CsaV3_6G013070 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AATTTCCTTTTCAAATGCCTCACTCTTCTAAGCTTCCCCATTCCTGTTTTGCTTCCATCTCTGTTCTATGCGTGCGTCTGTTGCACCTCTTTTGTGGTTAAACGGAAACAGGAATTATTTCTGCTTGAATTCTTCGATGAGAGCACGAGCTTGATGCAATTATTTGTTTTTCTGTTCGCGTGATGCTTAGAGTTAAAGAAACCATCTAGTTCATTGATTTTGGTCCCTTAATGAGATTCAGGAGGAGAAGACAATGCTTTCCATCTTGCGCTTCCCTCCACAAAGTATCCACCTATTAATCTCTGTTCATCAATTGCCTATACATTGAAACTAAGCTTCATTATCTTGATTGTTTCCGACTTGGTGGGAATCTTCACTCTCTGAAATTCTGATTTTCTGCTGTTGTCATTTTCCTGATGTGAAAGGACTATCACTTTGTGTTCCCTTTATTTGTTGTTTGCCTTCGGTTTTCATTGCTCAAAAGTAGTTGTTAGTTGTTAATTACATTGATGGTTATCGTGAGCCATTGTCCAAAAAGTTGAGTGTTACATAGGGTAACGTGCTTGTCAAATGGTCGTTCTTTCTTCATTTGATTGATGTCTTTTTTTGTTTTCTATTTTTAACTGTGATTGCAGAGAAACTACTATTAGAAGCTCCAACAACCATGTTCTTTCTTTGACAGTCTTAGACAGTATTGAACACTATTATCTTCATTTTAATTAACCAGTGTGTTTGTGGATGTCAAAAGTCTGCTATAAATTGACATTGCATCACTTCTTCTTTATCAAATAATTTTACTGACAGTTAAATCTGTACAATTCTTCTAGGTTGATGAAGATGAAATATATTGGAGACGTAGAAGGGGTGATGAAGAGTTAGAATGGTCACATAGTTCCACCTATGTAATTTTACAGCTAGCTCAATGTTTTAGTGAGTAGAGCTTTGTCTAAACCTCTTTTTATGGTGTTGAAATGAACTTCTAGAATTATGATCTTATGAAATTTACATGTGCTTTTATATTCTCACTATGTCTCAGTGTCACCCACCCTTGTTGCTTACGAATTAGCTTGTGGTAAATGTAGCTAATGCTATGGTTGGACCACGATCATGGATCGTAGGACTCTTCAATCGTTCCGGCAACAGAAGGAATGATAAGTTTCTTCAATACCCTTTGAGTCCTCTTCAGGTAAATAACGATAATAATGTGTTGTAGGTCTATGTGCTGTGTCCCATTCATTTGTCAATATCTGTGTTATGTTATTTCGCAAAAGTGGTAGAATGAGTTAAATGTTAGTTCATAAGTGTGAAGGAAGCTTTACCTCTTGCTCATGAGAAGACACTGATACCAATAAGTGGTTCTAGAGTTGAAGTTATAGCAACCCATCCATCCCTACAGTCCACTGTAGATGAGGTTGATGGTGACAAGGAAATTTTTGGGCTGTGCTTTTAAGTGATGGAAGGGTTTGGATTTTGGTATATAAGTAGAAGGGAAAACCTCATCTATTGAGCCGACTCTTAAAGTACAAAGGCCCATTTTGTATCAAGATTTTAGTCCTTAGCTCCTTAGCTCCTTGCTCCAAAATATACTTTTTGACCTCTGTCAGTCAAGGTAAGATTGATCCATTTTTATTTGTTGTCACCTTCTAATGTTTAAGTCAATATGGCTATATTTAAAACTATTTTTCCAATGGTTTGTTGATAGGGGTGTATGAAGCTTGACCATGTATATTATAACATGGGTTTTTTGCTGTCAGGAAGAAAGGCTTCAGAGGCTACAAGACAGAATGCATATACCTTTTGATGAGACGTGCGTTGATCATCAAGTACTTTTCTTTATTTTCTTTCAACACTTTTCAGGTTTTGACTTGTATGTTCTATGAAGATCATGTGTGAGATGAGTCATTATTCTTTAAAACTCACTAAGTATTTTTCATTGTCAAAACTCTATTTTCGAAAACAAAACTTCTGCCTTGATTTCAGTTTTCATGTATTTGAATTTTGAACGAGGCCATTCATTAATCATTCATGTCTTTCATGTACTTCAATTCTATGACACAAAAGGGAACTTTTTTGTTTCTTTCATTACATCAACTCTAGTTAGTTTGTAGATATGCAAATTTATCGATTTTCATCTCAAACTTTTGTTGTATCCATGCCTTTTCTGCTGCATGCACAGTTAGAAGTTAGCTTTTCTTCTCATCTATGCTTTATTTCCATCAGCTATGAGCACAAGTAACTGTCCTTCGTTAATGATAGGAAGCTCTGAGAGCATTGTGGAATGCTGCTTATCCAAATATTGAGCTTAAAGGGATGATATCCGAGCAATGGAAAGAAATGGGTTGGCAAGGTCCTAATCCATCCACTGACTTTAGGTATAATCCAAGCCAACATTTCATTATACATTCTTTTTATCATACCTCTTATTAATGGTGATACTCAAGTAGATGTTGCAATATAGTAGGAAAGGAAAGAAAGGAATTGCACGTGTCATGGGGAGTGTGAGTGCTAGTAATGGGGACCATAGTTAGTTAGGAGGGAAGAGGGTTTAAATAGCAGAGGAGTTGGGCAGTGAAGGGGGGGATCATTTTGGTTGGGTTTCTGTTTCATCCTTGAGAGAGAGGAGAGGCAGAGAGAGAGAATTTCTGATTTCTTTCTTGTTTTACTGCATTTCTATTTCAGATTGATGATAATTCATCAATTCTCTATTGTACTACTTGAGTTTACCTATTGAATAAGAACAATCCTAGTTGGTGTTTTATCGGATTCATGAAAAAAATATTGCTTACTTGGACTTTAGACTTGAGCAGCCCATCTAAAATATGACTTGAAGACTAGAGCTATCTTAGGAGATGAGAAACACTATGGCCGAGTTGAGATAGTACAGTGCACGTACATGTGTACAACTGGGGGAGATTGAGGGAGGAATTCATTCTATTCTTAATGCAATACACTTACTGGACTTTTCTTACTTTTCGGGGTGGGGAGGAGATGAAAATATGTAGCTGCAATTCCACTTTTAATGGGTTGGTAAAAAGAAAAGGAAAATTTGAACCCATGTCATATTTTTCAGTAAAACATTAAATAGTTTCTTTTATTTTTTGGTTCTACAATTGAAAAAACTGTTCATATGTTAACTGAATACTTTATTTTTGATGTTTGAAATTAATTTTTTTCTCACAGTGGGCTGCTTTCTTAGGGGTTGCGGGTTTATTTCCCTTGAAAATTTGCTGTATTTTTCCAGAATGTTTCCGGTATGTCAAATCCTATTCTATCACTCAAACAGTGAACTATTTCACTTTGTTCATTCTATGTTTCTTGTGTCTCATTTCCCTAATGCCTGAGTGAGTTATCACTAATCTCATACAAATTCAAAATGAAGGCATCTTTTCGTAGGTTATTATTGAAGGAAGATGGTAATCGAGCAACTTGGGAATATCCATTTGCTGTTGCTGGCATAAATGTATCATTTATGTTGATTCAAATGTTGGATTTGAACGCCGGTATGCAACAGCATTTTTCAACTCAATTTTTTTTTTTTTGTTTCTTTGACTCGTATATATTAATGGAAGAACTTTCATATGTGTTTATAAAATTTATTTGTTAAATCAATAGAGTAAATGAGTCAAATCCTACTCCATCAGATGTGAAGTTTATGAAGAATAGACAATCAAAATTGGTTTAATAGGGGATTGGGTTCTACAATTCAATTCCAGGTCATTCAAACATAAACAGCTCGTCTCATTTCCAGCAATCCACCTAGATAATGTTTCACAAATTATGAGCTTTCCTTGAGCTGAGGAAGATTATGCCATGTGCATGCTGTATTTGAGTAGCCAATCCTATATTCGTTTTAAAATTGTCCATAGTTTTGCATTAACGGTGTTTGTATTTGCTGGTCACATATTTTTCCTCAAATCCTCCCTTTGTCCTGCAAATGTGTCACAAAACAAAAAACAAATGAACATGGTTTTAAAACCTTCAACAAAATTTGAATCCCTCGGTTCATAACCGTAACCTGCTGGATATTATTTTGAACTTTGCTTAACAATATTGAGATTCGTTTTGTAACTGAAAAATCCTGTTATCCCATCTATTCCTTACAGAAAAACCAAGGAATCTTCCAGGACTAAATTTTGTGAGACTATTAGGAGGTACTATCTATCATTTTGGTTCTTACTAGAACATATCACACACGTTTCCATTACTAAACTCTTCTCTGACACTTCGCATAATACATCCTCTACACGTGACAGAAAATGAAGAAGCATTTGACGTATTATACTGTGTAGCTTTCGAGATGATGGATGCTCAATGGCTAGCTATGCATGCTTCCTATATGGAGTTCAATGTATACCTTTCTCTCTCTCAATCTCACACACACTAACACTAGCATCATCTTCATCATCATGTACCCAACATTTGCATGCACGATGAATTTGTCAAATCTACAATATAATAAGTGCAACATTTTGTTGAAGTTTATGTTACTTGAAATTATCAGGAGGTTTTGCAAGTAACCAGAACACAGCTAGAAAGGGAGCTATCTTTGGAGGATGTTCATAGAATACAAGACCTACCCGCTTATAATCTGTTGCATCAGTAGTTTTGTTGTCCTGACGGTCAGTCAGTTTCATAGACTGTTTATGAATTTGAACTTGGGAAC ATGAGATTCAGGAGGAGAAGACAATGCTTTCCATCTTGCGCTTCCCTCCACAAAGTTGATGAAGATGAAATATATTGGAGACGTAGAAGGGGTGATGAAGAGTTAGAATGGTCACATAGTTCCACCTATGTAATTTTACAGCTAGCTCAATGTTTTACTAATGCTATGGTTGGACCACGATCATGGATCGTAGGACTCTTCAATCGTTCCGGCAACAGAAGGAATGATAAGTTTCTTCAATACCCTTTGAGTCCTCTTCAGGAAGAAAGGCTTCAGAGGCTACAAGACAGAATGCATATACCTTTTGATGAGACGTGCGTTGATCATCAAGAAGCTCTGAGAGCATTGTGGAATGCTGCTTATCCAAATATTGAGCTTAAAGGGATGATATCCGAGCAATGGAAAGAAATGGGTTGGCAAGGTCCTAATCCATCCACTGACTTTAGGGGTTGCGGGTTTATTTCCCTTGAAAATTTGCTGTATTTTTCCAGAATGTTTCCGGCATCTTTTCGTAGGTTATTATTGAAGGAAGATGGTAATCGAGCAACTTGGGAATATCCATTTGCTGTTGCTGGCATAAATGTATCATTTATGTTGATTCAAATGTTGGATTTGAACGCCGAAAAACCAAGGAATCTTCCAGGACTAAATTTTGTGAGACTATTAGGAGAAAATGAAGAAGCATTTGACGTATTATACTGTGTAGCTTTCGAGATGATGGATGCTCAATGGCTAGCTATGCATGCTTCCTATATGGAGTTCAATGAGGTTTTGCAAGTAACCAGAACACAGCTAGAAAGGGAGCTATCTTTGGAGGATGTTCATAGAATACAAGACCTACCCGCTTATAATCTGTTGCATCAGTAG ATGAGATTCAGGAGGAGAAGACAATGCTTTCCATCTTGCGCTTCCCTCCACAAAGTTGATGAAGATGAAATATATTGGAGACGTAGAAGGGGTGATGAAGAGTTAGAATGGTCACATAGTTCCACCTATGTAATTTTACAGCTAGCTCAATGTTTTACTAATGCTATGGTTGGACCACGATCATGGATCGTAGGACTCTTCAATCGTTCCGGCAACAGAAGGAATGATAAGTTTCTTCAATACCCTTTGAGTCCTCTTCAGGAAGAAAGGCTTCAGAGGCTACAAGACAGAATGCATATACCTTTTGATGAGACGTGCGTTGATCATCAAGAAGCTCTGAGAGCATTGTGGAATGCTGCTTATCCAAATATTGAGCTTAAAGGGATGATATCCGAGCAATGGAAAGAAATGGGTTGGCAAGGTCCTAATCCATCCACTGACTTTAGGGGTTGCGGGTTTATTTCCCTTGAAAATTTGCTGTATTTTTCCAGAATGTTTCCGGCATCTTTTCGTAGGTTATTATTGAAGGAAGATGGTAATCGAGCAACTTGGGAATATCCATTTGCTGTTGCTGGCATAAATGTATCATTTATGTTGATTCAAATGTTGGATTTGAACGCCGAAAAACCAAGGAATCTTCCAGGACTAAATTTTGTGAGACTATTAGGAGAAAATGAAGAAGCATTTGACGTATTATACTGTGTAGCTTTCGAGATGATGGATGCTCAATGGCTAGCTATGCATGCTTCCTATATGGAGTTCAATGAGGTTTTGCAAGTAACCAGAACACAGCTAGAAAGGGAGCTATCTTTGGAGGATGTTCATAGAATACAAGACCTACCCGCTTATAATCTGTTGCATCAGTAG MRFRRRRQCFPSCASLHKVDEDEIYWRRRRGDEELEWSHSSTYVILQLAQCFTNAMVGPRSWIVGLFNRSGNRRNDKFLQYPLSPLQEERLQRLQDRMHIPFDETCVDHQEALRALWNAAYPNIELKGMISEQWKEMGWQGPNPSTDFRGCGFISLENLLYFSRMFPASFRRLLLKEDGNRATWEYPFAVAGINVSFMLIQMLDLNAEKPRNLPGLNFVRLLGENEEAFDVLYCVAFEMMDAQWLAMHASYMEFNEVLQVTRTQLERELSLEDVHRIQDLPAYNLLHQ* Homology
BLAST of CsaV3_6G013070 vs. NCBI nr
Match: XP_011656954.1 (ELMO domain-containing protein A isoform X1 [Cucumis sativus] >KGN46754.1 hypothetical protein Csa_020921 [Cucumis sativus]) HSP 1 Score: 605.5 bits (1560), Expect = 2.4e-169 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. NCBI nr
Match: XP_008448269.1 (PREDICTED: ELMO domain-containing protein A isoform X1 [Cucumis melo]) HSP 1 Score: 584.7 bits (1506), Expect = 4.3e-163 Identity = 279/288 (96.88%), Postives = 283/288 (98.26%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. NCBI nr
Match: XP_038900724.1 (ELMO domain-containing protein A isoform X1 [Benincasa hispida]) HSP 1 Score: 582.4 bits (1500), Expect = 2.1e-162 Identity = 273/288 (94.79%), Postives = 285/288 (98.96%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. NCBI nr
Match: XP_038900725.1 (ELMO domain-containing protein A isoform X2 [Benincasa hispida]) HSP 1 Score: 546.6 bits (1407), Expect = 1.3e-151 Identity = 257/272 (94.49%), Postives = 268/272 (98.53%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. NCBI nr
Match: XP_022140276.1 (ELMO domain-containing protein A isoform X1 [Momordica charantia]) HSP 1 Score: 545.4 bits (1404), Expect = 2.9e-151 Identity = 255/288 (88.54%), Postives = 276/288 (95.83%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. ExPASy Swiss-Prot
Match: Q54YW1 (ELMO domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=elmoA PE=1 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 4.7e-27 Identity = 60/190 (31.58%), Postives = 100/190 (52.63%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. ExPASy Swiss-Prot
Match: Q54VR8 (ELMO domain-containing protein B OS=Dictyostelium discoideum OX=44689 GN=elmoB PE=4 SV=1) HSP 1 Score: 99.4 bits (246), Expect = 7.2e-20 Identity = 55/184 (29.89%), Postives = 98/184 (53.26%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. ExPASy Swiss-Prot
Match: A6QR40 (Engulfment and cell motility protein 3 OS=Bos taurus OX=9913 GN=ELMO3 PE=2 SV=1) HSP 1 Score: 98.6 bits (244), Expect = 1.2e-19 Identity = 59/207 (28.50%), Postives = 110/207 (53.14%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. ExPASy Swiss-Prot
Match: Q499U2 (Engulfment and cell motility protein 3 OS=Rattus norvegicus OX=10116 GN=Elmo3 PE=2 SV=1) HSP 1 Score: 97.1 bits (240), Expect = 3.6e-19 Identity = 59/207 (28.50%), Postives = 110/207 (53.14%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. ExPASy Swiss-Prot
Match: Q8BYZ7 (Engulfment and cell motility protein 3 OS=Mus musculus OX=10090 GN=Elmo3 PE=1 SV=2) HSP 1 Score: 96.7 bits (239), Expect = 4.7e-19 Identity = 59/207 (28.50%), Postives = 109/207 (52.66%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. ExPASy TrEMBL
Match: A0A0A0KD30 (ELMO domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G128640 PE=4 SV=1) HSP 1 Score: 605.5 bits (1560), Expect = 1.1e-169 Identity = 288/288 (100.00%), Postives = 288/288 (100.00%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. ExPASy TrEMBL
Match: A0A1S3BJA2 (ELMO domain-containing protein A isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490510 PE=4 SV=1) HSP 1 Score: 584.7 bits (1506), Expect = 2.1e-163 Identity = 279/288 (96.88%), Postives = 283/288 (98.26%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. ExPASy TrEMBL
Match: A0A6J1CFM1 (ELMO domain-containing protein A isoform X1 OS=Momordica charantia OX=3673 GN=LOC111010989 PE=4 SV=1) HSP 1 Score: 545.4 bits (1404), Expect = 1.4e-151 Identity = 255/288 (88.54%), Postives = 276/288 (95.83%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. ExPASy TrEMBL
Match: A0A1S3BJX0 (ELMO domain-containing protein A isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490510 PE=4 SV=1) HSP 1 Score: 541.2 bits (1393), Expect = 2.6e-150 Identity = 263/288 (91.32%), Postives = 267/288 (92.71%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. ExPASy TrEMBL
Match: A0A6J1G7C3 (ELMO domain-containing protein A isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111451525 PE=4 SV=1) HSP 1 Score: 536.6 bits (1381), Expect = 6.5e-149 Identity = 249/287 (86.76%), Postives = 275/287 (95.82%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. TAIR 10
Match: AT1G03620.1 (ELMO/CED-12 family protein ) HSP 1 Score: 382.9 bits (982), Expect = 2.3e-106 Identity = 185/265 (69.81%), Postives = 218/265 (82.26%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. TAIR 10
Match: AT3G03610.1 (ELMO/CED-12 family protein ) HSP 1 Score: 294.7 bits (753), Expect = 8.3e-80 Identity = 146/271 (53.87%), Postives = 190/271 (70.11%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. TAIR 10
Match: AT2G44770.1 (ELMO/CED-12 family protein ) HSP 1 Score: 286.6 bits (732), Expect = 2.3e-77 Identity = 141/236 (59.75%), Postives = 177/236 (75.00%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. TAIR 10
Match: AT3G60260.1 (ELMO/CED-12 family protein ) HSP 1 Score: 284.3 bits (726), Expect = 1.1e-76 Identity = 132/216 (61.11%), Postives = 167/216 (77.31%), Query Frame = 0
BLAST of CsaV3_6G013070 vs. TAIR 10
Match: AT3G60260.2 (ELMO/CED-12 family protein ) HSP 1 Score: 284.3 bits (726), Expect = 1.1e-76 Identity = 132/216 (61.11%), Postives = 167/216 (77.31%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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