CsaV3_7G027000 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_7G027000
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionLOB domain-containing protein
Locationchr7: 16618861 .. 16619719 (+)
RNA-Seq ExpressionCsaV3_7G027000
SyntenyCsaV3_7G027000
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCGATGGCAGCCTCTTCTTCTTCTTCTACTCCTCCATGTGGAGCTTGCAAATTTCTTAGAAGAAAGTGTGTCAATGGTTGCATCTTTGCTCCTTATTTCCGCCACGAGCTTGGCGCCTCTCACTTCTCCGCCATCCACAAAGTTTTTGGTGCCAGCAACGCTTCCAAGCTTCTCGCTCACCTCCCTGTCTCCCACCGTTGTGAAGCGGCCGTGACCATCTCATATGAAGCTCAAGCGAGACTTCAAGATCCGATTTATGGTTGCGTTTCTCATATTATCGCTCTCCAACAACAGGTTTTTTAATAATAAAATTTACCATATAAACGAACTCATATCATCCAACTTCAAGTTTTAGATTCCATGATAATAAACTTTATCATAATTTTTAAAGAAAAGCAAAACGATCATACTTATTTGATCTCCTCACCTTAAACTTTTGAGTTTATGTTAATTTATTCGAAACCCTAATTTTCGAAATCGAGTTTGATGAGTATTTGAATGGGTGTGGAAATTGTAGGTTATGAATCTAAGGGCTCAAGTGGCTTATTTAAGAGAACAAGCAGCACAAATTCTTCTCAACAATTATACCACAAGAAACCCTACTGAATTACTTTATGAAAAATCTCCATTTTGTTATTCCGATGACCCATTCTTAGATCTTCAAAGCTGGCTTCTGGCTGAGAGCTGCAGCGCCACCGCACCGGAGCTTGAACCTGCGGCGGTGCCGTACTTTGAGATGAGTGTCGTCGATTCAAAACTCGCCGGAGATTTCTGTTGCTAAGGATTATTGTGGATCGTGCGATCTCTTCCCCCCTCGTTTTCATATCAACGGCAAATAATAATTCGAAGTATGGGTGT

mRNA sequence

ATGGCAGCCTCTTCTTCTTCTTCTACTCCTCCATGTGGAGCTTGCAAATTTCTTAGAAGAAAGTGTGTCAATGGTTGCATCTTTGCTCCTTATTTCCGCCACGAGCTTGGCGCCTCTCACTTCTCCGCCATCCACAAAGTTTTTGGTGCCAGCAACGCTTCCAAGCTTCTCGCTCACCTCCCTGTCTCCCACCGTTGTGAAGCGGCCGTGACCATCTCATATGAAGCTCAAGCGAGACTTCAAGATCCGATTTATGGTTGCGTTTCTCATATTATCGCTCTCCAACAACAGGTTATGAATCTAAGGGCTCAAGTGGCTTATTTAAGAGAACAAGCAGCACAAATTCTTCTCAACAATTATACCACAAGAAACCCTACTGAATTACTTTATGAAAAATCTCCATTTTGTTATTCCGATGACCCATTCTTAGATCTTCAAAGCTGGCTTCTGGCTGAGAGCTGCAGCGCCACCGCACCGGAGCTTGAACCTGCGGCGGTGCCGTACTTTGAGATGAGTGTCGTCGATTCAAAACTCGCCGGAGATTTCTGTTGCTAA

Coding sequence (CDS)

ATGGCAGCCTCTTCTTCTTCTTCTACTCCTCCATGTGGAGCTTGCAAATTTCTTAGAAGAAAGTGTGTCAATGGTTGCATCTTTGCTCCTTATTTCCGCCACGAGCTTGGCGCCTCTCACTTCTCCGCCATCCACAAAGTTTTTGGTGCCAGCAACGCTTCCAAGCTTCTCGCTCACCTCCCTGTCTCCCACCGTTGTGAAGCGGCCGTGACCATCTCATATGAAGCTCAAGCGAGACTTCAAGATCCGATTTATGGTTGCGTTTCTCATATTATCGCTCTCCAACAACAGGTTATGAATCTAAGGGCTCAAGTGGCTTATTTAAGAGAACAAGCAGCACAAATTCTTCTCAACAATTATACCACAAGAAACCCTACTGAATTACTTTATGAAAAATCTCCATTTTGTTATTCCGATGACCCATTCTTAGATCTTCAAAGCTGGCTTCTGGCTGAGAGCTGCAGCGCCACCGCACCGGAGCTTGAACCTGCGGCGGTGCCGTACTTTGAGATGAGTGTCGTCGATTCAAAACTCGCCGGAGATTTCTGTTGCTAA

Protein sequence

MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNYTTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAGDFCC*
Homology
BLAST of CsaV3_7G027000 vs. NCBI nr
Match: XP_004150342.1 (LOB domain-containing protein 29 [Cucumis sativus] >KGN44703.1 hypothetical protein Csa_015971 [Cucumis sativus])

HSP 1 Score: 374.8 bits (961), Expect = 4.3e-100
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0

Query: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120

Query: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG
Sbjct: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180

Query: 181 DFCC 185
           DFCC
Sbjct: 181 DFCC 184

BLAST of CsaV3_7G027000 vs. NCBI nr
Match: XP_008447245.1 (PREDICTED: LOB domain-containing protein 29 [Cucumis melo])

HSP 1 Score: 350.1 bits (897), Expect = 1.1e-92
Identity = 173/184 (94.02%), Postives = 176/184 (95.65%), Query Frame = 0

Query: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSS+ PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVA LREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNY 120

Query: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRN TEL YEKSPF YSDDPFLDLQSWLL ESC+A APE EPAAVPYFEMSV+DSKLAG
Sbjct: 121 TTRNSTELPYEKSPFYYSDDPFLDLQSWLLTESCTAAAPEFEPAAVPYFEMSVIDSKLAG 180

Query: 181 DFCC 185
           DFCC
Sbjct: 181 DFCC 184

BLAST of CsaV3_7G027000 vs. NCBI nr
Match: KAA0042058.1 (LOB domain-containing protein 29 [Cucumis melo var. makuwa] >TYK18001.1 LOB domain-containing protein 29 [Cucumis melo var. makuwa])

HSP 1 Score: 349.0 bits (894), Expect = 2.5e-92
Identity = 172/184 (93.48%), Postives = 176/184 (95.65%), Query Frame = 0

Query: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSS+ PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVA LREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNY 120

Query: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRNPTEL YEKSP  YSDDPFLDLQSWLLAESC+  APE EPAA+PYFEMSVV+SKLAG
Sbjct: 121 TTRNPTELPYEKSPLYYSDDPFLDLQSWLLAESCTVAAPEFEPAAIPYFEMSVVNSKLAG 180

Query: 181 DFCC 185
           DFCC
Sbjct: 181 DFCC 184

BLAST of CsaV3_7G027000 vs. NCBI nr
Match: XP_038896394.1 (LOB domain-containing protein 29-like [Benincasa hispida])

HSP 1 Score: 339.0 bits (868), Expect = 2.6e-89
Identity = 169/183 (92.35%), Postives = 174/183 (95.08%), Query Frame = 0

Query: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSS+PPCGACKFLRRKCVNGCIFAP+FRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSPPCGACKFLRRKCVNGCIFAPHFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRC+AAVTISYEAQARLQDPIYGCVSHI ALQQQVMNLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCDAAVTISYEAQARLQDPIYGCVSHIFALQQQVMNLRAQVAYLREQAAQILLNNY 120

Query: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRNP EL YEKSPF YSDDP LDLQ+WLLAESCSA APE EPAAVPY EMSVVDS LAG
Sbjct: 121 TTRNPIELPYEKSPF-YSDDPLLDLQTWLLAESCSAAAPEFEPAAVPYVEMSVVDSNLAG 180

Query: 181 DFC 184
           +FC
Sbjct: 181 NFC 182

BLAST of CsaV3_7G027000 vs. NCBI nr
Match: XP_022156602.1 (LOB domain-containing protein 29-like [Momordica charantia])

HSP 1 Score: 312.4 bits (799), Expect = 2.6e-81
Identity = 155/184 (84.24%), Postives = 163/184 (88.59%), Query Frame = 0

Query: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAAS+SSS+ PCGACKFLRRKCVNGCIFAPYFRHELG SHFSA+HKVFGASNASKLLAHL
Sbjct: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAA+TISYEAQARLQDPIYGCVSHI  LQQQV+NLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120

Query: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           T RNP ELLY KSPF  S DP  DLQSWLLAE  SA APE EPAAVP+ EMS+ D  +AG
Sbjct: 121 TIRNPNELLYGKSPF--SGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAG 180

Query: 181 DFCC 185
           D CC
Sbjct: 181 DCCC 182

BLAST of CsaV3_7G027000 vs. ExPASy Swiss-Prot
Match: Q9M2J7 (LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 3.1e-48
Identity = 97/142 (68.31%), Postives = 114/142 (80.28%), Query Frame = 0

Query: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           M +SSSSS  PCGACKFLRRKC  GC+FAPYF HE GASHF+AIHKVFGASNASKLL+HL
Sbjct: 1   MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQ--ILLN 120
           P+S RCEAA+TISYEAQARLQDPIYGCVSHI ALQQQV+NL+A++  L++QAAQ  I  +
Sbjct: 61  PISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFAD 120

Query: 121 NYTTRNPTELLYEKSPFCYSDD 141
           + T+ NP     + +   Y  D
Sbjct: 121 SPTSENPNSYYGDTTKAPYHHD 142

BLAST of CsaV3_7G027000 vs. ExPASy Swiss-Prot
Match: Q5UG13 (LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=CRL1 PE=1 SV=1)

HSP 1 Score: 171.4 bits (433), Expect = 9.6e-42
Identity = 83/104 (79.81%), Postives = 93/104 (89.42%), Query Frame = 0

Query: 11  PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPVSHRCEAAV 70
           PCGACKFLRRKCV GC+FAPYF HE GA+HF+AIHKVFGASN SKLLAHLP++ R EAAV
Sbjct: 7   PCGACKFLRRKCVRGCVFAPYFCHEQGAAHFAAIHKVFGASNVSKLLAHLPLADRPEAAV 66

Query: 71  TISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQ 115
           TISYEAQARL+DPIYGCV+HI ALQQQVM L+AQ+A L+  AAQ
Sbjct: 67  TISYEAQARLRDPIYGCVAHIFALQQQVMTLQAQLASLKAAAAQ 110

BLAST of CsaV3_7G027000 vs. ExPASy Swiss-Prot
Match: Q9SLB6 (LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 SV=1)

HSP 1 Score: 165.6 bits (418), Expect = 5.2e-40
Identity = 79/112 (70.54%), Postives = 94/112 (83.93%), Query Frame = 0

Query: 6   SSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPVSHR 65
           + S  PCGACKFLRR+CV GC+FAPYF HE GASHF+AIH+VFGASNASKLL+HLP+  R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 66  CEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILL 118
            EAA TI YEAQAR QDPIYGCVSHI +LQQQV+NL+ Q+  L++QA Q ++
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

BLAST of CsaV3_7G027000 vs. ExPASy Swiss-Prot
Match: O22131 (LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 SV=2)

HSP 1 Score: 158.3 bits (399), Expect = 8.4e-38
Identity = 77/121 (63.64%), Postives = 94/121 (77.69%), Query Frame = 0

Query: 3   ASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPV 62
           +S      PCGACKFLRRKCV GCIFAPYF  E G+++F+A+HKVFGASN SKLL H+PV
Sbjct: 29  SSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPV 88

Query: 63  SHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNYTT 122
             R +A VTI YEAQAR++DPIYGCV+HI ALQQQV+NL+A+V+YL+   A + L    T
Sbjct: 89  HRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLELPQPQT 148

Query: 123 R 124
           R
Sbjct: 149 R 149

BLAST of CsaV3_7G027000 vs. ExPASy Swiss-Prot
Match: Q9SJW5 (LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 3.5e-36
Identity = 72/104 (69.23%), Postives = 88/104 (84.62%), Query Frame = 0

Query: 11  PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPVSHRCEAAV 70
           PCG CKFLRRKCV GC+FAPYF +E G+S+F+AIHKVFGASN SKL++HLP   RC+A  
Sbjct: 7   PCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHDRCDAVR 66

Query: 71  TISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQ 115
           TISYEA +RL DPIYGCVS I +LQQQV++L+AQV  LRE+A++
Sbjct: 67  TISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASR 110

BLAST of CsaV3_7G027000 vs. ExPASy TrEMBL
Match: A0A0A0K5D4 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G373460 PE=3 SV=1)

HSP 1 Score: 374.8 bits (961), Expect = 2.1e-100
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0

Query: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120

Query: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG
Sbjct: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180

Query: 181 DFCC 185
           DFCC
Sbjct: 181 DFCC 184

BLAST of CsaV3_7G027000 vs. ExPASy TrEMBL
Match: A0A1S3BGZ5 (LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489736 PE=3 SV=1)

HSP 1 Score: 350.1 bits (897), Expect = 5.5e-93
Identity = 173/184 (94.02%), Postives = 176/184 (95.65%), Query Frame = 0

Query: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSS+ PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVA LREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNY 120

Query: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRN TEL YEKSPF YSDDPFLDLQSWLL ESC+A APE EPAAVPYFEMSV+DSKLAG
Sbjct: 121 TTRNSTELPYEKSPFYYSDDPFLDLQSWLLTESCTAAAPEFEPAAVPYFEMSVIDSKLAG 180

Query: 181 DFCC 185
           DFCC
Sbjct: 181 DFCC 184

BLAST of CsaV3_7G027000 vs. ExPASy TrEMBL
Match: A0A5D3D179 (LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G003110 PE=3 SV=1)

HSP 1 Score: 349.0 bits (894), Expect = 1.2e-92
Identity = 172/184 (93.48%), Postives = 176/184 (95.65%), Query Frame = 0

Query: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAASSSSS+ PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL
Sbjct: 1   MAASSSSSSSPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVA LREQAAQILLNNY
Sbjct: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVACLREQAAQILLNNY 120

Query: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           TTRNPTEL YEKSP  YSDDPFLDLQSWLLAESC+  APE EPAA+PYFEMSVV+SKLAG
Sbjct: 121 TTRNPTELPYEKSPLYYSDDPFLDLQSWLLAESCTVAAPEFEPAAIPYFEMSVVNSKLAG 180

Query: 181 DFCC 185
           DFCC
Sbjct: 181 DFCC 184

BLAST of CsaV3_7G027000 vs. ExPASy TrEMBL
Match: A0A6J1DSE8 (LOB domain-containing protein 29-like OS=Momordica charantia OX=3673 GN=LOC111023473 PE=3 SV=1)

HSP 1 Score: 312.4 bits (799), Expect = 1.3e-81
Identity = 155/184 (84.24%), Postives = 163/184 (88.59%), Query Frame = 0

Query: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           MAAS+SSS+ PCGACKFLRRKCVNGCIFAPYFRHELG SHFSA+HKVFGASNASKLLAHL
Sbjct: 1   MAASASSSSSPCGACKFLRRKCVNGCIFAPYFRHELGTSHFSAVHKVFGASNASKLLAHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNY 120
           PVSHRCEAA+TISYEAQARLQDPIYGCVSHI  LQQQV+NLRAQVAYLREQAAQILLNNY
Sbjct: 61  PVSHRCEAAITISYEAQARLQDPIYGCVSHIFTLQQQVLNLRAQVAYLREQAAQILLNNY 120

Query: 121 TTRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAG 180
           T RNP ELLY KSPF  S DP  DLQSWLLAE  SA APE EPAAVP+ EMS+ D  +AG
Sbjct: 121 TIRNPNELLYGKSPF--SGDPLQDLQSWLLAEDRSAAAPEFEPAAVPFVEMSLADPNVAG 180

Query: 181 DFCC 185
           D CC
Sbjct: 181 DCCC 182

BLAST of CsaV3_7G027000 vs. ExPASy TrEMBL
Match: A0A6J1KRG7 (LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC111498009 PE=3 SV=1)

HSP 1 Score: 304.3 bits (778), Expect = 3.5e-79
Identity = 149/183 (81.42%), Postives = 159/183 (86.89%), Query Frame = 0

Query: 2   AASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLP 61
           ++SSSSS+PPCGACKFLRRKCVNGCIFAPYFRH+LGASHFSA+HKVFGASNASKLLAHLP
Sbjct: 4   SSSSSSSSPPCGACKFLRRKCVNGCIFAPYFRHDLGASHFSAVHKVFGASNASKLLAHLP 63

Query: 62  VSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNYT 121
           VSHR +AAVTISYEAQARLQDPIYGC+S I ALQ QVMNLRAQVAYLREQAAQILLN Y 
Sbjct: 64  VSHRSQAAVTISYEAQARLQDPIYGCISQIFALQHQVMNLRAQVAYLREQAAQILLNGYI 123

Query: 122 TRNPTELLYEKSPFCYSDDPFLDLQSWLLAESCSATAPELEPAAVPYFEMSVVDSKLAGD 181
           TRNP ELLY  S   YSD+  LDLQ+WLL ESCS  APE EP A PY EM + DS LAGD
Sbjct: 124 TRNPNELLYGNS-LSYSDEQLLDLQTWLLEESCSTAAPEFEPTAAPYVEMGIADSNLAGD 183

Query: 182 FCC 185
           FCC
Sbjct: 184 FCC 185

BLAST of CsaV3_7G027000 vs. TAIR 10
Match: AT3G58190.1 (lateral organ boundaries-domain 29 )

HSP 1 Score: 193.0 bits (489), Expect = 2.2e-49
Identity = 97/142 (68.31%), Postives = 114/142 (80.28%), Query Frame = 0

Query: 1   MAASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHL 60
           M +SSSSS  PCGACKFLRRKC  GC+FAPYF HE GASHF+AIHKVFGASNASKLL+HL
Sbjct: 1   MTSSSSSSGSPCGACKFLRRKCAKGCVFAPYFCHEQGASHFAAIHKVFGASNASKLLSHL 60

Query: 61  PVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQ--ILLN 120
           P+S RCEAA+TISYEAQARLQDPIYGCVSHI ALQQQV+NL+A++  L++QAAQ  I  +
Sbjct: 61  PISDRCEAAITISYEAQARLQDPIYGCVSHIFALQQQVVNLQAELEILKQQAAQSMIFAD 120

Query: 121 NYTTRNPTELLYEKSPFCYSDD 141
           + T+ NP     + +   Y  D
Sbjct: 121 SPTSENPNSYYGDTTKAPYHHD 142

BLAST of CsaV3_7G027000 vs. TAIR 10
Match: AT2G42440.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 165.6 bits (418), Expect = 3.7e-41
Identity = 79/112 (70.54%), Postives = 94/112 (83.93%), Query Frame = 0

Query: 6   SSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPVSHR 65
           + S  PCGACKFLRR+CV GC+FAPYF HE GASHF+AIH+VFGASNASKLL+HLP+  R
Sbjct: 2   TGSGSPCGACKFLRRRCVKGCVFAPYFCHEQGASHFAAIHQVFGASNASKLLSHLPMEDR 61

Query: 66  CEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILL 118
            EAA TI YEAQAR QDPIYGCVSHI +LQQQV+NL+ Q+  L++QA Q ++
Sbjct: 62  REAATTIYYEAQARRQDPIYGCVSHIFSLQQQVVNLQTQLEILKQQATQSMM 113

BLAST of CsaV3_7G027000 vs. TAIR 10
Match: AT2G45420.1 (LOB domain-containing protein 18 )

HSP 1 Score: 158.3 bits (399), Expect = 5.9e-39
Identity = 77/121 (63.64%), Postives = 94/121 (77.69%), Query Frame = 0

Query: 3   ASSSSSTPPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPV 62
           +S      PCGACKFLRRKCV GCIFAPYF  E G+++F+A+HKVFGASN SKLL H+PV
Sbjct: 29  SSGGGGGGPCGACKFLRRKCVPGCIFAPYFDSEQGSAYFAAVHKVFGASNVSKLLLHIPV 88

Query: 63  SHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQILLNNYTT 122
             R +A VTI YEAQAR++DPIYGCV+HI ALQQQV+NL+A+V+YL+   A + L    T
Sbjct: 89  HRRSDAVVTICYEAQARIRDPIYGCVAHIFALQQQVVNLQAEVSYLQAHLASLELPQPQT 148

Query: 123 R 124
           R
Sbjct: 149 R 149

BLAST of CsaV3_7G027000 vs. TAIR 10
Match: AT2G31310.1 (LOB domain-containing protein 14 )

HSP 1 Score: 152.9 bits (385), Expect = 2.5e-37
Identity = 72/104 (69.23%), Postives = 88/104 (84.62%), Query Frame = 0

Query: 11  PCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKLLAHLPVSHRCEAAV 70
           PCG CKFLRRKCV GC+FAPYF +E G+S+F+AIHKVFGASN SKL++HLP   RC+A  
Sbjct: 7   PCGGCKFLRRKCVEGCVFAPYFCYEEGSSNFAAIHKVFGASNFSKLISHLPDHDRCDAVR 66

Query: 71  TISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAAQ 115
           TISYEA +RL DPIYGCVS I +LQQQV++L+AQV  LRE+A++
Sbjct: 67  TISYEAHSRLHDPIYGCVSQIFSLQQQVVSLQAQVVLLREEASR 110

BLAST of CsaV3_7G027000 vs. TAIR 10
Match: AT2G42430.1 (lateral organ boundaries-domain 16 )

HSP 1 Score: 152.1 bits (383), Expect = 4.3e-37
Identity = 76/117 (64.96%), Postives = 91/117 (77.78%), Query Frame = 0

Query: 1   MAASSSSST----PPCGACKFLRRKCVNGCIFAPYFRHELGASHFSAIHKVFGASNASKL 60
           MA+S + +T     PCGACKFLRRKC + CIFAPYF  E GA+ F+AIHKVFGASN SKL
Sbjct: 1   MASSGNGTTAGTGSPCGACKFLRRKCASDCIFAPYFSSEQGAARFAAIHKVFGASNVSKL 60

Query: 61  LAHLPVSHRCEAAVTISYEAQARLQDPIYGCVSHIIALQQQVMNLRAQVAYLREQAA 114
           L ++P+  RCEA VTI+YEAQARL DP+YGCVSHI ALQQQV  L++QV  ++ Q A
Sbjct: 61  LLNVPIHDRCEAVVTIAYEAQARLHDPVYGCVSHIFALQQQVAFLQSQVMQMKAQIA 117

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_004150342.14.3e-100100.00LOB domain-containing protein 29 [Cucumis sativus] >KGN44703.1 hypothetical prot... [more]
XP_008447245.11.1e-9294.02PREDICTED: LOB domain-containing protein 29 [Cucumis melo][more]
KAA0042058.12.5e-9293.48LOB domain-containing protein 29 [Cucumis melo var. makuwa] >TYK18001.1 LOB doma... [more]
XP_038896394.12.6e-8992.35LOB domain-containing protein 29-like [Benincasa hispida][more]
XP_022156602.12.6e-8184.24LOB domain-containing protein 29-like [Momordica charantia][more]
Match NameE-valueIdentityDescription
Q9M2J73.1e-4868.31LOB domain-containing protein 29 OS=Arabidopsis thaliana OX=3702 GN=LBD29 PE=2 S... [more]
Q5UG139.6e-4279.81LOB domain-containing protein CRL1 OS=Oryza sativa subsp. japonica OX=39947 GN=C... [more]
Q9SLB65.2e-4070.54LOB domain-containing protein 17 OS=Arabidopsis thaliana OX=3702 GN=LBD17 PE=2 S... [more]
O221318.4e-3863.64LOB domain-containing protein 18 OS=Arabidopsis thaliana OX=3702 GN=LBD18 PE=1 S... [more]
Q9SJW53.5e-3669.23LOB domain-containing protein 14 OS=Arabidopsis thaliana OX=3702 GN=LBD14 PE=1 S... [more]
Match NameE-valueIdentityDescription
A0A0A0K5D42.1e-100100.00LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_7G373460 PE=3 SV... [more]
A0A1S3BGZ55.5e-9394.02LOB domain-containing protein 29 OS=Cucumis melo OX=3656 GN=LOC103489736 PE=3 SV... [more]
A0A5D3D1791.2e-9293.48LOB domain-containing protein 29 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... [more]
A0A6J1DSE81.3e-8184.24LOB domain-containing protein 29-like OS=Momordica charantia OX=3673 GN=LOC11102... [more]
A0A6J1KRG73.5e-7981.42LOB domain-containing protein 29-like OS=Cucurbita maxima OX=3661 GN=LOC11149800... [more]
Match NameE-valueIdentityDescription
AT3G58190.12.2e-4968.31lateral organ boundaries-domain 29 [more]
AT2G42440.13.7e-4170.54Lateral organ boundaries (LOB) domain family protein [more]
AT2G45420.15.9e-3963.64LOB domain-containing protein 18 [more]
AT2G31310.12.5e-3769.23LOB domain-containing protein 14 [more]
AT2G42430.14.3e-3764.96lateral organ boundaries-domain 16 [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 91..111
NoneNo IPR availablePANTHERPTHR31529:SF26LOB DOMAIN-CONTAINING PROTEIN 17-RELATEDcoord: 7..128
NoneNo IPR availablePANTHERPTHR31529LOB DOMAIN CONTAINING PROTEINcoord: 7..128
IPR004883Lateral organ boundaries, LOBPFAMPF03195LOBcoord: 11..108
e-value: 1.7E-34
score: 118.3
IPR004883Lateral organ boundaries, LOBPROSITEPS50891LOBcoord: 10..112
score: 21.478207

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_7G027000.1CsaV3_7G027000.1mRNA