CsaV3_7G016200 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTTAACTATTAGACTATTATCAATTCGGTTGACCCGACCCATCATGACGGAGTCTATTTAAAGCCCCGTGAAAGGCTTGGCAAAACCAACAGCGCCGAGATCGGCAAGCAAGGGCGAATTTTCCAATACTTTTTAGTTTTTTCCACAGTTTCTCTTCCAAATTTCTTTAATCTGTAACCATGTCTCAGGTGCGCCACTACGAATTTCTCGCTTCGTTTTTTATATGCAATTGTTTGAAGTTTGGTTTTCCGTTTTTCATCCTTATCTTTTGTTTCATTTCTCTATTTCTCTCCGTTTTTCGTATGCTTTGGAGATCGAAGATACGTTAGTTCGTCCCTTTTGAACTTCAAATCTGAAGTTTAGACCATGAATCGTTGATTTAAATTGGAGTAGAAGGTTTTTTTTTTTTTTTTTTGAAATTTTATCCACTCCATAACTTGAATCTGAGATGAGTGACGATGGAAATCACAGTAACCGAGCCAATGAGGTCAAAGTCCGAGAGAGCTCCATTGAAGTATTTCGTTAGTATCATATATTGACTGATTTGTTGTTTGGTAATTGGTTGATTAATCACAAAGAAAGCTTTACGTTGATCATATATCGATAATTTGCTCATTGATTGAGTGTCGTCCCGATTTGCAAAACTTGAATTTTCTGTACTGTTATGCGTTTTTTAATTATTGTTCTATGTTATTTCTGGGAACCTGAGCTGTTGATGAACGAGTGAGAATATCTATTGATATAATTCTTGGATACAAGTTCGGTTTGATAGAATTGGCTGAGTAAATTTCTATTGAAATTTTTGATAAGGGACGATTGATATTAAACTCTCTTGTCAAAATTTAGTGCTTGTGTGAGCTGAGCTAACTTTTATCTCTTGGTATCAGACATTCTGTTCTGTATTCAACTCGTTCTTTGATTTCATCTTAATGAATACAGTTTGGAATTTGTTTTTTGTGCAGACTACTGTCCTTAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGGGCCGTCAAAAGGGTCTTGGGAAAACTGGAAGGTTTGTAATTTATTTGGTAAATTGCAGTTTTTGTGATTTTCTATGCGATTGTTTGATGTGAAATATTTGTATCCGAGCGCGAGGGTCAAGTTATGGAGCTTCATATTGCATTTTTTAGATTCATGTTTCAATATTCAGCTGCTAGTTTGGTTGCTGCCACTTTTTCATAGTCCAGCCAGGTCATAACAGAAAACAGAAACTTAAAAATATATATATACAACACATAAAGTTCAGTTTGTCACATAGCACCCGTGTGATCGGGTCACAAGACCTTGTTTAACTGCAGCCCACCTAGCAGCAAAGTATTATTCTTCCGCTAATATGTGGTGTTTTGTATTTTGGGAAATGATGCACATATTATATTTGATCATGGTTCAATCTCAACAATCATATGCAAGCATGGTTATTTTTATTGCAAGTTTAGTTCTGTTTTATGTCCAAGACTGTCAATGGTATTTAGTGAACTCGAAGATCTGGTGGATCGATTACCCATGCGCCAGCGAATTCTTAAATGATGGTTAATTTTGTTGCAAGTTTACTTCTGTCTTAAACGTTTGCTGTAACCAATTGAATGTACCTACTGGCTACCATTTTCAGGAGTTGAGACGTATGACATCGACATTGATGCACAAAAGGTGACTGTGAAAGGAAATGTAGAGCGCGATGTAGTTTTCCAAACTGTTTCAAAAACTGGCAAGAAGACTGCCTACTGGGAAGAGGATGCCTCGGCAGCACCTGCAGCGACACCAGCACCGGCTGAAGCAGAAGCTAAACCTGCCGAGCCCCTGGCCGCTATTTAAACTATTCACCATTTACATAATGGAAATTTTCTGTTCAATGCATAAGGTCTTTATTTCCTGAAGCTAATAATATTGTAATTGTATGCAAAACTTGTCTATTTAGTCTATGTAATACTTTTATTTGAGCGTCTCTTGTATGACCGTCTACGTTAAATCTTAACCATAGTCTACAGATATATATATATATCTGTTTTGCCCAATCTCTTTGTTCCTTTCGACGTTTTGCTTTCGTATATAATTAATTGGCGACTCCAGGGAAAGATGCCTTCAATGGCTGTTATTGTTGTTTGAAATTATTCATTCCTGCTGATACAAATTTGATGCTGAATTGGGAAGTTGGTTGAATTTGTATTTTGGTGTTTGAGTTTATTTTACGTTTGTTGGATACTGAACAGAGTAAAAGAAGATTGATAGAATATTAGAAGAAGGTTTCG ATGTCTCAGACTACTGTCCTTAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGGGCCGTCAAAAGGGTCTTGGGAAAACTGGAAGGAGTTGAGACGTATGACATCGACATTGATGCACAAAAGGTGACTGTGAAAGGAAATGTAGAGCGCGATGTAGTTTTCCAAACTGTTTCAAAAACTGGCAAGAAGACTGCCTACTGGGAAGAGGATGCCTCGGCAGCACCTGCAGCGACACCAGCACCGGCTGAAGCAGAAGCTAAACCTGCCGAGCCCCTGGCCGCTATTTAA ATGTCTCAGACTACTGTCCTTAAGGTTGCTATGTCATGTCAAGGCTGTGTTGGGGCCGTCAAAAGGGTCTTGGGAAAACTGGAAGGAGTTGAGACGTATGACATCGACATTGATGCACAAAAGGTGACTGTGAAAGGAAATGTAGAGCGCGATGTAGTTTTCCAAACTGTTTCAAAAACTGGCAAGAAGACTGCCTACTGGGAAGAGGATGCCTCGGCAGCACCTGCAGCGACACCAGCACCGGCTGAAGCAGAAGCTAAACCTGCCGAGCCCCTGGCCGCTATTTAA MSQTTVLKVAMSCQGCVGAVKRVLGKLEGVETYDIDIDAQKVTVKGNVERDVVFQTVSKTGKKTAYWEEDASAAPAATPAPAEAEAKPAEPLAAI* Homology
BLAST of CsaV3_7G016200 vs. NCBI nr
Match: XP_004150491.1 (copper transport protein ATX1 [Cucumis sativus] >XP_031745275.1 copper transport protein ATX1-like [Cucumis sativus] >KAE8645958.1 hypothetical protein Csa_018219 [Cucumis sativus]) HSP 1 Score: 178.3 bits (451), Expect = 3.1e-41 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. NCBI nr
Match: KAE8648832.1 (hypothetical protein Csa_008416 [Cucumis sativus]) HSP 1 Score: 172.9 bits (437), Expect = 1.3e-39 Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. NCBI nr
Match: XP_008446769.1 (PREDICTED: copper transport protein ATX1-like [Cucumis melo] >KAA0034661.1 copper transport protein ATX1-like [Cucumis melo var. makuwa] >TYK09212.1 copper transport protein ATX1-like [Cucumis melo var. makuwa]) HSP 1 Score: 172.6 bits (436), Expect = 1.7e-39 Identity = 91/94 (96.81%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. NCBI nr
Match: XP_038893429.1 (copper transport protein ATX1-like [Benincasa hispida]) HSP 1 Score: 156.8 bits (395), Expect = 9.6e-35 Identity = 87/100 (87.00%), Postives = 90/100 (90.00%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. NCBI nr
Match: XP_022968572.1 (copper transport protein ATX1-like isoform X3 [Cucurbita maxima]) HSP 1 Score: 147.5 bits (371), Expect = 5.8e-32 Identity = 84/109 (77.06%), Postives = 91/109 (83.49%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. ExPASy Swiss-Prot
Match: O82089 (Copper transport protein CCH OS=Arabidopsis thaliana OX=3702 GN=CCH PE=1 SV=1) HSP 1 Score: 114.8 bits (286), Expect = 5.5e-25 Identity = 59/81 (72.84%), Postives = 66/81 (81.48%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. ExPASy Swiss-Prot
Match: Q94BT9 (Copper transport protein ATX1 OS=Arabidopsis thaliana OX=3702 GN=ATX1 PE=1 SV=2) HSP 1 Score: 111.7 bits (278), Expect = 4.7e-24 Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. ExPASy Swiss-Prot
Match: B3H6D0 (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1) HSP 1 Score: 66.2 bits (160), Expect = 2.2e-10 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. ExPASy Swiss-Prot
Match: Q84J88 (Heavy metal-associated isoprenylated plant protein 36 OS=Arabidopsis thaliana OX=3702 GN=HIPP36 PE=1 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 3.2e-09 Identity = 27/64 (42.19%), Postives = 44/64 (68.75%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. ExPASy Swiss-Prot
Match: F4JZL7 (Heavy metal-associated isoprenylated plant protein 33 OS=Arabidopsis thaliana OX=3702 GN=HIPP33 PE=2 SV=1) HSP 1 Score: 60.5 bits (145), Expect = 1.2e-08 Identity = 31/65 (47.69%), Postives = 41/65 (63.08%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. ExPASy TrEMBL
Match: A0A0A0KTF7 (Copper chaperone OS=Cucumis sativus OX=3659 GN=Csa_5G615220 PE=4 SV=1) HSP 1 Score: 178.3 bits (451), Expect = 1.5e-41 Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. ExPASy TrEMBL
Match: A0A5A7SZ31 (Copper transport protein ATX1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold475G002050 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 8.2e-40 Identity = 91/94 (96.81%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. ExPASy TrEMBL
Match: A0A1S3BFW4 (copper transport protein ATX1-like OS=Cucumis melo OX=3656 GN=LOC103489398 PE=4 SV=1) HSP 1 Score: 172.6 bits (436), Expect = 8.2e-40 Identity = 91/94 (96.81%), Postives = 94/94 (100.00%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. ExPASy TrEMBL
Match: A0A6J1HTV3 (copper transport protein ATX1-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111467756 PE=4 SV=1) HSP 1 Score: 147.5 bits (371), Expect = 2.8e-32 Identity = 84/109 (77.06%), Postives = 91/109 (83.49%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. ExPASy TrEMBL
Match: A0A6J1DBD6 (copper transport protein ATX1 OS=Momordica charantia OX=3673 GN=LOC111018750 PE=4 SV=1) HSP 1 Score: 147.1 bits (370), Expect = 3.7e-32 Identity = 80/96 (83.33%), Postives = 88/96 (91.67%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. TAIR 10
Match: AT3G56240.1 (copper chaperone ) HSP 1 Score: 114.8 bits (286), Expect = 3.9e-26 Identity = 59/81 (72.84%), Postives = 66/81 (81.48%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. TAIR 10
Match: AT1G66240.1 (homolog of anti-oxidant 1 ) HSP 1 Score: 111.7 bits (278), Expect = 3.3e-25 Identity = 54/76 (71.05%), Postives = 65/76 (85.53%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. TAIR 10
Match: AT1G66240.2 (homolog of anti-oxidant 1 ) HSP 1 Score: 98.2 bits (243), Expect = 3.8e-21 Identity = 46/66 (69.70%), Postives = 56/66 (84.85%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. TAIR 10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 66.2 bits (160), Expect = 1.6e-11 Identity = 30/61 (49.18%), Postives = 42/61 (68.85%), Query Frame = 0
BLAST of CsaV3_7G016200 vs. TAIR 10
Match: AT5G27690.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 62.4 bits (150), Expect = 2.3e-10 Identity = 27/64 (42.19%), Postives = 44/64 (68.75%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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