CsaV3_7G023710 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGTAGACACAATAGTGAACCTACCATGGTTGGTACCTCCATAGCGCTGTTACAAGAGAGATTCAGACAATTGCAGAAAAACAAGCAAAGGAGAGAGAGGAAGGAGCTTCTTAACCTGCTATTCGAATCTAATAGGGTTGACGCCTCGATAATGCATTTAGAACCAAATGGCTCGTCGACCTCAAGAGATTTGGATTCCAATTCCCTCTCCCTTGGTTTGAACTTGGAGAATAATGCAGGTAAGCAAGTTGATATTGATATCCATGAAGCCAGGTCGATGCCAGGTGACACCAAGTTTGAGCTTGGAAACTCATTCATG ATGGGTAGACACAATAGTGAACCTACCATGGTTGGTACCTCCATAGCGCTGTTACAAGAGAGATTCAGACAATTGCAGAAAAACAAGCAAAGGAGAGAGAGGAAGGAGCTTCTTAACCTGCTATTCGAATCTAATAGGGTTGACGCCTCGATAATGCATTTAGAACCAAATGGCTCGTCGACCTCAAGAGATTTGGATTCCAATTCCCTCTCCCTTGGTTTGAACTTGGAGAATAATGCAGGTAAGCAAGTTGATATTGATATCCATGAAGCCAGGTCGATGCCAGGTGACACCAAGTTTGAGCTTGGAAACTCATTCATG ATGGGTAGACACAATAGTGAACCTACCATGGTTGGTACCTCCATAGCGCTGTTACAAGAGAGATTCAGACAATTGCAGAAAAACAAGCAAAGGAGAGAGAGGAAGGAGCTTCTTAACCTGCTATTCGAATCTAATAGGGTTGACGCCTCGATAATGCATTTAGAACCAAATGGCTCGTCGACCTCAAGAGATTTGGATTCCAATTCCCTCTCCCTTGGTTTGAACTTGGAGAATAATGCAGGTAAGCAAGTTGATATTGATATCCATGAAGCCAGGTCGATGCCAGGTGACACCAAGTTTGAGCTTGGAAACTCATTCATG MGRHNSEPTMVGTSIALLQERFRQLQKNKQRRERKELLNLLFESNRVDASIMHLEPNGSSTSRDLDSNSLSLGLNLENNAGKQVDIDIHEARSMPGDTKFELGNSFM Homology
BLAST of CsaV3_7G023710 vs. NCBI nr
Match: KAE8646145.1 (hypothetical protein Csa_016195, partial [Cucumis sativus]) HSP 1 Score: 208.8 bits (530), Expect = 2.4e-50 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsaV3_7G023710 vs. NCBI nr
Match: KAA0048752.1 (hypothetical protein E6C27_scaffold43G00600 [Cucumis melo var. makuwa] >TYK31583.1 hypothetical protein E5676_scaffold172G00780 [Cucumis melo var. makuwa]) HSP 1 Score: 174.9 bits (442), Expect = 3.8e-40 Identity = 94/109 (86.24%), Postives = 99/109 (90.83%), Query Frame = 0
BLAST of CsaV3_7G023710 vs. NCBI nr
Match: KAG6589104.1 (hypothetical protein SDJN03_17669, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 121.3 bits (303), Expect = 5.0e-24 Identity = 70/95 (73.68%), Postives = 84/95 (88.42%), Query Frame = 0
BLAST of CsaV3_7G023710 vs. NCBI nr
Match: KAG6572236.1 (hypothetical protein SDJN03_28964, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 103.6 bits (257), Expect = 1.1e-18 Identity = 64/99 (64.65%), Postives = 71/99 (71.72%), Query Frame = 0
BLAST of CsaV3_7G023710 vs. NCBI nr
Match: PRQ52543.1 (hypothetical protein RchiOBHm_Chr2g0156651 [Rosa chinensis]) HSP 1 Score: 77.8 bits (190), Expect = 6.3e-11 Identity = 50/95 (52.63%), Postives = 60/95 (63.16%), Query Frame = 0
BLAST of CsaV3_7G023710 vs. ExPASy TrEMBL
Match: A0A0A0K617 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G272125 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.2e-50 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of CsaV3_7G023710 vs. ExPASy TrEMBL
Match: A0A5D3E685 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold172G00780 PE=4 SV=1) HSP 1 Score: 174.9 bits (442), Expect = 1.8e-40 Identity = 94/109 (86.24%), Postives = 99/109 (90.83%), Query Frame = 0
BLAST of CsaV3_7G023710 vs. ExPASy TrEMBL
Match: A0A2P6S1J5 (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr2g0156651 PE=4 SV=1) HSP 1 Score: 77.8 bits (190), Expect = 3.1e-11 Identity = 50/95 (52.63%), Postives = 60/95 (63.16%), Query Frame = 0
BLAST of CsaV3_7G023710 vs. ExPASy TrEMBL
Match: G7KEN3 (Uncharacterized protein OS=Medicago truncatula OX=3880 GN=11418701 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.4e-10 Identity = 46/82 (56.10%), Postives = 54/82 (65.85%), Query Frame = 0
BLAST of CsaV3_7G023710 vs. ExPASy TrEMBL
Match: A0A2Z6PF68 (Uncharacterized protein OS=Trifolium subterraneum OX=3900 GN=TSUD_254380 PE=4 SV=1) HSP 1 Score: 72.0 bits (175), Expect = 1.7e-09 Identity = 45/86 (52.33%), Postives = 56/86 (65.12%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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