CsaV3_7G002260 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_7G002260
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	AP complex subunit sigma
Location	chr7: 1782975 .. 1787261 (+)
RNA-Seq Expression	CsaV3_7G002260
Synteny	CsaV3_7G002260

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CATGGAGTAAACAACCCTACAAGCAGGTAGATTTATTAGCACAGAGTCAGGTTGTTGGGTACAGCAAGATTAGTCAGTAATATATGGTTTTTCATCTTTACAAATATAAAATTAAGCTTTGCAAACCCAATATTTATAAATCCCATAATATATTATGAGTCAAATATCCTTGATTGGTTATATTCCTCCAAAAGTCAAGGCCTGAAGTCAACCACCACCTGAATATGGTAAGCCAAGTTTGTACTATAAAAATGCCTTTGCTTCTTCCATTTTTCAGAAACCAACAAAAAGGAGAAATAGAAGAAGAAGCTGCTGGTCTTGTGTGTTTTGGCAGAATGATAGGCATGGCATTATGCAGAGGTTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTTCGAGCATGTTCGACATTCTATCGGGTCGAACGTGTCAGATGCTCACGACAGCGTCGCTGCCATGTGAGGTAAAACTTCTGGTTTGTAGGTTCGAAGAGCTGCAGCGTGCAGTTGGATCAGAGGAGGAAATTTGCTCTGTTTGCTTGACGGAGTTCACCAGAGAGCATTTGGTGAGCCAATTGCATAGATGTAGCCATGTTTTCCACCTAGAATGTATTGAGAGTTGGCTACAAAGAAACCAATTTACCTGCCCTCTCTGCAGATCCTTCATCTTCCAACCATTGTGAATCTTTTAGAATCTCAATTTGGCTGTTTCGAAAAGATATAGTTCAACTAGTATGACAAAATTGTGTTGTTGATTATATTGATGGATAGATTGTTGAATGTGACTATTGGAGTCGAAAGTTCTTAGTTTGATATCCATCTTATCCAACTAAAAAAATAGGTACAAATTTGTTTTGTTAGCCATTTTTGTTTATTTATTTATTTGTTTTTCAAATGTTTTCTTTTTTCCCTTTGTCTTTTTTTATAGTTAAAGGGTTATGACTTTAAAGTATTTTTTTGGTAAGTCATCTTTTAAAGCAAATAAATAATTGAGTGGACTATTTGGATGGCCTATTAATTATTTTATAATTCTTTATATAACAAAAATTTAATCCTAATCCTATAACATGTTTCAACAAGCTTTCTATATATATTCTTAATAGAGTATTTTATAAACTATCATTAAAACAATTATTTTGAATATCAAACCTAACATGATTGAACAAACTTTTTATATATTCTTAACCTGTTAGTTCAATTGTATGACTTTAACTAATGTAAAAATACAAATATTTGATTGATTCACAACTTAACACGTATGTCATTGTATTAATATGGGTCCTTGCAAAAATAGCAAATTTAAAACCTGATAATCTTATTACACCTTTACCATATGATAATCACTTTTTTACTTTGCTGAGTTGGTTTTTTTAAAATGTTTTTGTTATATGATGCAATTTTTCTTAATATTAATTAAATCGAGACGGATGCTAGGGGCCGGTTTGGGAATAAGATTTCTTTTTTTTTCTTAATATTTTATTTCCACGCGCTCACATACGCTGATAAAAAGGTCAACGTTTTTAAAATTAATTTTAAAATGTCAACGACTTGATAATTCTAATAGTCAACGATCCATTGAACTCAAAGGATGGACTAAAGAGATCCGAGAAGATTTGAGTTTGGGCCTGTAGTTCTTTTGTATAGAAAGCTCCAAGGCCCATTAGTAGGCCCAATCGTTCGTACTAAAGGGTCTAACCCGGCCCGGTCCGGCCCGAGCCCAAAGCTTTGGCGGGTAGGAATTCCGAACAAAATATAATTTACGGCAGAACGACGGAGGGGAAGAAGCTTTACTGTGATCAGAGAGATCGAATTTTTGTTGAGGATTTTGGCTTTGAGATTGCTGGTTCTTGAAACTTCATAACAAAATGGTATGTGATTTCATTGCTTTGATTCATTTCTTGATTCTGATTGTTTCAAGGTTGTAATTGTGTTGTTCAGTGCGTTTGAGTCTTCCTCATCGTGGATCTGATTTGGTCTTTCTTTATGGGATGGATTAATTGGCTCCTTTCATGCTTCTGAATTGTTGTTTTGTTCTTGATTTGATTTTCTGTGGTTTTCGTTGTTGTATGATTCAGATCTTTGCTTAGCTGACATTCGAATTTTTGCTCAATTTCGTTTCTATTTGTTGTTTGATATGTCGTGCTGGTTCCTTTATGTGGCTGCATAACATCTTGGATTTCAGGAATGGTTCTTTAATCTTAGGGAAGATTTAGTCTTACTATAGGTGGTTTGGTTGTGTCTCTCTTGGGCGGAGCTATTTATTCTCTGTTGAGCTAATAATGTTAGGTGCAAACAAATACCTAAATTGGTCAGGGAAGGTAGTGCTCCTGTATATATAAGTTAGGATAATTAGTCAGGATAATTCTCTCCTTTGATATAAGCCTTTAGAGTGATTCAAAAAACAAAGTCGTTAGAGTTTATGCTCGAGATGGTCATAAGGGTGGAACAATATCATACCATCACAGAGATATGTGAGATTCTATTGTCCTTGACTAGACTGGAGAAGTGGCAATTCTTGTTTCATTTCGTTTGTTTCAGCCATGAATTGCTGAATTTCTTGCTCTCTTCTCAAGGACTTTTGTCAATTACCCATAAGTTTTTACTATTGTGGGCTGGATTCCTTTTTGTATGTCTTAGTTTTTTGGCATCTTTGGTTTGAGGTGTTTTTTGTATCCTCTTTAGCCTTTTCTCTTGCATTCTTTCATTTCTTTTTCAATGAAAGCTTGGTTTGTCATAAAACAGTTGTTCTCCTCTTTCCTGGTGCAATTTAAGTTGGTTTATATCTTCAAATTTTGTGTCCTTAAAGATGACCTATTCAATATCTTACATGGTTTTCTTAATAAAAACAACTGCTTTCATTGAGAAAAAAAACGAAAGAATACAAGGAGCTCTAACTGATGTTCTTGATGTAAATTCCAGATTCACTTTGTGCTTCTTATAAGTAGACAAGGAAAAGTGAGGTTGACAAAATGGTATTCTCCATATACTCAGAAGGAGAGATCTAAGGTAGGTCAGCTATTTTCCTCATTCTGTAATTTAATGCTAATAGCTTCATTCAATTTTCAAGCAATGAGAATATTTGCAAAAACATGTTTCCTTTCCATAAAGTTTATTTATTACCTTAATAAGACTTAATTCCCCTAGGATCTATTTGACTTACCACATTATGACATGTGTTTGTGGCTGCTTATGTTCTTTAAACAGGTTATCCGTGAGCTTAGTGGAATGATTCTAAATCGAGGGCCTAAGCTTTGTAACTTTGTGGAATGGAGGGGACTGAAAGCTGTCTATAAACGGTACTTCCTGGTTTATTGATGTGTTCTGCAACCCAAATTTTTAATTTTGTCCATGTTGTCAGTTCTAAATATGATAAATGATTCTACTGGACATGCGATGCAGATACGCTAGTCTTTACTTTTGCATGTGCATTGATCAGGAAGACAATGAATTAGAGGTCCTTGAAATTATTCATCATTACGTTGAGATTTTGGACCGTTACTTTGGCAGTGTAAGTGAATTCAGTTTTATTTCATAAGTTGTTTGAAATTATTCTTCTTGCACCCCCCTCTTTAATTGATTACCTAAACTGACACTTAATTTTTCTTTATTATGATCTTTCATTTATGTCTGTAGGTCTGTGAATTGGATTTGATCTTCAACTTTCACAAGGTAGTATTCACTTGTTTATATAAAATATGCACCTTCTCTTTAATATGCATTTCATTCTCTGAATTACTTGCACCTTAGCTTCTGACCATTGAATATTTCTTGGTTGGATGTTCGCACTCTTTATACGAAACTTTAAATGCAATTTTAACATTGCAGGCCTATTACATATTGGATGAGCTTCTAATCGCTGGCGAACTCCAAGAGTCAAGCAAGAAAACAGTAGCAAGATTGATAGCCGCACAGGTACTCTCTCCTTCTATCTTTGCAATACCTTAGTTAAGATTTCTTGTTTTTATGAGAAGCATTCAACAATAATCTCATTGATAGAATGGAATTACAAAAGAGCAAATGCACTGTGAGAGTTACATATTACTTTTTCCAATGTGCAACAAGGGGGGAAATAAGCCTGTAATCACAAAAGTAGAAAATTCACACCAAGACAGAGAAGTATACCTTCGTTAAGATTTTAATTTAGCTGACCATATGGTAATTGGTATATGATTGTAGGATTCGTTGGTGGAGACTGCAAAGGAGCAAGCTAGTTCAATTAGTAACATAATTGCACAGGCCACCAAGTAG

mRNA sequence

ATGGTAAGCCAAGTTTGTACTATAAAAATGCCTTTGCTTCTTCCATTTTTCAGAAACCAACAAAAAGGAGAAATAGAAGAAGAAGCTGCTGGTCTTGTGTGTTTTGGCAGAATGATAGGCATGGCATTATGCAGAGGTTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTTCGAGCATGTTCGACATTCTATCGGGTCGAACGTGTCAGATGCTCACGACAGCGTCGCTGCCATGTGAGGTAAAACTTCTGGTTTGTAGGTTCGAAGAGCTGCAGCGTGCAGTTGGATCAGAGGAGGAAATTTGCTCTGTTTGCTTGACGGAGTTCACCAGAGAGCATTTGTTAAAGGGTTATGACTTTAAAATTCACTTTGTGCTTCTTATAAGTAGACAAGGAAAAGTGAGGTTGACAAAATGGTATTCTCCATATACTCAGAAGGAGAGATCTAAGGTTATCCGTGAGCTTAGTGGAATGATTCTAAATCGAGGGCCTAAGCTTTGTAACTTTGTGGAATGGAGGGGACTGAAAGCTGTCTATAAACGATACGCTAGTCTTTACTTTTGCATGTGCATTGATCAGGAAGACAATGAATTAGAGGTCCTTGAAATTATTCATCATTACGTTGAGATTTTGGACCGTTACTTTGGCAGTGTCTGTGAATTGGATTTGATCTTCAACTTTCACAAGGCCTATTACATATTGGATGAGCTTCTAATCGCTGGCGAACTCCAAGAGTCAAGCAAGAAAACAGTAGCAAGATTGATAGCCGCACAGGATTCGTTGGTGGAGACTGCAAAGGAGCAAGCTAGTTCAATTAGTAACATAATTGCACAGGCCACCAAGTAG

Coding sequence (CDS)

ATGGTAAGCCAAGTTTGTACTATAAAAATGCCTTTGCTTCTTCCATTTTTCAGAAACCAACAAAAAGGAGAAATAGAAGAAGAAGCTGCTGGTCTTGTGTGTTTTGGCAGAATGATAGGCATGGCATTATGCAGAGGTTCAATGTCCATGGCCACCATTGTCTTCTTAACTTGTGTGTGGATCCCTTTGAGCCAACTGAAGGCAGCCATTTCGAGCATGTTCGACATTCTATCGGGTCGAACGTGTCAGATGCTCACGACAGCGTCGCTGCCATGTGAGGTAAAACTTCTGGTTTGTAGGTTCGAAGAGCTGCAGCGTGCAGTTGGATCAGAGGAGGAAATTTGCTCTGTTTGCTTGACGGAGTTCACCAGAGAGCATTTGTTAAAGGGTTATGACTTTAAAATTCACTTTGTGCTTCTTATAAGTAGACAAGGAAAAGTGAGGTTGACAAAATGGTATTCTCCATATACTCAGAAGGAGAGATCTAAGGTTATCCGTGAGCTTAGTGGAATGATTCTAAATCGAGGGCCTAAGCTTTGTAACTTTGTGGAATGGAGGGGACTGAAAGCTGTCTATAAACGATACGCTAGTCTTTACTTTTGCATGTGCATTGATCAGGAAGACAATGAATTAGAGGTCCTTGAAATTATTCATCATTACGTTGAGATTTTGGACCGTTACTTTGGCAGTGTCTGTGAATTGGATTTGATCTTCAACTTTCACAAGGCCTATTACATATTGGATGAGCTTCTAATCGCTGGCGAACTCCAAGAGTCAAGCAAGAAAACAGTAGCAAGATTGATAGCCGCACAGGATTCGTTGGTGGAGACTGCAAAGGAGCAAGCTAGTTCAATTAGTAACATAATTGCACAGGCCACCAAGTAG

Protein sequence

MVSQVCTIKMPLLLPFFRNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLTEFTREHLLKGYDFKIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK*

Homology

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BLAST of CsaV3_7G002260 vs. NCBI nr
Match: KAE8645705.1 (hypothetical protein Csa_020389 [Cucumis sativus])

HSP 1 Score: 580.5 bits (1495), Expect = 8.3e-162
Identity = 294/294 (100.00%), Postives = 294/294 (100.00%), Query Frame = 0


Query: 1   MVSQVCTIKMPLLLPFFRNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVW 60
           MVSQVCTIKMPLLLPFFRNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVW
Sbjct: 1   MVSQVCTIKMPLLLPFFRNQQKGEIEEEAAGLVCFGRMIGMALCRGSMSMATIVFLTCVW 60

Query: 61  IPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLT 120
           IPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLT
Sbjct: 61  IPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRAVGSEEEICSVCLT 120

Query: 121 EFTREHLLKGYDFKIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLC 180
           EFTREHLLKGYDFKIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLC
Sbjct: 121 EFTREHLLKGYDFKIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLC 180

Query: 181 NFVEWRGLKAVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNF 240
           NFVEWRGLKAVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNF
Sbjct: 181 NFVEWRGLKAVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNF 240

Query: 241 HKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 295
           HKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK
Sbjct: 241 HKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 294

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BLAST of CsaV3_7G002260 vs. NCBI nr
Match: KAA0050549.1 (AP-1 complex subunit sigma-2 [Cucumis melo var. makuwa] >TYK18789.1 AP-1 complex subunit sigma-2 [Cucumis melo var. makuwa])

HSP 1 Score: 446.0 bits (1146), Expect = 2.4e-121
Identity = 230/247 (93.12%), Postives = 236/247 (95.55%), Query Frame = 0


Query: 48  MSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRA 107
           MSMAT+VFLTCVWIPLSQLKAAI+SMFDILSGRTC MLTT  +PCEVKLLVCRFEELQR 
Sbjct: 1   MSMATVVFLTCVWIPLSQLKAAIASMFDILSGRTCPMLTT--VPCEVKLLVCRFEELQRG 60

Query: 108 VGSEEEICSVCLTEFTREHLLKGYDFKIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRE 167
           VGSEEEICS+CLTEFTREHL       IHFVLLISRQGKVRLTKWYSPY+QKERSKVIRE
Sbjct: 61  VGSEEEICSICLTEFTREHL-------IHFVLLISRQGKVRLTKWYSPYSQKERSKVIRE 120

Query: 168 LSGMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRY 227
           LSGMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQ+DNELEVLEIIHHYVEILDRY
Sbjct: 121 LSGMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQDDNELEVLEIIHHYVEILDRY 180

Query: 228 FGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISN 287
           FGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISN
Sbjct: 181 FGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISN 238

Query: 288 IIAQATK 295
           IIAQATK
Sbjct: 241 IIAQATK 238

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BLAST of CsaV3_7G002260 vs. NCBI nr
Match: KAG6589096.1 (AP-1 complex subunit sigma-2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 410.6 bits (1054), Expect = 1.1e-110
Identity = 215/257 (83.66%), Postives = 223/257 (86.77%), Query Frame = 0


Query: 38  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLL 97
           MI +AL RG   +ATIV  TCVWIPL QLK  + SM  ILSGRT Q LT   LPCEVKL 
Sbjct: 1   MISLALGRGPTCVATIVLFTCVWIPLCQLKTFLESMIGILSGRTYQQLTMELLPCEVKLP 60

Query: 98  VCRFEELQRAVGSEEEICSVCLTEFTREHLLKGYDFKIHFVLLISRQGKVRLTKWYSPYT 157
           VCRF+EL R   SEE+ICSVCL  FT E L K     IHFVLLISRQGKVRLTKWYSPY+
Sbjct: 61  VCRFKELHRGSASEEDICSVCLAGFTGEDLTK----MIHFVLLISRQGKVRLTKWYSPYS 120

Query: 158 QKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQEDNELEVLEII 217
           QKERSKVIRELSGMILNR PKLCNFVEWRGLKAVYKRYASLYFC+CIDQEDNELE+LEII
Sbjct: 121 QKERSKVIRELSGMILNRAPKLCNFVEWRGLKAVYKRYASLYFCLCIDQEDNELEILEII 180

Query: 218 HHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVET 277
           HHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVET
Sbjct: 181 HHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVET 240

Query: 278 AKEQASSISNIIAQATK 295
           AKEQASSISNIIAQATK
Sbjct: 241 AKEQASSISNIIAQATK 253

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BLAST of CsaV3_7G002260 vs. NCBI nr
Match: KAG7022803.1 (AP-1 complex subunit sigma-2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 408.7 bits (1049), Expect = 4.3e-110
Identity = 214/257 (83.27%), Postives = 222/257 (86.38%), Query Frame = 0


Query: 38  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLL 97
           MI +AL RG   +ATIV  TCVWIPL QLK  + SM  ILSGRT Q LT   LPCEVKL 
Sbjct: 1   MISLALGRGPTCVATIVLFTCVWIPLCQLKTFLESMIGILSGRTYQQLTMELLPCEVKLP 60

Query: 98  VCRFEELQRAVGSEEEICSVCLTEFTREHLLKGYDFKIHFVLLISRQGKVRLTKWYSPYT 157
           VCRFEEL R   SEE+ICSVCL  +T E L       IHFVLLISRQGKVRLTKWYSPY+
Sbjct: 61  VCRFEELHRGSASEEDICSVCLAGYTGEDL-------IHFVLLISRQGKVRLTKWYSPYS 120

Query: 158 QKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQEDNELEVLEII 217
           QKERSKVIRELSGMILNR PKLCNFVEWRGLKAVYKRYASLYFC+CIDQEDNELE+LEII
Sbjct: 121 QKERSKVIRELSGMILNRAPKLCNFVEWRGLKAVYKRYASLYFCLCIDQEDNELEILEII 180

Query: 218 HHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVET 277
           HHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVET
Sbjct: 181 HHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVET 240

Query: 278 AKEQASSISNIIAQATK 295
           AKEQASSISNIIAQATK
Sbjct: 241 AKEQASSISNIIAQATK 250

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BLAST of CsaV3_7G002260 vs. NCBI nr
Match: KAF3434927.1 (hypothetical protein FNV43_RR22014 [Rhamnella rubrinervis])

HSP 1 Score: 338.6 bits (867), Expect = 5.5e-89
Identity = 184/265 (69.43%), Postives = 206/265 (77.74%), Query Frame = 0


Query: 38  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLL 97
           MI +   +  +S A IVF TCVWIP  QLK A   +  +    TC      S   +  L 
Sbjct: 1   MICLVGSQSHLSTAAIVFCTCVWIPFLQLKRAFFRILGLFFS-TCGEQPLESCCSKTFLP 60

Query: 98  VCRFEELQRAVGSE--------EEICSVCLTEFTREHLLKGYDFKIHFVLLISRQGKVRL 157
           V RF +L     SE        +E CS+CL +F +E ++     KIHFVLLISRQGKVRL
Sbjct: 61  VGRFVDLGSCRRSEGISNGEEVDESCSICLVDFDKEDVVS----KIHFVLLISRQGKVRL 120

Query: 158 TKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQEDN 217
           TKWYSPY+QKER+KV+RELSG+IL+RGPKLCNFVEWRG K VYKRYASLYFCMCID+EDN
Sbjct: 121 TKWYSPYSQKERTKVLRELSGVILSRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDREDN 180

Query: 218 ELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIA 277
           ELE+LEIIHH+VEILDRYFGSVCELDLIFNFHKAYYILDE+LIAGELQESSKKTVARLIA
Sbjct: 181 ELEILEIIHHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIA 240

Query: 278 AQDSLVETAKEQASSISNIIAQATK 295
           AQDSLVETAKEQASSISNIIAQATK
Sbjct: 241 AQDSLVETAKEQASSISNIIAQATK 260

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BLAST of CsaV3_7G002260 vs. ExPASy Swiss-Prot
Match: Q8LEZ8 (AP-1 complex subunit sigma-1 OS=Arabidopsis thaliana OX=3702 GN=AAP19-1 PE=1 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.7e-80
Identity = 148/160 (92.50%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 135 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 194
           IHFVLL+SRQGKVRLTKWYSPYTQKERSKVIRELSG+ILNRGPKLCNF+EWRG K VYKR
Sbjct: 2   IHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYKR 61

Query: 195 YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 254
           YASLYFCMCID+ DNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG
Sbjct: 62  YASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 121

Query: 255 ELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 295
           ELQESSKKTVAR+I+AQD LVE AKE+ASSISNIIAQATK
Sbjct: 122 ELQESSKKTVARIISAQDQLVEVAKEEASSISNIIAQATK 161

[Close]

BLAST of CsaV3_7G002260 vs. ExPASy Swiss-Prot
Match: O23685 (AP-1 complex subunit sigma-2 OS=Arabidopsis thaliana OX=3702 GN=AAP19-2 PE=2 SV=1)

HSP 1 Score: 300.8 bits (769), Expect = 1.7e-80
Identity = 149/159 (93.71%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 135 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 194
           IHFVLL+SRQGKVRLTKWYSPY QKERSKVIRELSG+ILNRGPKLCNFVEWRG K VYKR
Sbjct: 2   IHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYKR 61

Query: 195 YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 254
           YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG
Sbjct: 62  YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 121

Query: 255 ELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQAT 294
           ELQESSKKTVAR+I+AQD LVE AKE+ASSISNIIAQAT
Sbjct: 122 ELQESSKKTVARIISAQDQLVEVAKEEASSISNIIAQAT 160

[Close]

BLAST of CsaV3_7G002260 vs. ExPASy Swiss-Prot
Match: B0G185 (AP-1 complex subunit sigma-2 OS=Dictyostelium discoideum OX=44689 GN=ap1s2 PE=3 SV=1)

HSP 1 Score: 228.0 bits (580), Expect = 1.4e-58
Identity = 105/141 (74.47%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 136 HFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKRY 195
           HF+LL+SRQGK RLTKWYSP+T KE+S+  RE+  M+LNR PKLCNF+EW+  K ++KRY
Sbjct: 4   HFLLLLSRQGKTRLTKWYSPFTNKEKSRFTREIGNMVLNRPPKLCNFLEWKEYKIIFKRY 63

Query: 196 ASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGE 255
           ASLYF +C D+EDNEL VLEIIHH+VEILDRYFG+VCELDLIFNFHKAYYILDEL++AGE
Sbjct: 64  ASLYFVVCCDREDNELIVLEIIHHFVEILDRYFGNVCELDLIFNFHKAYYILDELIMAGE 123

Query: 256 LQESSKKTVARLIAAQDSLVE 277
           LQE+SKKTV RLI+ QD+L+E
Sbjct: 124 LQETSKKTVLRLISQQDTLLE 144

[Close]

BLAST of CsaV3_7G002260 vs. ExPASy Swiss-Prot
Match: Q3ZBS3 (AP-1 complex subunit sigma-2 OS=Bos taurus OX=9913 GN=AP1S2 PE=2 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 9.8e-49
Identity = 93/146 (63.70%), Postives = 113/146 (77.40%), Query Frame = 0


Query: 135 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 194
           + F+LL SRQGK+RL KWY P + KE+ K+ REL   +L R PK+C+F+EWR LK VYKR
Sbjct: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60

Query: 195 YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 254
           YASLYFC  I+ +DNEL  LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G
Sbjct: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120

Query: 255 ELQESSKKTVARLIAAQDSLVETAKE 281
           E+QE+SKK V + I   D L E AKE
Sbjct: 121 EVQETSKKNVLKAIEQADLLQEDAKE 146

[Close]

BLAST of CsaV3_7G002260 vs. ExPASy Swiss-Prot
Match: Q9DB50 (AP-1 complex subunit sigma-2 OS=Mus musculus OX=10090 GN=Ap1s2 PE=1 SV=1)

HSP 1 Score: 195.3 bits (495), Expect = 9.8e-49
Identity = 93/146 (63.70%), Postives = 113/146 (77.40%), Query Frame = 0


Query: 135 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 194
           + F+LL SRQGK+RL KWY P + KE+ K+ REL   +L R PK+C+F+EWR LK VYKR
Sbjct: 1   MQFMLLFSRQGKLRLQKWYVPLSDKEKKKITRELVQTVLARKPKMCSFLEWRDLKIVYKR 60

Query: 195 YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 254
           YASLYFC  I+ +DNEL  LEIIH YVE+LD+YFGSVCELD+IFNF KAY+ILDE L+ G
Sbjct: 61  YASLYFCCAIEDQDNELITLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDEFLLGG 120

Query: 255 ELQESSKKTVARLIAAQDSLVETAKE 281
           E+QE+SKK V + I   D L E AKE
Sbjct: 121 EVQETSKKNVLKAIEQADLLQEDAKE 146

[Close]

BLAST of CsaV3_7G002260 vs. ExPASy TrEMBL
Match: A0A5D3D5G1 (AP-1 complex subunit sigma-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold945G00010 PE=3 SV=1)

HSP 1 Score: 446.0 bits (1146), Expect = 1.2e-121
Identity = 230/247 (93.12%), Postives = 236/247 (95.55%), Query Frame = 0


Query: 48  MSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQRA 107
           MSMAT+VFLTCVWIPLSQLKAAI+SMFDILSGRTC MLTT  +PCEVKLLVCRFEELQR 
Sbjct: 1   MSMATVVFLTCVWIPLSQLKAAIASMFDILSGRTCPMLTT--VPCEVKLLVCRFEELQRG 60

Query: 108 VGSEEEICSVCLTEFTREHLLKGYDFKIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRE 167
           VGSEEEICS+CLTEFTREHL       IHFVLLISRQGKVRLTKWYSPY+QKERSKVIRE
Sbjct: 61  VGSEEEICSICLTEFTREHL-------IHFVLLISRQGKVRLTKWYSPYSQKERSKVIRE 120

Query: 168 LSGMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRY 227
           LSGMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQ+DNELEVLEIIHHYVEILDRY
Sbjct: 121 LSGMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQDDNELEVLEIIHHYVEILDRY 180

Query: 228 FGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISN 287
           FGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISN
Sbjct: 181 FGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISN 238

Query: 288 IIAQATK 295
           IIAQATK
Sbjct: 241 IIAQATK 238

[Close]

BLAST of CsaV3_7G002260 vs. ExPASy TrEMBL
Match: A0A7J6EPV4 (Clat_adaptor_s domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_000501 PE=3 SV=1)

HSP 1 Score: 323.9 bits (829), Expect = 6.8e-85
Identity = 181/305 (59.34%), Postives = 207/305 (67.87%), Query Frame = 0


Query: 38  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDIL--------------SGRTCQ 97
           MI + + +    + TI+F TC+WIPL QLK ++  +   +                   Q
Sbjct: 1   MICLVVSQSRFCVVTIIFYTCIWIPLLQLKKSLIGLLKNIIFFNFDQNDYEINNHANAVQ 60

Query: 98  MLTTASLPCEVKLLV--CRFEELQRAVGSEEEICSVCLTEFTREHL-------------- 157
                S   ++KL     + EE +     EE +CS+CL +F +E +              
Sbjct: 61  PWLPISRYVDLKLKSQNKKVEEEEEEEEEEEALCSICLVDFEKEDVLVCGVELWWDDVYD 120

Query: 158 ------------------LKGYDFKIHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELS 217
                             L+  +  IHFVLLISRQGKVRLTKWYSPY+QKER+KV+RELS
Sbjct: 121 KNNVVQFEKGKPSSSSRSLQNLEEMIHFVLLISRQGKVRLTKWYSPYSQKERTKVLRELS 180

Query: 218 GMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFG 277
           G+IL RGPKLCNFVEWRG K VYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFG
Sbjct: 181 GVILTRGPKLCNFVEWRGYKVVYKRYASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFG 240

Query: 278 SVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEQASSISNII 295
           SVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKE+ASSISNII
Sbjct: 241 SVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVETAKEEASSISNII 300

[Close]

BLAST of CsaV3_7G002260 vs. ExPASy TrEMBL
Match: A0A5E4FLS0 (PREDICTED: AP-1 complex subunit OS=Prunus dulcis OX=3755 GN=ALMOND_2B004141 PE=3 SV=1)

HSP 1 Score: 323.2 bits (827), Expect = 1.2e-84
Identity = 191/338 (56.51%), Postives = 217/338 (64.20%), Query Frame = 0


Query: 38  MIGMALCRGSMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQM-LTTASLPC-EVK 97
           MI + + +  +SMATI F TC WIPL Q+K A++ +   +   TCQ+      + C ++ 
Sbjct: 1   MICLMVSQSHLSMATIFFYTCFWIPLLQMKRALARLVGFVFFFTCQVEQEEDQMGCNQMC 60

Query: 98  LLVCRFEELQ----RAVGSE--EEICSVCLTEFTREHL---------------------- 157
           L V RF++LQ       G E  EE CS+CL EF +E +                      
Sbjct: 61  LPVARFQDLQDHGSLRCGQEALEETCSICLVEFEKEDVVSQLSKCGHVFHMDCIERWIER 120

Query: 158 --------------------------------LKGYDF-------------------KIH 217
                                           L G+ +                   KI 
Sbjct: 121 SHFTCPICRSLFFSLKTSHAKWDEDVNSSSSYLNGFSWGGSSPFSARRRLGREFLEKKIQ 180

Query: 218 FVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKRYA 277
           FVLLISRQGKVRLTKWYSPYTQKER+KV+RELSG+IL RGPKLCNFV+WRG K VYKRYA
Sbjct: 181 FVLLISRQGKVRLTKWYSPYTQKERTKVLRELSGVILARGPKLCNFVDWRGYKVVYKRYA 240

Query: 278 SLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGEL 295
           SLYFCMCIDQEDNELEVLE+IHHYVEILDRYFGSVCELDLIFNFHKAYYILDE+LIAGEL
Sbjct: 241 SLYFCMCIDQEDNELEVLEMIHHYVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGEL 300

[Close]

BLAST of CsaV3_7G002260 vs. ExPASy TrEMBL
Match: A0A498IXA0 (RING-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_034730 PE=3 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 3.7e-83
Identity = 186/317 (58.68%), Postives = 205/317 (64.67%), Query Frame = 0


Query: 47  SMSMATIVFLTCVWIPLSQLKAAISSMFDILSGRTCQMLTTASLPCEVKLLVCRFEELQ- 106
           SM MATI F TC WIP  Q+K  ++ +F  +   T          C + L V RF++LQ 
Sbjct: 9   SMGMATIFFYTCFWIPFHQMKKFLARLFSGVIFFT-NFQQQEEEDC-MSLSVARFQDLQA 68

Query: 107 ----RAVGSEEEICSVCLTEFTREHLLKG------------------------------- 166
               R     EE CSVCL +F  E L+                                 
Sbjct: 69  HGTKRCAQVLEETCSVCLVDFEEEDLVSQLGKCGHVFHVDCIERWIESSHFSCPICRSLF 128

Query: 167 YDFK---------------------------------IHFVLLISRQGKVRLTKWYSPYT 226
           ++FK                                 IHFVLLISRQGKVRLTKWYSPYT
Sbjct: 129 FNFKTCHAKLDEDDVSISSSYINGGFSWHYRFLMYLVIHFVLLISRQGKVRLTKWYSPYT 188

Query: 227 QKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKRYASLYFCMCIDQEDNELEVLEII 286
           QKER+KV+RELSG+IL RGPKLCNFV+WRG K VYKRYASLYFCMCIDQEDNELEVLE+I
Sbjct: 189 QKERNKVLRELSGVILARGPKLCNFVDWRGYKVVYKRYASLYFCMCIDQEDNELEVLEMI 248

Query: 287 HHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAGELQESSKKTVARLIAAQDSLVET 295
           HH+VEILDRYFGSVCELDLIFNFHKAYYILDE+LIAGELQESSKKTVARLIAAQDSLVET
Sbjct: 249 HHFVEILDRYFGSVCELDLIFNFHKAYYILDEILIAGELQESSKKTVARLIAAQDSLVET 308

[Close]

BLAST of CsaV3_7G002260 vs. ExPASy TrEMBL
Match: A0A0A0K1P7 (AP complex subunit sigma OS=Cucumis sativus OX=3659 GN=Csa_7G029970 PE=3 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 1.1e-82
Identity = 160/160 (100.00%), Postives = 160/160 (100.00%), Query Frame = 0


Query: 135 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 194
           IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR
Sbjct: 2   IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 61

Query: 195 YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 254
           YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG
Sbjct: 62  YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 121

Query: 255 ELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 295
           ELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK
Sbjct: 122 ELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 161

[Close]

BLAST of CsaV3_7G002260 vs. TAIR 10
Match: AT2G17380.1 (associated protein 19 )

HSP 1 Score: 300.8 bits (769), Expect = 1.2e-81
Identity = 148/160 (92.50%), Postives = 155/160 (96.88%), Query Frame = 0


Query: 135 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 194
           IHFVLL+SRQGKVRLTKWYSPYTQKERSKVIRELSG+ILNRGPKLCNF+EWRG K VYKR
Sbjct: 2   IHFVLLVSRQGKVRLTKWYSPYTQKERSKVIRELSGVILNRGPKLCNFIEWRGYKVVYKR 61

Query: 195 YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 254
           YASLYFCMCID+ DNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG
Sbjct: 62  YASLYFCMCIDEADNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 121

Query: 255 ELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQATK 295
           ELQESSKKTVAR+I+AQD LVE AKE+ASSISNIIAQATK
Sbjct: 122 ELQESSKKTVARIISAQDQLVEVAKEEASSISNIIAQATK 161

[Close]

BLAST of CsaV3_7G002260 vs. TAIR 10
Match: AT4G35410.2 (Clathrin adaptor complex small chain family protein )

HSP 1 Score: 300.8 bits (769), Expect = 1.2e-81
Identity = 149/159 (93.71%), Postives = 154/159 (96.86%), Query Frame = 0


Query: 135 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 194
           IHFVLL+SRQGKVRLTKWYSPY QKERSKVIRELSG+ILNRGPKLCNFVEWRG K VYKR
Sbjct: 2   IHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYKR 61

Query: 195 YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 254
           YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG
Sbjct: 62  YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 121

Query: 255 ELQESSKKTVARLIAAQDSLVETAKEQASSISNIIAQAT 294
           ELQESSKKTVAR+I+AQD LVE AKE+ASSISNIIAQAT
Sbjct: 122 ELQESSKKTVARIISAQDQLVEVAKEEASSISNIIAQAT 160

[Close]

BLAST of CsaV3_7G002260 vs. TAIR 10
Match: AT4G35410.1 (Clathrin adaptor complex small chain family protein )

HSP 1 Score: 220.3 bits (560), Expect = 2.0e-57
Identity = 103/108 (95.37%), Postives = 105/108 (97.22%), Query Frame = 0


Query: 135 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 194
           IHFVLL+SRQGKVRLTKWYSPY QKERSKVIRELSG+ILNRGPKLCNFVEWRG K VYKR
Sbjct: 2   IHFVLLVSRQGKVRLTKWYSPYAQKERSKVIRELSGVILNRGPKLCNFVEWRGYKVVYKR 61

Query: 195 YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHK 243
           YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHK
Sbjct: 62  YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHK 109

[Close]

BLAST of CsaV3_7G002260 vs. TAIR 10
Match: AT1G47830.1 (SNARE-like superfamily protein )

HSP 1 Score: 154.8 bits (390), Expect = 1.0e-37
Identity = 73/140 (52.14%), Postives = 100/140 (71.43%), Query Frame = 0


Query: 135 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 194
           I F+LL +RQGK RL K+Y P  + E+ KV  E+  +++NR  K  NFVE+R  K +Y+R
Sbjct: 2   IRFILLQNRQGKTRLAKYYVPLEESEKHKVEYEVHRLVVNRDAKFTNFVEFRTHKVIYRR 61

Query: 195 YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 254
           YA L+F +C+D  DNEL  LE IH +VEILD +F +VCELDL+FNFHK Y ILDE ++AG
Sbjct: 62  YAGLFFSVCVDITDNELAYLESIHLFVEILDHFFSNVCELDLVFNFHKVYLILDEFILAG 121

Query: 255 ELQESSKKTVARLIAAQDSL 275
           ELQE+SK+ +   ++  + L
Sbjct: 122 ELQETSKRAIIERMSELEKL 141

[Close]

BLAST of CsaV3_7G002260 vs. TAIR 10
Match: AT2G19790.1 (SNARE-like superfamily protein )

HSP 1 Score: 121.7 bits (304), Expect = 9.8e-28
Identity = 57/138 (41.30%), Postives = 94/138 (68.12%), Query Frame = 0


Query: 135 IHFVLLISRQGKVRLTKWYSPYTQKERSKVIRELSGMILNRGPKLCNFVEWRGLKAVYKR 194
           I F+L++++QG+ RL ++Y   T +ER  +  E+    L R  + C+FVE R  K VY+R
Sbjct: 3   IRFILMVNKQGQTRLAQYYEWLTLEERRALEGEIVRKCLARNDQQCSFVEHRNYKIVYRR 62

Query: 195 YASLYFCMCIDQEDNELEVLEIIHHYVEILDRYFGSVCELDLIFNFHKAYYILDELLIAG 254
           YASL+F + +D ++NEL +LE IH  VE +D++FG+VCELD++F+  KA+++L+E+++ G
Sbjct: 63  YASLFFMVGVDDDENELAILEFIHLLVETMDKHFGNVCELDIMFHLEKAHFMLEEMVMNG 122

Query: 255 ELQESSKKTVARLIAAQD 273
            + E+SK  +   I   D
Sbjct: 123 CIVETSKANILSPIQLMD 140

The following BLAST results are available for this feature:

BLAST of CsaV3_7G002260 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645705.1	8.3e-162	100.00	hypothetical protein Csa_020389 [Cucumis sativus]	[more]
KAA0050549.1	2.4e-121	93.12	AP-1 complex subunit sigma-2 [Cucumis melo var. makuwa] >TYK18789.1 AP-1 complex...	[more]
KAG6589096.1	1.1e-110	83.66	AP-1 complex subunit sigma-2, partial [Cucurbita argyrosperma subsp. sororia]	[more]
KAG7022803.1	4.3e-110	83.27	AP-1 complex subunit sigma-2, partial [Cucurbita argyrosperma subsp. argyrosperm...	[more]
KAF3434927.1	5.5e-89	69.43	hypothetical protein FNV43_RR22014 [Rhamnella rubrinervis]	[more]

BLAST of CsaV3_7G002260 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEZ8	1.7e-80	92.50	AP-1 complex subunit sigma-1 OS=Arabidopsis thaliana OX=3702 GN=AAP19-1 PE=1 SV=...	[more]
O23685	1.7e-80	93.71	AP-1 complex subunit sigma-2 OS=Arabidopsis thaliana OX=3702 GN=AAP19-2 PE=2 SV=...	[more]
B0G185	1.4e-58	74.47	AP-1 complex subunit sigma-2 OS=Dictyostelium discoideum OX=44689 GN=ap1s2 PE=3 ...	[more]
Q3ZBS3	9.8e-49	63.70	AP-1 complex subunit sigma-2 OS=Bos taurus OX=9913 GN=AP1S2 PE=2 SV=1	[more]
Q9DB50	9.8e-49	63.70	AP-1 complex subunit sigma-2 OS=Mus musculus OX=10090 GN=Ap1s2 PE=1 SV=1	[more]

BLAST of CsaV3_7G002260 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3D5G1	1.2e-121	93.12	AP-1 complex subunit sigma-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sca...	[more]
A0A7J6EPV4	6.8e-85	59.34	Clat_adaptor_s domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_000...	[more]
A0A5E4FLS0	1.2e-84	56.51	PREDICTED: AP-1 complex subunit OS=Prunus dulcis OX=3755 GN=ALMOND_2B004141 PE=3...	[more]
A0A498IXA0	3.7e-83	58.68	RING-type domain-containing protein OS=Malus domestica OX=3750 GN=DVH24_034730 P...	[more]
A0A0A0K1P7	1.1e-82	100.00	AP complex subunit sigma OS=Cucumis sativus OX=3659 GN=Csa_7G029970 PE=3 SV=1	[more]

BLAST of CsaV3_7G002260 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G17380.1	1.2e-81	92.50	associated protein 19	[more]
AT4G35410.2	1.2e-81	93.71	Clathrin adaptor complex small chain family protein	[more]
AT4G35410.1	2.0e-57	95.37	Clathrin adaptor complex small chain family protein	[more]
AT1G47830.1	1.0e-37	52.14	SNARE-like superfamily protein	[more]
AT2G19790.1	9.8e-28	41.30	SNARE-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR022775	AP complex, mu/sigma subunit	PFAM	PF01217	Clat_adaptor_s	coord: 135..273 e-value: 1.1E-52 score: 177.7
None	No IPR available	GENE3D	3.30.450.60		coord: 134..290 e-value: 4.1E-64 score: 217.1
None	No IPR available	PANTHER	PTHR11753:SF49	AP-1 COMPLEX SUBUNIT SIGMA-2	coord: 135..284
IPR016635	Adaptor protein complex, sigma subunit	PANTHER	PTHR11753	ADAPTOR COMPLEXES SMALL SUBUNIT FAMILY	coord: 135..284
IPR044733	AP-1 complex subunit sigma	CDD	cd14831	AP1_sigma	coord: 136..276 e-value: 4.13012E-102 score: 292.925
IPR011012	Longin-like domain superfamily	SUPERFAMILY	64356	SNARE-like	coord: 135..272

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G002260.1	CsaV3_7G002260.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
biological_process	GO:0016192	vesicle-mediated transport
cellular_component	GO:0030121	AP-1 adaptor complex
molecular_function	GO:0035615	clathrin adaptor activity