CsaV3_6G049040 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CCCATTTCAAAAGTAAGCATTCTTTGGAGTGTTGATCAATTGGATTACAAAACGATACCCAATAAAATGAATTAAAGACAACTAAAAAAAATTGTTTGATTGTTTGCCTAAAACCAAGGTGGTTTCATTTCTTTTTCCTTCTTCTGTCTGAAAGTTTTTTGAAGTTATTCTAAGAGTTTATATGAATGAGATGAAATCAGAGATTTTCAAATAGAAAAAGAGCAGAAAATGGATCATTTTTTTTTCTCTTTTTTGTTCTCTGCATGAAGCGAACATGGAGGGTTGACCCACACTCGCTCTCGTGTCATTTTCAAACAGACATTATGATTTGAGCTTTGAGAAGACACCTCACCATCTCTTCTCTCTCCCCATAAATCCCAAGGCACTTTGAAAGCATTGGAGAATGAAGTAAGTAATTGTATTGTAATATAGATGGAAATTTTGAAGTGCTTAAAATCCATGGTGGCCAAAACTTGTCTCACATATCTCAATGCAGCAAGACAGAAGCAAATTAAGTGCTTTTACTACACTGGCTCCTCCTTCAAGGCTAGCTTCAGAGATTGAAAAAAGCAATGGAAAAAAATAGATTACTGAGGTTTTTTCTGATTGTAAACTAGGAATGAGATGGGCTGTGCTGCGACTTAAGAGGATAAGGTTACGGAAATCAGTGAGGTTTTGGTCAGACTTTTACTCATCGTTCCCCATCATCTTTCCCAATCAAAACCCACCCTTTTTTATTCTAAACATACAGCAACAACTTCCCTTCATCTTATTTTTCTTGTTTGAGTTTCTTTTCAAATCAACCCCATCTTACAATTCATGAGGGAAAAAAATCATGCTTCAAACCTTTAACTCAGATTCTGTTCAAATCCCATCGTTTTCTCTTTTAATTATTTCTGCTTTTTGATAGGCCATGAAAGTACAATTCATCTGTTTTTTTGTTATCTTTTTTGCCATTTATGAACCTGAACTGAGTCCCTTGAAATTTGTGATTTTGGGATTTCTTTTTTCTTTTTCTCTTTTTTCTTTTTTCCATTTCTTCTCTAATTTGTCACGGTTACTCTTGGGATTCTGCACCTCTTTCTGGATCTAACTCATTTTCAGAAAAACAATTCTGATAAAAAAAAAAAAAACAGTGAGAAAGCTTAGTTTCTTTTGAAGAGTGCTCTAACAGGAAGGTAGGTTCATTTCATATTGCTTCTCTCTCTCTTTCTTTTACTGTTTCTTTTTGTTCCCGAGAAGATAACCCAGTTCAGTTCCATCTCATTCTCACTTTCTTAACTCCAAAAAAAGAAACAAAATATGTTCTTTTCCCCATATATTATTTATATTGGAACTAGTGACTCTGTTTTACTCGTTGTTAACAAGTGATTATTTTTCTCTTTTTGTTTTCTGTTTTACTCATTGTTCTCTCCATTGGCTGCTCATGTTAACAAGTGGTCGTGTTCTGTTTTAGATCAACCAGAATGGCAGGTTCCAACACCAGTTGGAGTAATGGGTTTCATGGAAAATCAATCAAAGATGAAGACTTCGATGAAGAAGACACCTGGGGTGAATTTTTCAGTGAAAGAAAAGAAAAAGAAGCTTTGATTCCAATGTCAACAAAATTAAACCACTTCAAATCATCAAGCTCTTCTTCTTCTTCGTCTTCTTCTTCTTCTTCTGCTTCTGCTTGGCGCATGCAGATCAACTCTGTTCCTAAAATGATACCAAAAGCCAAAACTTCAGCAAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCATTGGATATACCAGATTGGTCAAAGATATATGGAAGAAATGGGAATATGGGTTCGTGGATAAATGATGAATATGGCTTGGTTAGTGATGCTGCAGCACGTAATGGTTTTGTCAATGATGATGATGAAGAAGAGGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGACTCAAATTTCATCTTTTTCAGTGTGTGAAGGGATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGTGAGAAATGCCATTTTGACTAAAACTGGTTTTTTGGAGTGATTCAAGGAAAATCACGATGATAACAAAAAATGAAAAATTAAAACCCTCTTTCTTTATTTTTAGTCTTTTTTGTTGAAGTAAGATGTGTGAGTTAAGATTATGGATGAAAAAAGTAGAGGCGAAATATCAAGAGGGATTTGAGAACTGTTTGTTTGAGAGTGTGTGTGTGTTTTTGTTTTATGCTTTTTGGGTCAGCATGTTCTGACATTTTGGTTGTTGCATTTGAGTTTTGGGTAATTGAATTCCAGTTTGGTAATAAAAACAAAATGGTATAAGATAATATATTTCCAAGTTTGCAGTGATTTAGAATTTCAGTGATGAACAAATGAATTATATTGCACTGTTGATGAAAGGACGTGGGATTGGATAATCTCGTTGTCTTGTCTATTTCCGGGGCAGGTGT ATGGCAGGTTCCAACACCAGTTGGAGTAATGGGTTTCATGGAAAATCAATCAAAGATGAAGACTTCGATGAAGAAGACACCTGGGGTGAATTTTTCAGTGAAAGAAAAGAAAAAGAAGCTTTGATTCCAATGTCAACAAAATTAAACCACTTCAAATCATCAAGCTCTTCTTCTTCTTCGTCTTCTTCTTCTTCTTCTGCTTCTGCTTGGCGCATGCAGATCAACTCTGTTCCTAAAATGATACCAAAAGCCAAAACTTCAGCAAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCATTGGATATACCAGATTGGTCAAAGATATATGGAAGAAATGGGAATATGGGTTCGTGGATAAATGATGAATATGGCTTGGTTAGTGATGCTGCAGCACGTAATGGTTTTGTCAATGATGATGATGAAGAAGAGGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGACTCAAATTTCATCTTTTTCAGTGTGTGAAGGGATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGTGAGAAATGCCATTTTGACTAAAACTGGTTTTTTGGAGTGA ATGGCAGGTTCCAACACCAGTTGGAGTAATGGGTTTCATGGAAAATCAATCAAAGATGAAGACTTCGATGAAGAAGACACCTGGGGTGAATTTTTCAGTGAAAGAAAAGAAAAAGAAGCTTTGATTCCAATGTCAACAAAATTAAACCACTTCAAATCATCAAGCTCTTCTTCTTCTTCGTCTTCTTCTTCTTCTTCTGCTTCTGCTTGGCGCATGCAGATCAACTCTGTTCCTAAAATGATACCAAAAGCCAAAACTTCAGCAAATCAAGAACCCAAAACTGTGAAGAGATCCTCAGCTCCATTGGATATACCAGATTGGTCAAAGATATATGGAAGAAATGGGAATATGGGTTCGTGGATAAATGATGAATATGGCTTGGTTAGTGATGCTGCAGCACGTAATGGTTTTGTCAATGATGATGATGAAGAAGAGGATGTTATGGTTCCTCCACATGAATGGATTGCTAGGAAGCTTGCAAGGACTCAAATTTCATCTTTTTCAGTGTGTGAAGGGATTGGAAGAACATTGAAAGGAAGAGATCTAAGTAAAGTGAGAAATGCCATTTTGACTAAAACTGGTTTTTTGGAGTGA MAGSNTSWSNGFHGKSIKDEDFDEEDTWGEFFSERKEKEALIPMSTKLNHFKSSSSSSSSSSSSSSASAWRMQINSVPKMIPKAKTSANQEPKTVKRSSAPLDIPDWSKIYGRNGNMGSWINDEYGLVSDAAARNGFVNDDDEEEDVMVPPHEWIARKLARTQISSFSVCEGIGRTLKGRDLSKVRNAILTKTGFLE* Homology
BLAST of CsaV3_6G049040 vs. NCBI nr
Match: XP_011658149.1 (uncharacterized protein LOC101209587 isoform X1 [Cucumis sativus]) HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. NCBI nr
Match: XP_011658151.1 (uncharacterized protein LOC101209587 isoform X2 [Cucumis sativus] >KGN49111.1 hypothetical protein Csa_004432 [Cucumis sativus]) HSP 1 Score: 385.6 bits (989), Expect = 2.6e-103 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. NCBI nr
Match: TYK13046.1 (zinc-regulated protein 8 [Cucumis melo var. makuwa]) HSP 1 Score: 370.9 bits (951), Expect = 6.7e-99 Identity = 191/198 (96.46%), Postives = 195/198 (98.48%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. NCBI nr
Match: XP_008439987.1 (PREDICTED: uncharacterized protein LOC103484610 isoform X2 [Cucumis melo]) HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98 Identity = 190/197 (96.45%), Postives = 194/197 (98.48%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. NCBI nr
Match: XP_016899153.1 (PREDICTED: uncharacterized protein LOC103484610 isoform X1 [Cucumis melo]) HSP 1 Score: 370.2 bits (949), Expect = 1.1e-98 Identity = 190/197 (96.45%), Postives = 194/197 (98.48%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. ExPASy TrEMBL
Match: A0A0A0KN13 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G513750 PE=4 SV=1) HSP 1 Score: 385.6 bits (989), Expect = 1.3e-103 Identity = 197/197 (100.00%), Postives = 197/197 (100.00%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. ExPASy TrEMBL
Match: A0A5D3CRL7 (Zinc-regulated protein 8 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G006480 PE=4 SV=1) HSP 1 Score: 370.9 bits (951), Expect = 3.2e-99 Identity = 191/198 (96.46%), Postives = 195/198 (98.48%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. ExPASy TrEMBL
Match: A0A1S3B0T6 (uncharacterized protein LOC103484610 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484610 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 5.5e-99 Identity = 190/197 (96.45%), Postives = 194/197 (98.48%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. ExPASy TrEMBL
Match: A0A1S4DT69 (uncharacterized protein LOC103484610 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103484610 PE=4 SV=1) HSP 1 Score: 370.2 bits (949), Expect = 5.5e-99 Identity = 190/197 (96.45%), Postives = 194/197 (98.48%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. ExPASy TrEMBL
Match: A0A6J1IRG2 (uncharacterized protein LOC111478694 OS=Cucurbita maxima OX=3661 GN=LOC111478694 PE=4 SV=1) HSP 1 Score: 279.6 bits (714), Expect = 9.8e-72 Identity = 153/202 (75.74%), Postives = 168/202 (83.17%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. TAIR 10
Match: AT4G04630.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 141.7 bits (356), Expect = 6.2e-34 Identity = 88/181 (48.62%), Postives = 111/181 (61.33%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. TAIR 10
Match: AT4G21970.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 120.6 bits (301), Expect = 1.5e-27 Identity = 81/178 (45.51%), Postives = 107/178 (60.11%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. TAIR 10
Match: AT3G45210.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 81.6 bits (200), Expect = 7.6e-16 Identity = 58/137 (42.34%), Postives = 74/137 (54.01%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. TAIR 10
Match: AT3G15040.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 72.0 bits (175), Expect = 6.0e-13 Identity = 60/156 (38.46%), Postives = 87/156 (55.77%), Query Frame = 0
BLAST of CsaV3_6G049040 vs. TAIR 10
Match: AT5G60680.1 (Protein of unknown function, DUF584 ) HSP 1 Score: 71.6 bits (174), Expect = 7.8e-13 Identity = 61/175 (34.86%), Postives = 88/175 (50.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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