CsaV3_6G009100 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AAAAAATTCAAACTTTAATACAATGAGATTATAAGTTTGTTTGATTAAAATTGGGTTGATATTTAGTTTTGGTATAAAACTAGTTTTTTTCCTCAAAAAAGAGAAAAAGAAAAGGGCTCAAGGGGTCAAGAGCCAGCGGGCGCATCGACCAAAACCCGGGGGCGGGGCTTAGTGAAACCAAGTTTTTGAGAATTTTGCAATGGCGATGGATGCTGGATCATCGTCCTCCCAAGAAAACCAATCATCTCCTTCCTATCACCATCAATCTTCTTCACCAAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCTGAATACGCTGCTCAACAGGCGCTGCTATACCAACGGGCTATCGACCACTCTTTGGAGTCTGCCATTGAAGTCTCCAAATCTCGCCTTTCTCAGATTCGTTCCACCTCTTTTCCTCATTTTCAGAAGGCAGTTGTAATTTCTCCATCTCTTATTATTACTTTTGTTTTTTTTTTCTCTCCCGTTGTTCTTTGTTTAGTTTTCAATTAAGGATGGATGTTAGTTTAGGTCTCCAAGAAAAGGGGTTGAAAGGTTTTGAATCGTTACTCAAGGTATTGGACTGTAGTCTATTCGTAGATGATTTGGTTGACCGATGCTTGTATATCTAATAGTTAAAATAGCTCCAATGGTGGCCGTTGGCAAGGGTTGGAGTCTCTCCTCATACCGATTTTGAGGTTAAAAAATTCGAATCTTTAAGTGAGTTTAATGCCAAAAACTCTGAAATGTCTCCTGGGGACTAGGGGAGTAAAGCTGAATAATCGAACTCGAGACCTAGCCTGTTGAATGAATATTTTATGGCTCTCTTTGAAGTTTTTTTACCACAATTGTTGGCTTTGGACATAAATGAAGATTGCATCTAATGACTAGCTCGGCTGCTTGAGTTATGTTTGAAATGTGCTGGAATTTAGTGAGCCAACGTATGTCCCCATGCATTTCTTAAGTCCAATTGATGTTTTTGGCACATTGAAGAGTTAGTTCATAATTTTTTCTTTCAAGGATTGCATATGAAAATGTTTTTCTTGCCTCTTGAGGGTTGTACATTTTTACACCAAAATAGGGCATTGAAAATGGATGATTCAAGAACATTCCCAGTGGATGTTTCTTTTCCTTTAAAAATTCTAGAATTTCTCTCTTCTCATGTCTTCTAAAGAATGGCTCTGATCGTGCTAGCCCGTAAATGCCCTTTTGATGCCTTAAAAGGGTGATCAGTGAACAACATTATGATTTACGCAATTGTGTCCAATGGACCAGCAATATGCCAACCAACAGTCTAGATTTCAGCTTATCCTTTTTGTAAAGTCAGCATCAGGAAGGAGAAATTTGATGCAAAGGGCATTTTTTTTTTCACAACCTATCCAGCGAATTGAGGCAGGAGTGGACAATTCCCATAGTAGAAACTTGACTCTCTTTGGACTAGGAAACTTTCACAATTGTTTGAAGAGACCAAAGTTATTCCTGGTATGGTGTGATATTAAGGATTTGACAGTAAAAAATCCACTGTTATCCAAATTCCAGATCTAAATGTCCTCCCTCAGTGTGAGGAAGAATGAGAATGGGGATGAGTTGATGGATGGAGACCTTTTCGGAAATTTCATCCTCAAGGTTACTTCTCAAGTTCAGCACCATAGACGAGTCAATCAAATATTTTTGGAATTTCAGATGTCAGTTATATGCTTGTTTTTTCTTGGCTTGATGGCATTTACATGTCCTAATCATTGACATCTCTTGTTTCCCACAATAAATAGTTGTGATTTATATTATTTTATTTTGTTTTCTTGCTAAACTAAATGATTCATACTTTTTATAATGAAAATCTCATTTGATAGCACCTTGTTCATTCTCTGTTTGCCTACTTTTGGCTTCTCTGTTTTTTTTTCTTATTTTATTGAACATTATGCTCTAGACTTATCATTTTATGCATTGAAAACATGCCTCTAGGATTCCTTTTGGGAGGCGAAGTCCGAACTTGCTGCTTATGAGAATTTAGTATTTGGAAAAATTAGAGGTTTGTTCCTCATTTATCATTGTGATGGAAAATTGACTTTACCTTCCTTCGTTTTTTCCTTTTCTTTTTTGTACTCGAATATTTAATAACTGAAAACTGTTTTGAATTTTTTCTGCAGATGGTATTCTTGTTGCTGCATCACATCCACTGATCAGTTGTGGAGTTGCAACTGGCATGGGTTTCTTAGTCTTTAAAAGTATGATATCATTTATTGATGGGTTTTAATTTGATGATAAGATTTTTTAATGCATAGTTATAAATTAATAGATTCGTTTACTTGAAATACACTTATGTCTAATAATTTTTCTATATTTCATATCTTCCAATATTAATTGCTTTCTTATGATACCAAATCATTCAAGTATGTCTGAAATGAGTCTGGATTTTTATGTAATTAAATCTTCGAAAAGCTCTCACATTATTCCACTACAATAAATTCACAGTTCACCTAGATTTTGAGGCTGCTTTTGTAGTGAGTACATGGAAATTGTAACATTCTGAATCTTGAATATTTATTTTTCAACAGTGTTTTAATGTTCTGTGTAATCCTGCAGAGCCCAGAAATTTCTTATACTACAAAACCATTCGACTTTTCGTGAATGAAGAGGTGAGCAAATTTTAATCTATCTGTTATGTGATATTACCTTCTTTCTGTTAGCTTAGACTTTTGGGTTGATTGGTATTTTAAGGGGATGTCCAAGAGCTTCTATGTTCAAACGTCTATAGTGTTATTTCACCTCCAATTATTATTGATTTTTACATGTTGGATCTTCTACATTTTTCAAGCCCACAGGAGGGAGATTGTTCAATGATATAATATTAGATTTACTTTTACCCATAAACTTAGACTTTTGGGTCAGGCGGTGATTTAAGACTTCCATAACTACAAAAGAGAAAAAAGCCAAAAAAGAAAAAAAGTATAAGTGGAACTCCAACTTTGACGAATTAATTAATTAATTTTTTCTGTTATTCCAACTTTTACAAATTTTATCATGGAAAATCATATCTATATATTGGTTTTGCAGTCCTTACTTTCCAAAGCTGATGCTAAAGTAAAAGAGTTGCGGCAGTCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGGTAGGATTATATATTTCTCTTAAATCCTCAATTCATCGCTGATTGAAATATTAGTAAAATTGTCACATGAATACCTTTGATTATATATTTCTCCTTTCTGTATTAGAGATGTTGAGGTTAGGTAAGGGAGAAAGGAAATTTGTTATTGGAATCTTATTCCTTTCAAGGGATTTTCTTCTACATCTCTTTTGCAGTACGTACTAGATCCTTCTTCATTTAGAGAGTTTGTTTTCTCTGTTCTTTGGGAGGTGAACATCCCAACGAAGATGAAGTCTTCTTTGGGATTGTTTGATGTTTGGTCCTTGGAAATATCTTCTTGTTGGGGCAACCATTTGCTCCCTGTTTGCTCTGGCTTTTCACTTTTGATACCTATCTGACAGTAGGGATCTTTAACCGAGGTAAGTTGACTTTGCTCACATGTCAATGACATATACCTAAGCAAGGACGTGGTAACATGATTGGACTAACCGTATAAAAGAAGCTCACAATGGAATGACTATCATTATGGATTGTAGGGTTCAACCAAAAACCATCCAGAAAGGAATTATATTTCTCTTTTGTACTACTTGCAGCTCGAATTCGTCAGTTTTCCATGTTTTGAAACGTTTGTACTCTAAGAATGAAAAATTATTTTCTTTTCTATAATTTTCATTTCAGAAAAGAACACTTCAAGCTGAAGATGAATTGATACGAGGAAGAACAAAACTCAGGTTTGCTCAATATTTGTTGCTAATAGGCTGTTAGATATAATACCCTTATTGGTACCCCTTCTCATTTCTTTTTCTCTTGCAGGCAAGCAGGAAAACAAATTGAAGGTGTGATTCAGTCGGCTCATAAAATTGAAAGAAAGGCAAGAGGTATACAAATGAATTCTCTAGCCATGTTGAAATTGAAGAATGGTTAGAAAAATGCATGAAAATTTTGCTACATCTCAGCCCACGCTATTTTTTGTGTGCCATGACATCAGGTTTAAAAGATATTCTTGCAGATCTTCCCACTAGGGAAGCTTCACGATTTAGGACTCAGGTGAGTGTTCCATTTGACTCTGCACTTTTTTGTTAGTGTTGCATCCTCGTCGAGTGAGCTTTCTGAATTCTCTCTTCCAAAGTATTGATTGAATAGTTTGGTCAGAATTTGGTTAGAAGAAACTTCAAAGTAGCAGCCTACCAACTTTAGTTTTTTCCTCGCAGTTCTATATTTTTTACAGTCATCAATCCCCCATCCTGTTTTGGTAATTCTCATTTGTGATGTATTGAAAACCCAGCGTGTGAGTGTGCACTAGATGAAATAAGCTCAATTTTTACTCCACATGAATCAATTGTAATATAAAACTTTTATTTCATCAATTTTAAACCTTATACTAGGATATGCAACCCTTTCCTCTCTCCTAGTCTCCCTTAAACCCTAAACCTCACTGTTATTCGTTGTCATCGTCCCCCTGCTGTTAGTCGATTTCTTACGCTGCTGTTTGGTGACCAGCATGTTCTCTTTCAATTTTTCTTCTCTCGCCTTGCTTGACAGATCTTGGGCCCCTTCTCCTCCTAATCTTCTCCTCACCCTAAAATGCTAACCCTCCCTGCCCGCCGTCCCTTTCTGCTGACACTGCTAGTTGTTACCCTTTCACTGTTCACTTGTCTTTCATCGATCGTTTCTGTCGCTGTTTGCCGGTCGATTTTCCCCTTCCCCTTTTCTCATCTCCTCACCTTGTGCAACTCTTGTGGAAGTTCTATTCTGTATTTTGTTCTTTTTGGGTTTTCTTGTAGCTGTTTCTTTTTTGTTTTTTAATTTTTACCACCTTGTGGAGTTTGTATCTTTGAGTTCCAATCTCTTTTTCATTTATTCAATGAAAGTTTTGTTTTTTTGTTTTTTTTTTTATTTGTATAAATATTTTTATGTTTATGTTTTTTATTTTTTTAATCTTATCCTCGAGTTTGTAATGCATTTCACATCCTCAGTTCAGTTGGATGTGAATCATGTGACGCACGGACAGCCTCTCTTAATTGTGTTATTCTGTTGCTAGAATTGAGGATTAGGCTCTAAGTATTTTCATGATTGGGGCTGGGCATTTATTTGACATGATTTTGGTTGCTTTGTCAATTAAATTTTCTATGCTTTAGTGCTTGGTTCACGAGTGATATTAATTCAGAGACTTGTTCTAGTTCAAGGTTTAAATCCATGAAATTGAAAGGTTAAAATTGTTAAAAACAATTGGTATAAATCAAACATTTCCCTATATATTTCCATATACACTAATCTTGGAATCTGCATTTGCAGGTATCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGGTTAAGCAAGGAGGTCTCAAAAATAAGCAACTATGGCATCTCTGTCTGATAAATTCAAATCAAACATTTGACTCAGCCTCAACAATATTACTCCACCCCAGAATTCACTTGATATGGTCTGAAACCACTACCTGCATATCCTTTCTCATCAGTTGGTAGAAGGATGAGTTCTTTTTCTTGTTTTTAAAGTGCTCGACCAAAATAAGTTTTTAAGTTTTTCTGTTGAGTTACACCACTGAAAGGTGAATCTGATTGTTCAGTACAATAATTGTAGATGCAATATCAATAGAGTTGGTCCTTTCGATAGAATGGTAATTCCTTCTAACAAAGTGTACTTGTTACAAGAATTGTGAATTCAGCGAGCAGTGCTCATTCTGCATTTACTTAATACTACTTATAGACCAAATGGTAATCGTGTTTGTTGAAAATGTCGTTACTGTGAGATGAGTATCTTGGAATACAAAATGGATACACATTAATATTCAGATTGGCACCAGCTAAAACAACCACTCTTTGCTTTATTTCCTTGGAAATGAGTAATATTATAAATAACAAGAAGTTGACGCAGAAGGATAGTGTGTGTTTCTCATGGACCTACTACGTTGGATCCAAGTTGGAGAGGAAGCAAACTTCATTTAGAAAGTTGAACCCGAGAAGAGCAATTTTATTTTCTAGGAGTTGGTTTCTTCGAGATATTAAGTACTTTACTTGGCCTCCCTATGATAATTTTTGAAGTCGGAG ATGGCGATGGATGCTGGATCATCGTCCTCCCAAGAAAACCAATCATCTCCTTCCTATCACCATCAATCTTCTTCACCAAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCTGAATACGCTGCTCAACAGGCGCTGCTATACCAACGGGCTATCGACCACTCTTTGGAGTCTGCCATTGAAGTCTCCAAATCTCGCCTTTCTCAGATTCGTTCCACCTCTTTTCCTCATTTTCAGAAGGCAGTTGATTCCTTTTGGGAGGCGAAGTCCGAACTTGCTGCTTATGAGAATTTAGTATTTGGAAAAATTAGAGATGGTATTCTTGTTGCTGCATCACATCCACTGATCAGTTGTGGAGTTGCAACTGGCATGGGTTTCTTAGTCTTTAAAAAGCCCAGAAATTTCTTATACTACAAAACCATTCGACTTTTCGTGAATGAAGAGTCCTTACTTTCCAAAGCTGATGCTAAAGTAAAAGAGTTGCGGCAGTCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGAAAAGAACACTTCAAGCTGAAGATGAATTGATACGAGGAAGAACAAAACTCAGGCAAGCAGGAAAACAAATTGAAGGTGTGATTCAGTCGGCTCATAAAATTGAAAGAAAGGCAAGAGGTTTAAAAGATATTCTTGCAGATCTTCCCACTAGGGAAGCTTCACGATTTAGGACTCAGGTATCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGGTTAAGCAAGGAGGTCTCAAAAATAAGCAACTATGGCATCTCTGTCTGA ATGGCGATGGATGCTGGATCATCGTCCTCCCAAGAAAACCAATCATCTCCTTCCTATCACCATCAATCTTCTTCACCAAAACCTCAATCATTGGAAGACTTAGCTAAGCCTTGGGCTGAATACGCTGCTCAACAGGCGCTGCTATACCAACGGGCTATCGACCACTCTTTGGAGTCTGCCATTGAAGTCTCCAAATCTCGCCTTTCTCAGATTCGTTCCACCTCTTTTCCTCATTTTCAGAAGGCAGTTGATTCCTTTTGGGAGGCGAAGTCCGAACTTGCTGCTTATGAGAATTTAGTATTTGGAAAAATTAGAGATGGTATTCTTGTTGCTGCATCACATCCACTGATCAGTTGTGGAGTTGCAACTGGCATGGGTTTCTTAGTCTTTAAAAAGCCCAGAAATTTCTTATACTACAAAACCATTCGACTTTTCGTGAATGAAGAGTCCTTACTTTCCAAAGCTGATGCTAAAGTAAAAGAGTTGCGGCAGTCAATTGATCGGATAAAGGTTGAAAGTGAGAGGCTGGAGAAAAGAACACTTCAAGCTGAAGATGAATTGATACGAGGAAGAACAAAACTCAGGCAAGCAGGAAAACAAATTGAAGGTGTGATTCAGTCGGCTCATAAAATTGAAAGAAAGGCAAGAGGTTTAAAAGATATTCTTGCAGATCTTCCCACTAGGGAAGCTTCACGATTTAGGACTCAGGTATCTAACCTTGCTTCTGAGGCAAAGAAGGAAAGAATTGGGTTAAGCAAGGAGGTCTCAAAAATAAGCAACTATGGCATCTCTGTCTGA MAMDAGSSSSQENQSSPSYHHQSSSPKPQSLEDLAKPWAEYAAQQALLYQRAIDHSLESAIEVSKSRLSQIRSTSFPHFQKAVDSFWEAKSELAAYENLVFGKIRDGILVAASHPLISCGVATGMGFLVFKKPRNFLYYKTIRLFVNEESLLSKADAKVKELRQSIDRIKVESERLEKRTLQAEDELIRGRTKLRQAGKQIEGVIQSAHKIERKARGLKDILADLPTREASRFRTQVSNLASEAKKERIGLSKEVSKISNYGISV* Homology
BLAST of CsaV3_6G009100 vs. NCBI nr
Match: XP_011656867.1 (RGS1-HXK1-interacting protein 1 isoform X1 [Cucumis sativus] >KGN46566.2 hypothetical protein Csa_005221 [Cucumis sativus]) HSP 1 Score: 492.7 bits (1267), Expect = 2.1e-135 Identity = 265/265 (100.00%), Postives = 265/265 (100.00%), Query Frame = 0
BLAST of CsaV3_6G009100 vs. NCBI nr
Match: XP_011656868.1 (RGS1-HXK1-interacting protein 1 isoform X2 [Cucumis sativus]) HSP 1 Score: 484.6 bits (1246), Expect = 5.6e-133 Identity = 263/265 (99.25%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of CsaV3_6G009100 vs. NCBI nr
Match: XP_008459726.1 (PREDICTED: uncharacterized protein LOC103498769 [Cucumis melo]) HSP 1 Score: 480.3 bits (1235), Expect = 1.1e-131 Identity = 256/265 (96.60%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of CsaV3_6G009100 vs. NCBI nr
Match: TYK24760.1 (uncharacterized protein E5676_scaffold266G003230 [Cucumis melo var. makuwa]) HSP 1 Score: 476.9 bits (1226), Expect = 1.2e-130 Identity = 254/263 (96.58%), Postives = 261/263 (99.24%), Query Frame = 0
BLAST of CsaV3_6G009100 vs. NCBI nr
Match: XP_038875078.1 (LOW QUALITY PROTEIN: RGS1-HXK1-interacting protein 1 [Benincasa hispida]) HSP 1 Score: 451.4 bits (1160), Expect = 5.2e-123 Identity = 243/265 (91.70%), Postives = 254/265 (95.85%), Query Frame = 0
BLAST of CsaV3_6G009100 vs. ExPASy Swiss-Prot
Match: Q84K90 (RGS1-HXK1-interacting protein 1 OS=Arabidopsis thaliana OX=3702 GN=RHIP1 PE=1 SV=1) HSP 1 Score: 121.7 bits (304), Expect = 1.2e-26 Identity = 70/216 (32.41%), Postives = 121/216 (56.02%), Query Frame = 0
BLAST of CsaV3_6G009100 vs. ExPASy TrEMBL
Match: A0A1S3CAD0 (uncharacterized protein LOC103498769 OS=Cucumis melo OX=3656 GN=LOC103498769 PE=4 SV=1) HSP 1 Score: 480.3 bits (1235), Expect = 5.1e-132 Identity = 256/265 (96.60%), Postives = 263/265 (99.25%), Query Frame = 0
BLAST of CsaV3_6G009100 vs. ExPASy TrEMBL
Match: A0A5D3DNB0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003230 PE=4 SV=1) HSP 1 Score: 476.9 bits (1226), Expect = 5.6e-131 Identity = 254/263 (96.58%), Postives = 261/263 (99.24%), Query Frame = 0
BLAST of CsaV3_6G009100 vs. ExPASy TrEMBL
Match: A0A6J1H5U3 (uncharacterized protein LOC111460300 OS=Cucurbita moschata OX=3662 GN=LOC111460300 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 5.0e-119 Identity = 235/265 (88.68%), Postives = 251/265 (94.72%), Query Frame = 0
BLAST of CsaV3_6G009100 vs. ExPASy TrEMBL
Match: A0A6J1L5I2 (uncharacterized protein LOC111499304 OS=Cucurbita maxima OX=3661 GN=LOC111499304 PE=4 SV=1) HSP 1 Score: 434.5 bits (1116), Expect = 3.2e-118 Identity = 233/265 (87.92%), Postives = 250/265 (94.34%), Query Frame = 0
BLAST of CsaV3_6G009100 vs. ExPASy TrEMBL
Match: A0A6J1DXH1 (uncharacterized protein LOC111024998 OS=Momordica charantia OX=3673 GN=LOC111024998 PE=4 SV=1) HSP 1 Score: 415.6 bits (1067), Expect = 1.5e-112 Identity = 228/265 (86.04%), Postives = 243/265 (91.70%), Query Frame = 0
BLAST of CsaV3_6G009100 vs. TAIR 10
Match: AT2G45060.1 (Uncharacterised conserved protein UCP022280 ) HSP 1 Score: 267.7 bits (683), Expect = 1.0e-71 Identity = 150/270 (55.56%), Postives = 192/270 (71.11%), Query Frame = 0
BLAST of CsaV3_6G009100 vs. TAIR 10
Match: AT4G26410.1 (Uncharacterised conserved protein UCP022280 ) HSP 1 Score: 121.7 bits (304), Expect = 8.9e-28 Identity = 70/216 (32.41%), Postives = 121/216 (56.02%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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