CsaV3_6G036260 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G036260
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 20157060 .. 20157497 (-)
RNA-Seq ExpressionCsaV3_6G036260
SyntenyCsaV3_6G036260
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCCACGGCACAAGTGAATGGAAGTGGTGTCTTAGTGGAAAAATAGGAAAAATAGGAAAATATATGATCTGAGGGAGAGTTTGAAGATGAAGAAACATGGAATTATACAAAGGAGGAAAAAAAAAATCATAGGTTTATCTGGTGTTGGCAGCCTTTCTGTCATACTTTATGGCCATTTCGTCTTTTGCCTTCGAGCAAGGGAGCTTGGAGGATTGCGATATACATTAGTGAGACTGAATATTTCAGCGTGTGTGGTAGTGGCAATGTGGCTCTCCAGGTTAAACGGATTTGGAGGCTTTGCAAGGGCAGATTGAGCTTTACTGTTAATTGGTGGGAGGCAGATATGAAAGTGGCCTCTCCAGAAAGGAGGGAAAATGTGATGAGGAATGAAGTTTTCCCAGTTTATGGTGGTCAATTTCCAATGTCAGACAATTAG

mRNA sequence

ATGGCCACGGCACAAGTGAATGGAAGTGGTGTCTTACCTTTCTGTCATACTTTATGGCCATTTCGTCTTTTGCCTTCGAGCAAGGGAGCTTGGAGGATTGCGATATACATTAGTGAGACTGAATATTTCAGCGTGTGTGGTAGTGGCAATGTGGCTCTCCAGGTTAAACGGATTTGGAGGCTTTGCAAGGGCAGATTGAGCTTTACTGTTAATTGGTGGGAGGCAGATATGAAAGTGGCCTCTCCAGAAAGGAGGGAAAATGTGATGAGGAATGAAGTTTTCCCAGTTTATGGTGGTCAATTTCCAATGTCAGACAATTAG

Coding sequence (CDS)

ATGGCCACGGCACAAGTGAATGGAAGTGGTGTCTTACCTTTCTGTCATACTTTATGGCCATTTCGTCTTTTGCCTTCGAGCAAGGGAGCTTGGAGGATTGCGATATACATTAGTGAGACTGAATATTTCAGCGTGTGTGGTAGTGGCAATGTGGCTCTCCAGGTTAAACGGATTTGGAGGCTTTGCAAGGGCAGATTGAGCTTTACTGTTAATTGGTGGGAGGCAGATATGAAAGTGGCCTCTCCAGAAAGGAGGGAAAATGTGATGAGGAATGAAGTTTTCCCAGTTTATGGTGGTCAATTTCCAATGTCAGACAATTAG

Protein sequence

MATAQVNGSGVLPFCHTLWPFRLLPSSKGAWRIAIYISETEYFSVCGSGNVALQVKRIWRLCKGRLSFTVNWWEADMKVASPERRENVMRNEVFPVYGGQFPMSDN*
Homology
[Close]
BLAST of CsaV3_6G036260 vs. NCBI nr
Match: KGN47807.1 (hypothetical protein Csa_003156 [Cucumis sativus])

HSP 1 Score: 233.4 bits (594), Expect = 9.0e-58
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MATAQVNGSGVLPFCHTLWPFRLLPSSKGAWRIAIYISETEYFSVCGSGNVALQVKRIWR 60
           MATAQVNGSGVLPFCHTLWPFRLLPSSKGAWRIAIYISETEYFSVCGSGNVALQVKRIWR
Sbjct: 1   MATAQVNGSGVLPFCHTLWPFRLLPSSKGAWRIAIYISETEYFSVCGSGNVALQVKRIWR 60

Query: 61  LCKGRLSFTVNWWEADMKVASPERRENVMRNEVFPVYGGQFPMSDN 107
           LCKGRLSFTVNWWEADMKVASPERRENVMRNEVFPVYGGQFPMSDN
Sbjct: 61  LCKGRLSFTVNWWEADMKVASPERRENVMRNEVFPVYGGQFPMSDN 106

[Close]
BLAST of CsaV3_6G036260 vs. ExPASy TrEMBL
Match: A0A0A0KHE5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404220 PE=4 SV=1)

HSP 1 Score: 233.4 bits (594), Expect = 4.4e-58
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 

Query: 1   MATAQVNGSGVLPFCHTLWPFRLLPSSKGAWRIAIYISETEYFSVCGSGNVALQVKRIWR 60
           MATAQVNGSGVLPFCHTLWPFRLLPSSKGAWRIAIYISETEYFSVCGSGNVALQVKRIWR
Sbjct: 1   MATAQVNGSGVLPFCHTLWPFRLLPSSKGAWRIAIYISETEYFSVCGSGNVALQVKRIWR 60

Query: 61  LCKGRLSFTVNWWEADMKVASPERRENVMRNEVFPVYGGQFPMSDN 107
           LCKGRLSFTVNWWEADMKVASPERRENVMRNEVFPVYGGQFPMSDN
Sbjct: 61  LCKGRLSFTVNWWEADMKVASPERRENVMRNEVFPVYGGQFPMSDN 106

The following BLAST results are available for this feature:
BLAST of CsaV3_6G036260 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN47807.19.0e-58100.00hypothetical protein Csa_003156 [Cucumis sativus][more]
BLAST of CsaV3_6G036260 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G036260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KHE54.4e-58100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G404220 PE=4 SV=1[more]
BLAST of CsaV3_6G036260 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G036260.1CsaV3_6G036260.1mRNA