CsaV3_UNG203690 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_UNG203690
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Ribulose bisphosphate carboxylase large chain
Location	scaffold18_1: 314151 .. 314767 (-)
RNA-Seq Expression	CsaV3_UNG203690
Synteny	CsaV3_UNG203690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTTGTAGGGAGGGACTTATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCTGAATATGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCGGGAGTTCCACCTGAGGAAGCAGGGGCCGCTGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGACGATGCTATGGAATCGAGCCTGTTGCTGGAGAAGAAAATCAATATATTGCTTATGTAGCTTATCCTCTAGACCTTTTTGAAGAACTAAAAAGAAAGGTCCAGATGACTATCCATATTAACCTGTCTGTCCGAAGGACGGGATTTCTCAATCTGAAAAGAGCCCTCCCCCAGTGCAAAGAATATTGCGAAGACCGCGTAGAAGGAGTCTTATGAAACCTGGACCCTTCTTTCCATATGGATAGTCCTACGGATAAATCCTCCGGACTGCGGACTCCGGACTCTAAAACGGACAGGTGGAAATCTTGTTGAAGACGAAGATGGACCCTTTATATCCGGAGGAGGCTCCATAA

mRNA sequence

ATGAGTTGTAGGGAGGGACTTATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCTGAATATGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCGGGAGTTCCACCTGAGGAAGCAGGGGCCGCTGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGACGATGCTATGGAATCGAGCCTGTTGCTGGAGAAGAAAATCAATATATTGCTTATGTGGAAATCTTGTTGAAGACGAAGATGGACCCTTTATATCCGGAGGAGGCTCCATAA

Coding sequence (CDS)

ATGAGTTGTAGGGAGGGACTTATGTCACCACAAACAGAGACTAAAGCAAGTGTTGGATTCAAAGCTGGTGTTAAAGATTATAAATTGACTTATTATACTCCTGAATATGAAACCAAAGATACTGATATCTTGGCAGCATTCCGAGTAACTCCTCAACCGGGAGTTCCACCTGAGGAAGCAGGGGCCGCTGTAGCTGCTGAATCTTCTACTGGTACATGGACAACTGTGTGGACCGATGGGCTTACCAGTCTTGATCGTTACAAAGGACGATGCTATGGAATCGAGCCTGTTGCTGGAGAAGAAAATCAATATATTGCTTATGTGGAAATCTTGTTGAAGACGAAGATGGACCCTTTATATCCGGAGGAGGCTCCATAA

Protein sequence

MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYVEILLKTKMDPLYPEEAP*

Homology

[Close]

BLAST of CsaV3_UNG203690 vs. NCBI nr
Match: AAZ94659.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Cucumis sativus])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 108

[Close]

BLAST of CsaV3_UNG203690 vs. NCBI nr
Match: QJD26304.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trichosanthes kirilowii])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 108

[Close]

BLAST of CsaV3_UNG203690 vs. NCBI nr
Match: YP_009525194.1 (ribulose bisophosphate carboxylase [Hodgsonia macrocarpa] >AXR94555.1 ribulose bisophosphate carboxylase [Hodgsonia macrocarpa] >AXR94641.1 ribulose bisophosphate carboxylase [Hodgsonia macrocarpa] >AXR94725.1 ribulose bisophosphate carboxylase [Hodgsonia macrocarpa] >AXR94810.1 ribulose bisophosphate carboxylase [Hodgsonia macrocarpa])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 108

[Close]

BLAST of CsaV3_UNG203690 vs. NCBI nr
Match: QJD26653.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trichosanthes rosthornii])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 108

[Close]

BLAST of CsaV3_UNG203690 vs. NCBI nr
Match: QJD26479.1 (ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trichosanthes kirilowii var. japonica] >QJD26566.1 ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trichosanthes kirilowii var. japonica])

HSP 1 Score: 224.9 bits (572), Expect = 3.8e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 108

[Close]

BLAST of CsaV3_UNG203690 vs. ExPASy Swiss-Prot
Match: P27064 (Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus OX=3659 GN=rbcL PE=1 SV=5)

HSP 1 Score: 210.3 bits (534), Expect = 1.3e-53
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 101

[Close]

BLAST of CsaV3_UNG203690 vs. ExPASy Swiss-Prot
Match: O62943 (Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban OX=76396 GN=rbcL PE=3 SV=1)

HSP 1 Score: 209.1 bits (531), Expect = 2.8e-53
Identity = 100/101 (99.01%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTP+YETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 101

[Close]

BLAST of CsaV3_UNG203690 vs. ExPASy Swiss-Prot
Match: P48693 (Ribulose bisphosphate carboxylase large chain OS=Cichorium intybus OX=13427 GN=rbcL PE=3 SV=1)

HSP 1 Score: 208.4 bits (529), Expect = 4.8e-53
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           SSTGTWTTVWTDGLTSLDRYKGRCYGIEPV GEENQYIAYV
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV 101

[Close]

BLAST of CsaV3_UNG203690 vs. ExPASy Swiss-Prot
Match: P48706 (Ribulose bisphosphate carboxylase large chain OS=Lactuca sativa OX=4236 GN=rbcL PE=3 SV=2)

HSP 1 Score: 208.4 bits (529), Expect = 4.8e-53
Identity = 100/101 (99.01%), Postives = 100/101 (99.01%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           SSTGTWTTVWTDGLTSLDRYKGRCYGIEPV GEENQYIAYV
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVPGEENQYIAYV 101

[Close]

BLAST of CsaV3_UNG203690 vs. ExPASy Swiss-Prot
Match: P31202 (Ribulose bisphosphate carboxylase large chain (Fragment) OS=Salacia pallescens OX=4320 GN=rbcL PE=3 SV=2)

HSP 1 Score: 208.4 bits (529), Expect = 4.8e-53
Identity = 99/101 (98.02%), Postives = 101/101 (100.00%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVKDYKLTYYTP+YETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKDYKLTYYTPDYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           SSTGTWTTVWTDGLTSLDRYKGRCYG+EPVAGEENQYIAYV
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYGLEPVAGEENQYIAYV 101

[Close]

BLAST of CsaV3_UNG203690 vs. ExPASy TrEMBL
Match: A0A6M3RTS6 (Ribulose bisphosphate carboxylase large chain OS=Trichosanthes kirilowii var. japonica OX=61011 GN=rbcL PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 108

[Close]

BLAST of CsaV3_UNG203690 vs. ExPASy TrEMBL
Match: A0A346QN70 (Ribulose bisphosphate carboxylase large chain OS=Hodgsonia macrocarpa OX=2184935 GN=rbcL PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 108

[Close]

BLAST of CsaV3_UNG203690 vs. ExPASy TrEMBL
Match: A0A6M3RU72 (Ribulose bisphosphate carboxylase large chain OS=Trichosanthes rosthornii OX=676073 GN=rbcL PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 108

[Close]

BLAST of CsaV3_UNG203690 vs. ExPASy TrEMBL
Match: A0A6M3S661 (Ribulose bisphosphate carboxylase large chain OS=Trichosanthes kirilowii OX=3677 GN=rbcL PE=3 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 1.8e-55
Identity = 108/108 (100.00%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 108

[Close]

BLAST of CsaV3_UNG203690 vs. ExPASy TrEMBL
Match: A0A7D4XNS8 (Ribulose bisphosphate carboxylase large chain OS=Luffa acutangula OX=56866 GN=rbcL PE=3 SV=1)

HSP 1 Score: 223.8 bits (569), Expect = 4.1e-55
Identity = 107/108 (99.07%), Postives = 108/108 (100.00%), Query Frame = 0


Query: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEA 60
           MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEY+TKDTDILAAFRVTPQPGVPPEEA
Sbjct: 1   MSCREGLMSPQTETKASVGFKAGVKDYKLTYYTPEYQTKDTDILAAFRVTPQPGVPPEEA 60

Query: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV
Sbjct: 61  GAAVAAESSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 108

[Close]

BLAST of CsaV3_UNG203690 vs. TAIR 10
Match: ATCG00490.1 (ribulose-bisphosphate carboxylases )

HSP 1 Score: 199.9 bits (507), Expect = 1.2e-51
Identity = 96/101 (95.05%), Postives = 98/101 (97.03%), Query Frame = 0


Query: 8   MSPQTETKASVGFKAGVKDYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 67
           MSPQTETKASVGFKAGVK+YKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE
Sbjct: 1   MSPQTETKASVGFKAGVKEYKLTYYTPEYETKDTDILAAFRVTPQPGVPPEEAGAAVAAE 60

Query: 68  SSTGTWTTVWTDGLTSLDRYKGRCYGIEPVAGEENQYIAYV 109
           SSTGTWTTVWTDGLTSLDRYKGRCY IEPV GEE Q+IAYV
Sbjct: 61  SSTGTWTTVWTDGLTSLDRYKGRCYHIEPVPGEETQFIAYV 101

The following BLAST results are available for this feature:

BLAST of CsaV3_UNG203690 vs. NCBI nr


Match Name	E-value	Identity	Description
AAZ94659.1	3.8e-55	100.00	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Cucumis sativus]	[more]
QJD26304.1	3.8e-55	100.00	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trichosanthes kir...	[more]
YP_009525194.1	3.8e-55	100.00	ribulose bisophosphate carboxylase [Hodgsonia macrocarpa] >AXR94555.1 ribulose b...	[more]
QJD26653.1	3.8e-55	100.00	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trichosanthes ros...	[more]
QJD26479.1	3.8e-55	100.00	ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit [Trichosanthes kir...	[more]

BLAST of CsaV3_UNG203690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P27064	1.3e-53	100.00	Ribulose bisphosphate carboxylase large chain OS=Cucumis sativus OX=3659 GN=rbcL...	[more]
O62943	2.8e-53	99.01	Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban OX=76396 GN=rbc...	[more]
P48693	4.8e-53	99.01	Ribulose bisphosphate carboxylase large chain OS=Cichorium intybus OX=13427 GN=r...	[more]
P48706	4.8e-53	99.01	Ribulose bisphosphate carboxylase large chain OS=Lactuca sativa OX=4236 GN=rbcL ...	[more]
P31202	4.8e-53	98.02	Ribulose bisphosphate carboxylase large chain (Fragment) OS=Salacia pallescens O...	[more]

BLAST of CsaV3_UNG203690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6M3RTS6	1.8e-55	100.00	Ribulose bisphosphate carboxylase large chain OS=Trichosanthes kirilowii var. ja...	[more]
A0A346QN70	1.8e-55	100.00	Ribulose bisphosphate carboxylase large chain OS=Hodgsonia macrocarpa OX=2184935...	[more]
A0A6M3RU72	1.8e-55	100.00	Ribulose bisphosphate carboxylase large chain OS=Trichosanthes rosthornii OX=676...	[more]
A0A6M3S661	1.8e-55	100.00	Ribulose bisphosphate carboxylase large chain OS=Trichosanthes kirilowii OX=3677...	[more]
A0A7D4XNS8	4.1e-55	99.07	Ribulose bisphosphate carboxylase large chain OS=Luffa acutangula OX=56866 GN=rb...	[more]

BLAST of CsaV3_UNG203690 vs. TAIR 10


Match Name	E-value	Identity	Description
ATCG00490.1	1.2e-51	95.05	ribulose-bisphosphate carboxylases	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036422	RuBisCO large subunit, N-terminal domain superfamily	GENE3D	3.30.70.150		coord: 15..113 e-value: 2.2E-36 score: 126.7
IPR036422	RuBisCO large subunit, N-terminal domain superfamily	SUPERFAMILY	54966	RuBisCO, large subunit, small (N-terminal) domain	coord: 16..108
IPR017443	Ribulose bisphosphate carboxylase, large subunit, ferrodoxin-like N-terminal	PFAM	PF02788	RuBisCO_large_N	coord: 31..111 e-value: 1.7E-24 score: 86.3
IPR033966	RuBisCO	PANTHER	PTHR42704	RIBULOSE BISPHOSPHATE CARBOXYLASE	coord: 1..112
None	No IPR available	PANTHER	PTHR42704:SF9	RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN	coord: 1..112

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_UNG203690.1	CsaV3_UNG203690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015977	carbon fixation
molecular_function	GO:0016984	ribulose-bisphosphate carboxylase activity