CsaV3_7G003830 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G003830
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Unknown protein
Location	chr7: 2842435 .. 2842647 (+)
RNA-Seq Expression	CsaV3_7G003830
Synteny	CsaV3_7G003830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGTATCAGGTGGAGGTGGGGAAATCGGAATAGTGTCAGGCGGAGGTGGAGAAGTTGGAATAACGTCAGGTGGAGGTGGGGAAGCCGGAGTAGCGTCAGGTGGAGGTGGGGAAGCTGAAGTAGCGTCAGACGGAGGCGGAAAAGCAGGAATCGAATTTTGGGGTGGTGGGTTTGGATTAGAATACGATGGGTTGGGTGGGTTCTGTGGCTGA

mRNA sequence

ATGGTATCAGGTGGAGGTGGGGAAATCGGAATAGTGTCAGGCGGAGGTGGAGAAGTTGGAATAACGTCAGGTGGAGGTGGGGAAGCCGGAGTAGCGTCAGGTGGAGGTGGGGAAGCTGAAGTAGCGTCAGACGGAGGCGGAAAAGCAGGAATCGAATTTTGGGGTGGTGGGTTTGGATTAGAATACGATGGGTTGGGTGGGTTCTGTGGCTGA

Coding sequence (CDS)

ATGGTATCAGGTGGAGGTGGGGAAATCGGAATAGTGTCAGGCGGAGGTGGAGAAGTTGGAATAACGTCAGGTGGAGGTGGGGAAGCCGGAGTAGCGTCAGGTGGAGGTGGGGAAGCTGAAGTAGCGTCAGACGGAGGCGGAAAAGCAGGAATCGAATTTTGGGGTGGTGGGTTTGGATTAGAATACGATGGGTTGGGTGGGTTCTGTGGCTGA

Protein sequence

MVSGGGGEIGIVSGGGGEVGITSGGGGEAGVASGGGGEAEVASDGGGKAGIEFWGGGFGLEYDGLGGFCG*

Homology

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BLAST of CsaV3_7G003830 vs. NCBI nr
Match: KAE8645748.1 (hypothetical protein Csa_020199 [Cucumis sativus])

HSP 1 Score: 119.8 bits (299), Expect = 9.7e-24
Identity = 70/70 (100.00%), Postives = 70/70 (100.00%), Query Frame = 0


Query: 1  MVSGGGGEIGIVSGGGGEVGITSGGGGEAGVASGGGGEAEVASDGGGKAGIEFWGGGFGL 60
          MVSGGGGEIGIVSGGGGEVGITSGGGGEAGVASGGGGEAEVASDGGGKAGIEFWGGGFGL
Sbjct: 1  MVSGGGGEIGIVSGGGGEVGITSGGGGEAGVASGGGGEAEVASDGGGKAGIEFWGGGFGL 60

Query: 61 EYDGLGGFCG 71
          EYDGLGGFCG
Sbjct: 61 EYDGLGGFCG 70

The following BLAST results are available for this feature:

BLAST of CsaV3_7G003830 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645748.1	9.7e-24	100.00	hypothetical protein Csa_020199 [Cucumis sativus]	[more]

BLAST of CsaV3_7G003830 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G003830 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_7G003830 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 20..44

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G003830.1	CsaV3_7G003830.1	mRNA