R    +LETIPSFS+   R R E+ED+ED+DQ    +E+E       VA EN  
Sbjct: 126 TRKVSGRSKCLMLETIPSFSYSTLRGRYEDEDEEDEDQSDVQDEEERAELEENVAAENGH 185

Query: 181 FGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGD---LQKEMHLARGPG------GG 240
           FG+ N+M+  ++T  VR M++ W+       + F G    + +EMHLARGPG      G 
Sbjct: 186 FGLSNKMENMVLTEEVRVMDRIWS-------VNFEGKREWISEEMHLARGPGIDYGSNGN 245

Query: 241 GGGGGGGGRRRSGGG-----GGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL 253
           GGGGG GGR   G G     GGG+ HG EEYYKKMV ENPGN L L NYA+FLYQ +  L
Sbjct: 246 GGGGGYGGRSGGGSGDEFDSGGGDMHGTEEYYKKMVQENPGNPLFLRNYAQFLYQTKRDL 292

[Close]

BLAST of Csor.00g001630 vs. ExPASy TrEMBL
Match: A0A4U5QMV6 (TPR_REGION domain-containing protein OS=Populus alba OX=43335 GN=D5086_0000067500 PE=4 SV=1)

HSP 1 Score: 150 bits (380), Expect = 1.36e-39
Identity = 125/297 (42.09%), Postives = 162/297 (54.55%), Query Frame = 0


Query: 1   MLLRSSSTPLLRSLLP-----PDHL--HHHHD--AVGKHSPS--------PSHSPFAF-- 60
           MLLRSSSTP+L SLL      P++   +HHHD     KHSP         P H    F  
Sbjct: 1   MLLRSSSTPVLGSLLSSISDSPNNSSSNHHHDINTTFKHSPIHHQSINKLPYHQTGCFCL 60

Query: 61  ---RCNNKPLS--FSDHHRAAPTGFRRTHSEGNLITLSHASDVIDVHEDPFSFDSFNFKP 120
               C + P+S   S+    +  GFRR  SEGNL        ++D   +      +N   
Sbjct: 61  STISCTSSPISPSISEFSGRSHQGFRRAQSEGNL------QGLLDYSSNNNDEQHYNPNQ 120

Query: 121 SNKLSHRPNRSVLETIPSFSFYGSRARTEEEDDEDDDQHADPEEDE-------VALEN-- 180
           + K+S R    +LETIPSFSF  SR R E+ED+ED+DQ    +E+E       VA EN  
Sbjct: 121 TRKVSGRSKCLMLETIPSFSFSTSRGRYEDEDEEDEDQSDVQDEEERAELEENVAAENGH 180

Query: 181 FGVHNRMDAAIVTPGVRAMEQAWTRMNSGDGIGFVGDLQKEMHLARGPG------GGGGG 240
           FG+ N+M+  ++T  VR M++ +  +N  +   ++G+   EMHLARGPG      G GGG
Sbjct: 181 FGLSNKMENMVLTEEVRVMDRIYWNVNFEEKREWIGE---EMHLARGPGIDCGSNGNGGG 240

Query: 241 GGGGGRRRSGGG-----GGGEQHGMEEYYKKMVVENPGNALVLSNYAEFLYQARSKL 253
           GG GGR   G G     GGG+ HG EEYYK+MV ENPGN L L NYA+FLYQ +  L
Sbjct: 241 GGYGGRSGGGSGDEFDSGGGDMHGTEEYYKRMVQENPGNPLFLRNYAQFLYQTKRDL 288

[Close]

BLAST of Csor.00g001630 vs. TAIR 10
Match: AT5G20190.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.3e-04
Identity = 37/82 (45.12%), Postives = 48/82 (58.54%), Query Frame = 0


Query: 172 RMNSGDGIGFVGDLQKEMHLARGPGGGGGGGGGGGRRRSGG---GGGGEQHGMEEYYKKM 231
           R +S DGI +  D   E+      GGGGG   GGG+ RSGG   GG G     + +Y+KM
Sbjct: 108 RTSSYDGISWALDEDTEV----AGGGGGGMFHGGGKGRSGGRSDGGDGGDDNTDVHYRKM 167

Query: 232 VVENPGNALVLSNYAEFLYQAR 251
           +  NPGN + LSNYA+FL + R
Sbjct: 168 IEANPGNGIFLSNYAKFLKEVR 185

The following BLAST results are available for this feature:

BLAST of Csor.00g001630 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g001630 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576080.1	1.32e-178	100.00	hypothetical protein SDJN03_26719, partial [Cucurbita argyrosperma subsp. sorori...	[more]
KAG7014598.1	5.89e-175	99.60	hypothetical protein SDJN02_24777, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_038874351.1	2.23e-109	73.68	uncharacterized protein LOC120067050 isoform X2 [Benincasa hispida]	[more]
XP_038874350.1	7.40e-109	73.68	uncharacterized protein LOC120067050 isoform X1 [Benincasa hispida]	[more]
XP_008459965.1	2.02e-105	68.01	PREDICTED: uncharacterized protein LOC103498923 [Cucumis melo]	[more]

BLAST of Csor.00g001630 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S3CCM7	9.78e-106	68.01	uncharacterized protein LOC103498923 OS=Cucumis melo OX=3656 GN=LOC103498923 PE=...	[more]
A0A5A7TE10	2.07e-104	68.28	TPR_11 domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676...	[more]
A0A0A0KA70	9.99e-103	68.38	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G088010 ...	[more]
B9GRD4	7.83e-40	42.00	TPR_REGION domain-containing protein OS=Populus trichocarpa OX=3694 GN=POPTR_002...	[more]
A0A4U5QMV6	1.36e-39	42.09	TPR_REGION domain-containing protein OS=Populus alba OX=43335 GN=D5086_000006750...	[more]

BLAST of Csor.00g001630 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G20190.1	1.3e-04	45.12	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 194..219
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 16..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 118..139
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 14..38
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..139
None	No IPR available	PANTHER	PTHR26312:SF78	OSJNBA0004N05.2 PROTEIN	coord: 1..250
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..250

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g001630.m01	Csor.00g001630.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0030244	cellulose biosynthetic process
biological_process	GO:0009833	plant-type primary cell wall biogenesis
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0016759	cellulose synthase activity