Csor.00g001160 (gene) Silver-seed gourd (wild; sororia) v1

Overview


Name	Csor.00g001160
Type	gene
Organism	Cucurbita argyrosperma subsp. sororia (Silver-seed gourd (wild; sororia) v1)
Description	proton pump-interactor BIP103-like isoform X1
Location	Csor_Chr17: 10794409 .. 10794851 (-)
RNA-Seq Expression	Csor.00g001160
Synteny	Csor.00g001160

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSinitialstart_codonintronterminalstop_codon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCGCAACAACTATTGGGATTGTGAGAAATCCAGAGACGATGTTGGTCGTGATAAAGCCATTCTGAAAGACATACAACAACATAAGATTGGCAGGGAGAAAGGTATTGGCGATGGTGTGGTGAACGGAAAATTGTGGAAGTCCTTGGGTTCACAAGAATCCATTCGAGTAGAAGTAAGTAAGAGGCAGAAAGAAAAGGTAGGGGAAATTATTAATTATAGCTGTGGAAATGAATACAGTTGCAGGCTCTGAGCAAGGATTGGGATGAGGCAGCGGAAAATCAGATAAAAGTAAATGCCAAAATGAAGAAGCTAAAGAAAAAGGTAGAGAAGGTAGAAAAGGACATTAAGTTGTTTACAGAAACGCTTGAAAGATGGCGATCGCAAAAAGGATGCGGCATACAACACCATTCTCAAGCTGAAGAAGCAGCAGGAAGAGGTTAG

mRNA sequence

ATGCGCAACAACTATTGGGATTGTGAGAAATCCAGAGACGATGTTGGTCGTGATAAAGCCATTCTGAAAGACATACAACAACATAAGATTGGCAGGGAGAAAGGTATTGGCGATGGTGTGGTGAACGGAAAATTGTGGAAGTCCTTGGGTTCACAAGAATCCATTCGAGTAGAATTGCAGGCTCTGAGCAAGGATTGGGATGAGGCAGCGGAAAATCAGATAAAAGTAAATGCCAAAATGAAGAAGCTAAAGAAAAAGGTAGAGAAGGTAGAAAAGGACATTAAGTTGTTTACAGAAACGCTTGAAAGATGGCGATCGCAAAAAGGATGCGGCATACAACACCATTCTCAAGCTGAAGAAGCAGCAGGAAGAGGTTAG

Coding sequence (CDS)

ATGCGCAACAACTATTGGGATTGTGAGAAATCCAGAGACGATGTTGGTCGTGATAAAGCCATTCTGAAAGACATACAACAACATAAGATTGGCAGGGAGAAAGGTATTGGCGATGGTGTGGTGAACGGAAAATTGTGGAAGTCCTTGGGTTCACAAGAATCCATTCGAGTAGAATTGCAGGCTCTGAGCAAGGATTGGGATGAGGCAGCGGAAAATCAGATAAAAGTAAATGCCAAAATGAAGAAGCTAAAGAAAAAGGTAGAGAAGGTAGAAAAGGACATTAAGTTGTTTACAGAAACGCTTGAAAGATGGCGATCGCAAAAAGGATGCGGCATACAACACCATTCTCAAGCTGAAGAAGCAGCAGGAAGAGGTTAG

Protein sequence

MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETLERWRSQKGCGIQHHSQAEEAAGRG

Homology

[Close]

BLAST of Csor.00g001160 vs. NCBI nr
Match: KAG6576127.1 (hypothetical protein SDJN03_26766, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 250 bits (638), Expect = 1.34e-83
Identity = 125/125 (100.00%), Postives = 125/125 (100.00%), Query Frame = 0


Query: 1   MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 60
           MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ
Sbjct: 1   MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 60

Query: 61  ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETLERWRSQKGCGIQHHSQAEE 120
           ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETLERWRSQKGCGIQHHSQAEE
Sbjct: 61  ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETLERWRSQKGCGIQHHSQAEE 120

Query: 121 AAGRG 125
           AAGRG
Sbjct: 121 AAGRG 125

[Close]

BLAST of Csor.00g001160 vs. NCBI nr
Match: XP_022954370.1 (uncharacterized protein LOC111456628 isoform X4 [Cucurbita moschata])

HSP 1 Score: 187 bits (474), Expect = 4.11e-56
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 60
           MRNNYWDCEKSRDDVGRDKAILKD+QQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ
Sbjct: 177 MRNNYWDCEKSRDDVGRDKAILKDVQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 236

Query: 61  ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETL 101
           ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDI    + L
Sbjct: 237 ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDISCLQKRL 277

[Close]

BLAST of Csor.00g001160 vs. NCBI nr
Match: XP_022954369.1 (uncharacterized protein LOC111456628 isoform X3 [Cucurbita moschata])

HSP 1 Score: 187 bits (474), Expect = 9.74e-56
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 60
           MRNNYWDCEKSRDDVGRDKAILKD+QQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ
Sbjct: 209 MRNNYWDCEKSRDDVGRDKAILKDVQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 268

Query: 61  ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETL 101
           ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDI    + L
Sbjct: 269 ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDISCLQKRL 309

[Close]

BLAST of Csor.00g001160 vs. NCBI nr
Match: XP_023515495.1 (uncharacterized protein LOC111779624 isoform X3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 185 bits (469), Expect = 1.13e-55
Identity = 98/127 (77.17%), Postives = 105/127 (82.68%), Query Frame = 0


Query: 1   MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 60
           MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ
Sbjct: 151 MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 210

Query: 61  ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETLERWRSQKGCG----IQHHS 120
           ALSKDWDE AENQIKVNAKMKKL+KKVEKVEKDI    + L+    +K       ++   
Sbjct: 211 ALSKDWDEVAENQIKVNAKMKKLRKKVEKVEKDISCLQKRLKDGDRKKDAAHNTILKLKK 270

Query: 121 QAEEAAG 123
           Q EE +G
Sbjct: 271 QQEELSG 277

[Close]

BLAST of Csor.00g001160 vs. NCBI nr
Match: XP_022954368.1 (uncharacterized protein LOC111456628 isoform X2 [Cucurbita moschata])

HSP 1 Score: 187 bits (474), Expect = 1.23e-55
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 60
           MRNNYWDCEKSRDDVGRDKAILKD+QQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ
Sbjct: 218 MRNNYWDCEKSRDDVGRDKAILKDVQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 277

Query: 61  ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETL 101
           ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDI    + L
Sbjct: 278 ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDISCLQKRL 318

[Close]

BLAST of Csor.00g001160 vs. ExPASy TrEMBL
Match: A0A6J1GS85 (uncharacterized protein LOC111456628 isoform X4 OS=Cucurbita moschata OX=3662 GN=LOC111456628 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 1.99e-56
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 60
           MRNNYWDCEKSRDDVGRDKAILKD+QQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ
Sbjct: 177 MRNNYWDCEKSRDDVGRDKAILKDVQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 236

Query: 61  ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETL 101
           ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDI    + L
Sbjct: 237 ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDISCLQKRL 277

[Close]

BLAST of Csor.00g001160 vs. ExPASy TrEMBL
Match: A0A6J1GST1 (uncharacterized protein LOC111456628 isoform X3 OS=Cucurbita moschata OX=3662 GN=LOC111456628 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 4.72e-56
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 60
           MRNNYWDCEKSRDDVGRDKAILKD+QQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ
Sbjct: 209 MRNNYWDCEKSRDDVGRDKAILKDVQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 268

Query: 61  ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETL 101
           ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDI    + L
Sbjct: 269 ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDISCLQKRL 309

[Close]

BLAST of Csor.00g001160 vs. ExPASy TrEMBL
Match: A0A6J1GQX3 (uncharacterized protein LOC111456628 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111456628 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 5.97e-56
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 60
           MRNNYWDCEKSRDDVGRDKAILKD+QQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ
Sbjct: 218 MRNNYWDCEKSRDDVGRDKAILKDVQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 277

Query: 61  ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETL 101
           ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDI    + L
Sbjct: 278 ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDISCLQKRL 318

[Close]

BLAST of Csor.00g001160 vs. ExPASy TrEMBL
Match: A0A6J1GQT4 (uncharacterized protein LOC111456628 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456628 PE=4 SV=1)

HSP 1 Score: 187 bits (474), Expect = 7.15e-56
Identity = 94/101 (93.07%), Postives = 96/101 (95.05%), Query Frame = 0


Query: 1   MRNNYWDCEKSRDDVGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 60
           MRNNYWDCEKSRDDVGRDKAILKD+QQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ
Sbjct: 225 MRNNYWDCEKSRDDVGRDKAILKDVQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQ 284

Query: 61  ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETL 101
           ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDI    + L
Sbjct: 285 ALSKDWDEAAENQIKVNAKMKKLKKKVEKVEKDISCLQKRL 325

[Close]

BLAST of Csor.00g001160 vs. ExPASy TrEMBL
Match: A0A6J1DRL6 (proton pump-interactor BIP103-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111022559 PE=4 SV=1)

HSP 1 Score: 112 bits (281), Expect = 3.83e-27
Identity = 65/136 (47.79%), Postives = 87/136 (63.97%), Query Frame = 0


Query: 4   NYWDCEKSRDD-VGRDKAILKDIQQHKIGREKGIGDGVVNGKLWKSLGSQESIRVELQAL 63
           NYW  EK+ +D + R+KAILKDI+QHKI RE  I + VVNGKLW SLGSQE+I+ ELQ L
Sbjct: 141 NYWQYEKTSNDYIAREKAILKDIKQHKIAREIAIANAVVNGKLWNSLGSQEAIQAELQEL 200

Query: 64  SKDWDEAAENQIKVNAKMKKLKKKVEKVEKDIKLFTETL------------------ERW 120
             + DE  E+QI+VNAK+KK+KK+++KVEKDI    + L                  +++
Sbjct: 201 DYNSDELREDQIRVNAKIKKVKKELKKVEKDISSLQKCLNDTNRKNAAAYNTILKLKKQY 260

The following BLAST results are available for this feature:

BLAST of Csor.00g001160 vs.


Match Name	E-value	Identity	Description

BLAST of Csor.00g001160 vs. NCBI nr


Match Name	E-value	Identity	Description
KAG6576127.1	1.34e-83	100.00	hypothetical protein SDJN03_26766, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_022954370.1	4.11e-56	93.07	uncharacterized protein LOC111456628 isoform X4 [Cucurbita moschata]	[more]
XP_022954369.1	9.74e-56	93.07	uncharacterized protein LOC111456628 isoform X3 [Cucurbita moschata]	[more]
XP_023515495.1	1.13e-55	77.17	uncharacterized protein LOC111779624 isoform X3 [Cucurbita pepo subsp. pepo]	[more]
XP_022954368.1	1.23e-55	93.07	uncharacterized protein LOC111456628 isoform X2 [Cucurbita moschata]	[more]

BLAST of Csor.00g001160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1GS85	1.99e-56	93.07	uncharacterized protein LOC111456628 isoform X4 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GST1	4.72e-56	93.07	uncharacterized protein LOC111456628 isoform X3 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GQX3	5.97e-56	93.07	uncharacterized protein LOC111456628 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1GQT4	7.15e-56	93.07	uncharacterized protein LOC111456628 isoform X1 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1DRL6	3.83e-27	47.79	proton pump-interactor BIP103-like isoform X2 OS=Momordica charantia OX=3673 GN=...	[more]

BLAST of Csor.00g001160 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Silver-seed gourd (sororia) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 73..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Csor.00g001160.m01	Csor.00g001160.m01	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010155	regulation of proton transport
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0005886	plasma membrane