CsaV3_7G022180 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AACTAAAATAAGTTAGTTTTCTAAAACTTGTTTTGCTTTTAGAATTAGATTAAAAGGGTAAGTATTTGTTCAAAAATTGTGATAACCTCGAAAATGGAAAACAAACAAGAAAAAATTTAAATTAAATCGTTTTTGTATAATGTATGCATCATGAATATTTGACAAACAAATGAAACAAATATATCTTCACCAAATAGTTTCCATTCTTTTATTATAACGATAGATCATGTCAAATATTGTTAAGTTAAGCCTTTACCAAAATAATTCAATCAACTGAATAGATTTTCTTAAGTTTTTGGCCCTAAATGTGTGTATGGATGTATGTATGTAAGTGCACCAAATGATGAAACATAACCAAAAAAATCTTATCCACAAACAATTGGATCTCATTTCATTTGAAAAAGAAAAAAAGAAGAGAAAAACAAAGACCCTCCATAGGGAAAAAAGGAAAATACTCCAAAACTATAAAACAGAGAAATCAAAACCAACCATTTTCTAAAAGATAGACACCAAAAGAACTCTCCCATGGCGGCAGCAGCAGCAGCTTCATCTTACATAATGTTTTCTATGGTGGGTTGGAAAAATGGCATACAAAACACAAAACACACACTCAGATTTCCCATCTCAGCTCAGATCAATGAAGCTGCAGAGCAACTAAAAGCTGGAGACCAGGAAGAAGATCAAGAACAGGCAAAGCCGAAACCGTCGCCGCTGCGGCCCGTGGAAGTACAACAGAATGTGAAGAGCAAAAACATGGGGAGAGAGTATGGAGGACAATGGCTTAGCAGTGTAACAAGACATGTAAGAATATATGCAGCTTACATTGACCCAATTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTCACTCTCCTTTTGGATCCAAGTAATGAGTTCCTTTGGAATCCTGAAACTTGCAATAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGTACTTTTCTTTCTCTCTCTTTCTTTAGTATTTTAGGATCCTTTGTTATATCATGGGTTAGCTCTGCCAAAACTTCAAATCGACCTATTTGTTAATAAAATAGGACTAGCTAATACTATACTAATTGAGCTAAAGAATGTATAAATACATTGATGTACTTTTATTGATTAAAGGTATGTATGGTTCAATTGACAAAACAACAATCGAAGCCCACAACATTTGACAGGGAAATTTTGTAAAATATATTTATATTCTAAACCAGGGTTTATTTGGTTAACTATTTGAGTCAAATTCTAAAAATAAAAATAAAAGAATTTGTGTAGTTTTTAAAACTTGCTTTCATTTTTTAAAACATCAAGTAGAAAATAGAAAACAATAAGAAATTGAAAAAGTAAATATTAACTAAACAAGATGTTAGTGAATTTGAAGGCAATAGATTATTTTATCGTCGTCCAAAAAGTTCGGTTCCAAGTCATCACCCTACTTGTTTTAGGTCTTAATTTTCATCCAAAATTTATAGTGTAATGATAGAAGGGCAATATTACTGACACACGTACGCATATTTTGTAATATAGATTTGTGAAGTTAGTGTGACAATTAAGTTATATTGATGGGGTGTGTGTTTATTTGTGGAAAACCAGGGAGCTCCATTGACAGAATATACACTTAGGCTAATAGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGGGTTCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAACGATCTACCGCAGGATGATCTACAATCAAAATAAATATTTTACAAATGTAATTAAATGTTGTCTTCCAAATAGAATCATAAATATTATTCACCTTCATCTCATTTTGATATTGCATCAATGCATAAACTCTACAAATTGTAGTTTTATACACCTTCAAAAGCTACTATATCATTGGGGAGAAACTACAATAAAGAAAAGAAAGACATGCCACTGTCCAGAGAAGGACCAAATTGAAATCTTCCAAATTGTAGTTTTATACCTTCAAAAGCTACTATATATCATAGACAACCTTTTGTTGACATCTTGAAACACTCAAAAGACCAAATTGAAACTATGAGCTAGTTCGGAGA ATGGCGGCAGCAGCAGCAGCTTCATCTTACATAATGTTTTCTATGGTGGGTTGGAAAAATGGCATACAAAACACAAAACACACACTCAGATTTCCCATCTCAGCTCAGATCAATGAAGCTGCAGAGCAACTAAAAGCTGGAGACCAGGAAGAAGATCAAGAACAGGCAAAGCCGAAACCGTCGCCGCTGCGGCCCGTGGAAGTACAACAGAATGTGAAGAGCAAAAACATGGGGAGAGAGTATGGAGGACAATGGCTTAGCAGTGTAACAAGACATGTAAGAATATATGCAGCTTACATTGACCCAATTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTCACTCTCCTTTTGGATCCAAGTAATGAGTTCCTTTGGAATCCTGAAACTTGCAATAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGGAGCTCCATTGACAGAATATACACTTAGGCTAATAGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGGGTTCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAACGATCTACCGCAGGATGATCTACAATCAAAATAA ATGGCGGCAGCAGCAGCAGCTTCATCTTACATAATGTTTTCTATGGTGGGTTGGAAAAATGGCATACAAAACACAAAACACACACTCAGATTTCCCATCTCAGCTCAGATCAATGAAGCTGCAGAGCAACTAAAAGCTGGAGACCAGGAAGAAGATCAAGAACAGGCAAAGCCGAAACCGTCGCCGCTGCGGCCCGTGGAAGTACAACAGAATGTGAAGAGCAAAAACATGGGGAGAGAGTATGGAGGACAATGGCTTAGCAGTGTAACAAGACATGTAAGAATATATGCAGCTTACATTGACCCAATTACTTGTGAGTTTGATCAAACTCAAATGGATAAACTCACTCTCCTTTTGGATCCAAGTAATGAGTTCCTTTGGAATCCTGAAACTTGCAATAAAGTCTATGCTTACTTCCAAGAGCTTGTGGATCATTATGAGGGAGCTCCATTGACAGAATATACACTTAGGCTAATAGGTTCAGACATAGAACACTACATAAGAAAGATGCTTTATGATGGAGAAATCAAGTACAATATGAATGCAAGGGTTCTCAACTTCAGCATGGGAAAGCCAAGAATTATGTTCAATGCCAACGATCTACCGCAGGATGATCTACAATCAAAATAA MAAAAAASSYIMFSMVGWKNGIQNTKHTLRFPISAQINEAAEQLKAGDQEEDQEQAKPKPSPLRPVEVQQNVKSKNMGREYGGQWLSSVTRHVRIYAAYIDPITCEFDQTQMDKLTLLLDPSNEFLWNPETCNKVYAYFQELVDHYEGAPLTEYTLRLIGSDIEHYIRKMLYDGEIKYNMNARVLNFSMGKPRIMFNANDLPQDDLQSK* Homology
BLAST of CsaV3_7G022180 vs. NCBI nr
Match: XP_004139803.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis sativus] >KGN44204.1 hypothetical protein Csa_016125 [Cucumis sativus]) HSP 1 Score: 425.6 bits (1093), Expect = 2.4e-115 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. NCBI nr
Match: XP_008447195.1 (PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucumis melo] >KAA0041980.1 NAD(P)H-quinone oxidoreductase subunit M [Cucumis melo var. makuwa] >TYK17916.1 NAD(P)H-quinone oxidoreductase subunit M [Cucumis melo var. makuwa]) HSP 1 Score: 414.1 bits (1063), Expect = 7.3e-112 Identity = 201/209 (96.17%), Postives = 205/209 (98.09%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. NCBI nr
Match: XP_038899189.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Benincasa hispida]) HSP 1 Score: 370.5 bits (950), Expect = 9.3e-99 Identity = 182/205 (88.78%), Postives = 192/205 (93.66%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. NCBI nr
Match: XP_022940621.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita moschata] >XP_023523685.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita pepo subsp. pepo] >KAG6607714.1 NAD(P)H-quinone oxidoreductase subunit M, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 368.2 bits (944), Expect = 4.6e-98 Identity = 181/205 (88.29%), Postives = 192/205 (93.66%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. NCBI nr
Match: XP_022981611.1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Cucurbita maxima]) HSP 1 Score: 365.9 bits (938), Expect = 2.3e-97 Identity = 182/207 (87.92%), Postives = 192/207 (92.75%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. ExPASy Swiss-Prot
Match: A7NVJ4 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Vitis vinifera OX=29760 GN=ndhM PE=2 SV=1) HSP 1 Score: 287.3 bits (734), Expect = 1.4e-76 Identity = 145/207 (70.05%), Postives = 170/207 (82.13%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. ExPASy Swiss-Prot
Match: A9PJQ8 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Populus jackii OX=640484 GN=ndhM PE=2 SV=1) HSP 1 Score: 275.0 bits (702), Expect = 7.0e-73 Identity = 140/204 (68.63%), Postives = 161/204 (78.92%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. ExPASy Swiss-Prot
Match: Q2V2S7 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ndhM PE=2 SV=1) HSP 1 Score: 255.8 bits (652), Expect = 4.4e-67 Identity = 121/164 (73.78%), Postives = 144/164 (87.80%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. ExPASy Swiss-Prot
Match: A2XVZ1 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. indica OX=39946 GN=ndhM PE=3 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 4.4e-59 Identity = 112/165 (67.88%), Postives = 132/165 (80.00%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. ExPASy Swiss-Prot
Match: Q7FB12 (NAD(P)H-quinone oxidoreductase subunit M, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=ndhM PE=2 SV=1) HSP 1 Score: 229.2 bits (583), Expect = 4.4e-59 Identity = 112/165 (67.88%), Postives = 132/165 (80.00%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. ExPASy TrEMBL
Match: A0A0A0K5H1 (NAD(P)H dehydrogenase subunit M OS=Cucumis sativus OX=3659 GN=Csa_7G221360 PE=3 SV=1) HSP 1 Score: 425.6 bits (1093), Expect = 1.2e-115 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. ExPASy TrEMBL
Match: A0A5D3D3P2 (NAD(P)H dehydrogenase subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold306G002070 PE=3 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 3.5e-112 Identity = 201/209 (96.17%), Postives = 205/209 (98.09%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. ExPASy TrEMBL
Match: A0A1S3BGV5 (NAD(P)H dehydrogenase subunit M OS=Cucumis melo OX=3656 GN=LOC103489705 PE=3 SV=1) HSP 1 Score: 414.1 bits (1063), Expect = 3.5e-112 Identity = 201/209 (96.17%), Postives = 205/209 (98.09%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. ExPASy TrEMBL
Match: A0A6J1FIZ9 (NAD(P)H dehydrogenase subunit M OS=Cucurbita moschata OX=3662 GN=LOC111446160 PE=3 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 2.2e-98 Identity = 181/205 (88.29%), Postives = 192/205 (93.66%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. ExPASy TrEMBL
Match: A0A6J1IX15 (NAD(P)H dehydrogenase subunit M OS=Cucurbita maxima OX=3661 GN=LOC111480680 PE=3 SV=1) HSP 1 Score: 365.9 bits (938), Expect = 1.1e-97 Identity = 182/207 (87.92%), Postives = 192/207 (92.75%), Query Frame = 0
BLAST of CsaV3_7G022180 vs. TAIR 10
Match: AT4G37925.1 (subunit NDH-M of NAD(P)H:plastoquinone dehydrogenase complex ) HSP 1 Score: 255.8 bits (652), Expect = 3.1e-68 Identity = 121/164 (73.78%), Postives = 144/164 (87.80%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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