CsaV3_6G007790 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G007790
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	Coiled-coil domain-containing protein SCD2
Location	chr6: 6244426 .. 6247363 (-)
RNA-Seq Expression	CsaV3_6G007790
Synteny	CsaV3_6G007790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCTTCTCCGGTCTGATTTTCACATTCGCTTCAGCTGTATGCGTTTTGGCTGTTGTTATATATATTCGATCAGCAACAAGATGGAAAAGTTCTTCTCAGTGCAGCAAATCCACACTCACTGCGAATCTTCCCACTCAATCAAGCTTGTTTCAGGGCCTCCTTCCTGGTACTGACCATCCACATCTTCTCTCTCGTTTCTTCTTCATTTCATTGAATTCTTTCTAACTTTCCTCAAAATTTGCAGTGGAAAAACCTCCTTGCTTTTTCAGTTCGCTTTTAATTTGGGTCTGGAGGGCAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAAAACAAACCTCCATATCTTTCTCAGGCATCTCTCACTTTTTCTGCTTCTGTCTCTTTCATTGGCGGTTATATTGAATAGCATAGAATACTGTACATTTTCTGAATCTTGGGGTTCTTTGGGACTAACATTCAGGGAGTTGATCCAACATCCGAGACCTTTCAGCGTATACAAATGAAGTCGGTGATCGTTTTATTCTTTGTACTAATTAGGTTGCCATATTTGATAATTGAGTACTTCTGCCTTTCCTTTAATTGCTTTACTTGAACCTGTATTCTCTAATTCTGAATTCCAAGGTATTTGGAGGACGACGATGGAATTAAGAAGTACTTCTCTGCGTTTCACTTACATAGTACACTTCCTGTGGCGGTTGTTATTGATGATTTTGGGGATTTTTTCGAGGAAAGGTCTTCAAATTTTCCATTACCTTTTTTTTACTTATCTTTTTATAGGTTTTTCTTTCTCCTTTTCACTTCATCATCTATTGAACAGGCGATGTCAAGAAAAGTATGCTAATCCTCGCGGAAGAGATTTAGCAATGGTTAGAACATTAGCTCTTTGTCAAAATGCCGTGAGTCTAGCAAAGTAGGTTTGCATATATCAGAACTTTCTGTGAATAAATTGATCTCTTAGATTACATCTACACCCTTTTCTTTGCTGCTTATAACTAAGAAGATTTTTCAGTCAATGTAGGCCTTGCCAGCTTGTGTTGTCCGATACACACCATGGAGAGTCCCCAAGGTTGATTTTCATATATAAGAGATGGGTTCCAACCATTTTCACCATAAGAGGTTAGTTTGAGTTGAGTGACTGCTCAACCTAAATTCAAAGCAGATTCCCTTGCTTTTTGTTATTTGTGTTTTACATGGTCAAACCAGAAAATACAGATCTGCAAGTGGAGCAAACTAATTCTGTGGCCTTCATGATGGTTAACTTGGCTGATATGCCATTTTGACCTTTTCTTATTGAATTAATTTTGGTTTATGTTGTAGGTGATGGGGCTGGTTGGTTCATCCTGAGAAGTATTAACAATTGTGGAATCGATTGTTGTTTGAGGACTAAAAGAGCAAAGTATTCGATTGCTCTTCAGTTTCTGAGTTTGGAGGAAATTTCTGAAGACAGTAGGGAACAGTGAATATCTTGGCAGCTTCAGCAATTCATTTGTAAGTATGTCTATTAATCTATTCTTTTTAAAACTTCTGTGATATTTTACTGTTGACATATTAGTATTTGTTGTTATAGAACAATCTTCTGATATCAGTTTCTCTATTGTCTAATCTTAGTTCTGTATAAGATAACTTTTTTGATGGGTGATTCATTGTTGTCTGTATATTATAAATCAATCAAGCTTTTGATATGTCAATCTTGAAACAGCTTGAAATTCTTTCTATTTTCTCACCAAGTGAACAAGCAGTTTGTTTGTGGAAAATTATTGCCTTCCAGACGATCACAAAAAAAGTTCTCTCTGTTGTTCTATTACCATAGCTTGTATTTCTCTTAGAAGAGATGGTCTTTATGTTCTTTCAGAATATCGAGTATTGATCAGCATTGAAGAGCTTTGTAGTTTTATTAATCATTTACAGGCATAAGAGAAAGTCAACAAAAGAGAAGAAAATTTAAAAAACAACTGAAAGTTGACCCTAGGCTCAACACTTGTTTATATGTACTAATTCCCAATAAGATTTTTTTCTAGTAAACTCCTTTTTGATACTCTGGATCACAGAATTCACCACCCAAATCATCACAAGCCTCCGCTGGAAAGACTCTGCAGCAATCATTAAAAAACAAGAATATGAATGCATGTAGAAGTATGAAATAGTGTTGTTTCATAGGAAACGAATTAATAGAGGATGAAAGGTCCTATGGTTTATTGCTTTGAGATCTTACGTCTTGGGACTGTCATATTGTAGATACTCTCTCTCAACTGGCTCTGTAACACTATTCCCTTTTTTGGCCTCTGGTTTTAGCTTTACTTCAGGATACATTTCCACATCACAAGCTTCACCTCCAACAGTGTCACAAGCCTCTGCTGGAAAAACACTGCAAAAATAGACACAAAAGAGTAAATGAAGGTTTTAAAATCAGACATATTGTGGGGTAACAACCAAATATAAAATGATTTGGCTTACGAGGACATGGAGCTGTAGTCAACAGTTGAAGGGTCTTGTCCTACTGCACTTGCCTTTGCTTTTAGGGTTCCTTTGCTTTGCCTTGGCATGGACCTCGTTGGGATTGAGAAGGCCATTGATTTGGCTGTTGGTGGGAGGAGGGAGCATGATGGAGATGCTATGGAAAGAGCTGCCTGGAACTGCATGATGAACAATGGTTCGGTTCGGTCTGCTGTGAAGTTGGTGCTTGGATGTATCTTTAGAGTAGAATTCAGATTTATAAGGTTAAACAGATAAAGTTGGCAAGATATCTCGTGACTGGATAAGGTTTTAAATCAATAATGTTGAGATGAAAGCAACTTTTTTTCTCCTTGAGAAACGAGTGGTTGTGTAGATTTGAATTGACATTATTATATCTCGTCTCTTTCTCCCTCATTTCTTGATATTTCTTATATCACAAACATTCTCGAAGAAAATCCATAGATATGCTTTGATTCCGTT

mRNA sequence

ATGCGTTTTGGCTGTTGTTATATATATTCGATCAGCAACAAGATGGAAAAGTTCTTCTCAGTGCAGCAAATCCACACTCACTGCGAATCTTCCCACTCAATCAAGCTTGTTTCAGGGCCTCCTTCCTGTGGAAAAACCTCCTTGCTTTTTCAGTTCGCTTTTAATTTGGGTCTGGAGGGCAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAAAACAAACCTCCATATCTTTCTCAGGGAGTTGATCCAACATCCGAGACCTTTCAGCGTATACAAATGAAGTATTTGGAGGACGACGATGGAATTAAGAAGTACTTCTCTGCGTTTCACTTACATAGTACACTTCCTGTGGCGGTTGTTATTGATGATTTTGGGGATTTTTTCGAGGAAAGGCGATGTCAAGAAAAGTATGCTAATCCTCGCGGAAGAGATTTAGCAATGGTTAGAACATTAGCTCTTTGTCAAAATGCCGTGAGTCTAGCAAATCAATGTAGGCCTTGCCAGCTTGTGTTGTCCGATACACACCATGGAGAGTCCCCAAGGTTGATTTTCATATATAAGAGATGGGTTCCAACCATTTTCACCATAAGAGGTGATGGGGCTGGTTGGTTCATCCTGAGAAGTATTAACAATTGTGGAATCGATTGTTGTTTGAGGACTAAAAGAGCAAAGTATTCGATTGCTCTTCAGTTTCTGAGTTTGGAGGAAATTTCTGAAGACAGTAGGGAACAGTGA

Coding sequence (CDS)

ATGCGTTTTGGCTGTTGTTATATATATTCGATCAGCAACAAGATGGAAAAGTTCTTCTCAGTGCAGCAAATCCACACTCACTGCGAATCTTCCCACTCAATCAAGCTTGTTTCAGGGCCTCCTTCCTGTGGAAAAACCTCCTTGCTTTTTCAGTTCGCTTTTAATTTGGGTCTGGAGGGCAATGTTACCTTCATCTGCAACCGCCGCAAATTAGAAAACAAACCTCCATATCTTTCTCAGGGAGTTGATCCAACATCCGAGACCTTTCAGCGTATACAAATGAAGTATTTGGAGGACGACGATGGAATTAAGAAGTACTTCTCTGCGTTTCACTTACATAGTACACTTCCTGTGGCGGTTGTTATTGATGATTTTGGGGATTTTTTCGAGGAAAGGCGATGTCAAGAAAAGTATGCTAATCCTCGCGGAAGAGATTTAGCAATGGTTAGAACATTAGCTCTTTGTCAAAATGCCGTGAGTCTAGCAAATCAATGTAGGCCTTGCCAGCTTGTGTTGTCCGATACACACCATGGAGAGTCCCCAAGGTTGATTTTCATATATAAGAGATGGGTTCCAACCATTTTCACCATAAGAGGTGATGGGGCTGGTTGGTTCATCCTGAGAAGTATTAACAATTGTGGAATCGATTGTTGTTTGAGGACTAAAAGAGCAAAGTATTCGATTGCTCTTCAGTTTCTGAGTTTGGAGGAAATTTCTGAAGACAGTAGGGAACAGTGA

Protein sequence

MRFGCCYIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ*

Homology

[Close]

BLAST of CsaV3_6G007790 vs. NCBI nr
Match: XP_011656789.1 (uncharacterized protein LOC101205665 [Cucumis sativus] >KAE8646754.1 hypothetical protein Csa_004885 [Cucumis sativus])

HSP 1 Score: 517.7 bits (1332), Expect = 5.5e-143
Identity = 245/245 (100.00%), Postives = 245/245 (100.00%), Query Frame = 0


Query: 1   MRFGCCYIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEG 60
           MRFGCCYIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEG
Sbjct: 1   MRFGCCYIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEG 60

Query: 61  NVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAV 120
           NVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAV
Sbjct: 61  NVTFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAV 120

Query: 121 VIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGES 180
           VIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGES
Sbjct: 121 VIDDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGES 180

Query: 181 PRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISE 240
           PRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISE
Sbjct: 181 PRLIFIYKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISE 240

Query: 241 DSREQ 246
           DSREQ
Sbjct: 241 DSREQ 245

[Close]

BLAST of CsaV3_6G007790 vs. NCBI nr
Match: KAA0039853.1 (uncharacterized protein E6C27_scaffold122G001280 [Cucumis melo var. makuwa])

HSP 1 Score: 482.3 bits (1240), Expect = 2.6e-132
Identity = 229/239 (95.82%), Postives = 232/239 (97.07%), Query Frame = 0


Query: 7   YIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFIC 66
           Y YSISNKMEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFIC
Sbjct: 48  YAYSISNKMEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFIC 107

Query: 67  NRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFG 126
           NRRKLENKPPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFG
Sbjct: 108 NRRKLENKPPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFG 167

Query: 127 DFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFI 186
           DFFEERRCQ KYANPRGRD+AMVRTLALC NAVSLANQCRPCQLVLSDTHHGESPRLIFI
Sbjct: 168 DFFEERRCQAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFI 227

Query: 187 YKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 246
           YKRWVPTIFTIRGDG  WFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 228 YKRWVPTIFTIRGDGTRWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 286

[Close]

BLAST of CsaV3_6G007790 vs. NCBI nr
Match: XP_008459907.1 (PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >XP_008459908.1 PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >ADN33703.1 hypothetical protein [Cucumis melo subsp. melo])

HSP 1 Score: 473.0 bits (1216), Expect = 1.6e-129
Identity = 224/231 (96.97%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 15  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 74
           MEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 75  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 134
           PPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 135 QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 194
           Q KYANPRGRD+AMVRTLALC NAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 195 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 246
           FTIRGDGAGWFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 181 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]

BLAST of CsaV3_6G007790 vs. NCBI nr
Match: TYK24648.1 (coiled-coil domain-containing protein SCD2 [Cucumis melo var. makuwa])

HSP 1 Score: 470.3 bits (1209), Expect = 1.0e-128
Identity = 226/239 (94.56%), Postives = 230/239 (96.23%), Query Frame = 0


Query: 7   YIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFIC 66
           Y YSISNKMEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFIC
Sbjct: 622 YAYSISNKMEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFIC 681

Query: 67  NRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFG 126
           NR KLENKPPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFG
Sbjct: 682 NRSKLENKPPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFG 741

Query: 127 DFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFI 186
           DFFEERRCQ KYANPRGRD+AMVRTLALC NAVSLA   +PCQLVLSDTHHGESPRLIFI
Sbjct: 742 DFFEERRCQAKYANPRGRDIAMVRTLALCHNAVSLA---KPCQLVLSDTHHGESPRLIFI 801

Query: 187 YKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 246
           YKRWVPTIFTIRGDGAGWFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 802 YKRWVPTIFTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 857

[Close]

BLAST of CsaV3_6G007790 vs. NCBI nr
Match: XP_038906786.1 (uncharacterized protein LOC120092706 isoform X1 [Benincasa hispida])

HSP 1 Score: 456.4 bits (1173), Expect = 1.5e-124
Identity = 216/243 (88.89%), Postives = 225/243 (92.59%), Query Frame = 0


Query: 3   FGCCYIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNV 62
           F   Y+Y I N+MEKFFSV+QIHTHC+SSHSI LVSGPPSCGKTSLLFQFAFNLGL+GNV
Sbjct: 17  FWLFYVYLIRNRMEKFFSVRQIHTHCDSSHSIMLVSGPPSCGKTSLLFQFAFNLGLKGNV 76

Query: 63  TFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVI 122
           TFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDD+GIKKYFSAFHLH TLPVAVVI
Sbjct: 77  TFICNRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDEGIKKYFSAFHLHRTLPVAVVI 136

Query: 123 DDFGDFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPR 182
           DDFGDFFEERRCQ+KYANPRGRDLAMVRTLALC NAVSLAN  RPCQLVLSD +HGESPR
Sbjct: 137 DDFGDFFEERRCQDKYANPRGRDLAMVRTLALCHNAVSLANPSRPCQLVLSDAYHGESPR 196

Query: 183 LIFIYKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDS 242
           LIFIYKRWVPTIFTI GDG GWF LRSINNCG DCCLR + AKYSIALQFLSLEEISEDS
Sbjct: 197 LIFIYKRWVPTIFTITGDGFGWFTLRSINNCGNDCCLRARSAKYSIALQFLSLEEISEDS 256

Query: 243 REQ 246
            EQ
Sbjct: 257 SEQ 259

[Close]

BLAST of CsaV3_6G007790 vs. ExPASy TrEMBL
Match: A0A0A0K9H1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091880 PE=4 SV=1)

HSP 1 Score: 486.9 bits (1252), Expect = 5.0e-134
Identity = 231/231 (100.00%), Postives = 231/231 (100.00%), Query Frame = 0


Query: 15  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 74
           MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 75  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 134
           PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 135 QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 194
           QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 195 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 246
           FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ
Sbjct: 181 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 231

[Close]

BLAST of CsaV3_6G007790 vs. ExPASy TrEMBL
Match: A0A5A7T9Y8 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G001280 PE=4 SV=1)

HSP 1 Score: 482.3 bits (1240), Expect = 1.2e-132
Identity = 229/239 (95.82%), Postives = 232/239 (97.07%), Query Frame = 0


Query: 7   YIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFIC 66
           Y YSISNKMEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFIC
Sbjct: 48  YAYSISNKMEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFIC 107

Query: 67  NRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFG 126
           NRRKLENKPPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFG
Sbjct: 108 NRRKLENKPPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFG 167

Query: 127 DFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFI 186
           DFFEERRCQ KYANPRGRD+AMVRTLALC NAVSLANQCRPCQLVLSDTHHGESPRLIFI
Sbjct: 168 DFFEERRCQAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFI 227

Query: 187 YKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 246
           YKRWVPTIFTIRGDG  WFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 228 YKRWVPTIFTIRGDGTRWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 286

[Close]

BLAST of CsaV3_6G007790 vs. ExPASy TrEMBL
Match: A0A1S3CAT0 (uncharacterized protein LOC103498887 OS=Cucumis melo OX=3656 GN=LOC103498887 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.5e-130
Identity = 224/231 (96.97%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 15  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 74
           MEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 75  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 134
           PPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 135 QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 194
           Q KYANPRGRD+AMVRTLALC NAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 195 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 246
           FTIRGDGAGWFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 181 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]

BLAST of CsaV3_6G007790 vs. ExPASy TrEMBL
Match: E5GB61 (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 7.5e-130
Identity = 224/231 (96.97%), Postives = 227/231 (98.27%), Query Frame = 0


Query: 15  MEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 74
           MEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK
Sbjct: 1   MEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFICNRRKLENK 60

Query: 75  PPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 134
           PPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC
Sbjct: 61  PPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFGDFFEERRC 120

Query: 135 QEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 194
           Q KYANPRGRD+AMVRTLALC NAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI
Sbjct: 121 QAKYANPRGRDIAMVRTLALCHNAVSLANQCRPCQLVLSDTHHGESPRLIFIYKRWVPTI 180

Query: 195 FTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 246
           FTIRGDGAGWFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 181 FTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 231

[Close]

BLAST of CsaV3_6G007790 vs. ExPASy TrEMBL
Match: A0A5D3DM33 (Coiled-coil domain-containing protein SCD2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001970 PE=4 SV=1)

HSP 1 Score: 470.3 bits (1209), Expect = 4.9e-129
Identity = 226/239 (94.56%), Postives = 230/239 (96.23%), Query Frame = 0


Query: 7   YIYSISNKMEKFFSVQQIHTHCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFIC 66
           Y YSISNKMEKFFSVQQIHT CESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFIC
Sbjct: 622 YAYSISNKMEKFFSVQQIHTRCESSHSIKLVSGPPSCGKTSLLFQFAFNLGLEGNVTFIC 681

Query: 67  NRRKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFG 126
           NR KLENKPPYLSQGVDPTSETF+RIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFG
Sbjct: 682 NRSKLENKPPYLSQGVDPTSETFRRIQMKYLEDDDGIKKYFSAFHLHSTLPVAVVIDDFG 741

Query: 127 DFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFI 186
           DFFEERRCQ KYANPRGRD+AMVRTLALC NAVSLA   +PCQLVLSDTHHGESPRLIFI
Sbjct: 742 DFFEERRCQAKYANPRGRDIAMVRTLALCHNAVSLA---KPCQLVLSDTHHGESPRLIFI 801

Query: 187 YKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDSREQ 246
           YKRWVPTIFTIRGDGAGWFILRSINNCG DCCLRTKRAKYSIALQFLSLEEISEDSRE+
Sbjct: 802 YKRWVPTIFTIRGDGAGWFILRSINNCGNDCCLRTKRAKYSIALQFLSLEEISEDSRER 857

[Close]

BLAST of CsaV3_6G007790 vs. TAIR 10
Match: AT3G23255.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown. )

HSP 1 Score: 241.5 bits (615), Expect = 7.1e-64
Identity = 123/236 (52.12%), Postives = 167/236 (70.76%), Query Frame = 0


Query: 15  MEKFFSVQQIHTHCESSH---SIKLVSGPPSCGKTSLLFQFAFNLGLEGNVT---FICNR 74
           +E+FF  ++  +  + +H   ++ L+SGP S GKTSLLFQ A N+      T   FIC+R
Sbjct: 2   VERFFPTKR--SSGDENHRRGNLSLLSGPISSGKTSLLFQLALNVASASTTTRVVFICHR 61

Query: 75  RKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLH--STLPVAVVIDDFG 134
           +K+E+ PP+LSQG+DP+S+ F RIQ+KY++DD+GI+KYF+AFHLH    LP AV+IDDFG
Sbjct: 62  KKIESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDFG 121

Query: 135 DFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFI 194
           D+F +        N R RD+AMVRTLALC NA+  AN+   C+LVLS+T+HG+SPR +FI
Sbjct: 122 DYFSK---LNSVMNSRARDMAMVRTLALCHNAIVDANRKALCELVLSETNHGDSPRSLFI 181

Query: 195 YKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDS 243
           YKRW+P IFTI+G G G F+L S +          + AKYSIALQ+L LE+I +DS
Sbjct: 182 YKRWIPKIFTIKGHGDGSFLLTSNDT-------SERSAKYSIALQYLILEQIIDDS 225

[Close]

BLAST of CsaV3_6G007790 vs. TAIR 10
Match: AT3G23255.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; Has 52 Blast hits to 52 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 10; Fungi - 0; Plants - 38; Viruses - 0; Other Eukaryotes - 4 (source: NCBI BLink). )

HSP 1 Score: 236.5 bits (602), Expect = 2.3e-62
Identity = 122/236 (51.69%), Postives = 166/236 (70.34%), Query Frame = 0


Query: 15  MEKFFSVQQIHTHCESSH---SIKLVSGPPSCGKTSLLFQFAFNLGLEGNVT---FICNR 74
           +E+FF  ++  +  + +H   ++ L+SGP S GKTSLLFQ A N+      T   FIC+R
Sbjct: 2   VERFFPTKR--SSGDENHRRGNLSLLSGPISSGKTSLLFQLALNVASASTTTRVVFICHR 61

Query: 75  RKLENKPPYLSQGVDPTSETFQRIQMKYLEDDDGIKKYFSAFHLH--STLPVAVVIDDFG 134
           +K+E+ PP+LSQG+DP+S+ F RIQ+KY++DD+GI+KYF+AFHLH    LP AV+IDDFG
Sbjct: 62  KKIESNPPFLSQGIDPSSDVFNRIQIKYVDDDEGIRKYFAAFHLHHVDDLPSAVIIDDFG 121

Query: 135 DFFEERRCQEKYANPRGRDLAMVRTLALCQNAVSLANQCRPCQLVLSDTHHGESPRLIFI 194
           D+F +        N R RD+AMVRTLALC NA+  A +   C+LVLS+T+HG+SPR +FI
Sbjct: 122 DYFSK---LNSVMNSRARDMAMVRTLALCHNAIVDAKKAL-CELVLSETNHGDSPRSLFI 181

Query: 195 YKRWVPTIFTIRGDGAGWFILRSINNCGIDCCLRTKRAKYSIALQFLSLEEISEDS 243
           YKRW+P IFTI+G G G F+L S +          + AKYSIALQ+L LE+I +DS
Sbjct: 182 YKRWIPKIFTIKGHGDGSFLLTSNDT-------SERSAKYSIALQYLILEQIIDDS 224

The following BLAST results are available for this feature:

BLAST of CsaV3_6G007790 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656789.1	5.5e-143	100.00	uncharacterized protein LOC101205665 [Cucumis sativus] >KAE8646754.1 hypothetica...	[more]
KAA0039853.1	2.6e-132	95.82	uncharacterized protein E6C27_scaffold122G001280 [Cucumis melo var. makuwa]	[more]
XP_008459907.1	1.6e-129	96.97	PREDICTED: uncharacterized protein LOC103498887 [Cucumis melo] >XP_008459908.1 P...	[more]
TYK24648.1	1.0e-128	94.56	coiled-coil domain-containing protein SCD2 [Cucumis melo var. makuwa]	[more]
XP_038906786.1	1.5e-124	88.89	uncharacterized protein LOC120092706 isoform X1 [Benincasa hispida]	[more]

BLAST of CsaV3_6G007790 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of CsaV3_6G007790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9H1	5.0e-134	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091880 PE=4 SV=1	[more]
A0A5A7T9Y8	1.2e-132	95.82	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold...	[more]
A0A1S3CAT0	7.5e-130	96.97	uncharacterized protein LOC103498887 OS=Cucumis melo OX=3656 GN=LOC103498887 PE=...	[more]
E5GB61	7.5e-130	96.97	Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1	[more]
A0A5D3DM33	4.9e-129	94.56	Coiled-coil domain-containing protein SCD2 OS=Cucumis melo var. makuwa OX=119469...	[more]

BLAST of CsaV3_6G007790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G23255.2	7.1e-64	52.12	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G23255.1	2.3e-62	51.69	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 28..202 e-value: 6.5E-6 score: 28.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 33..177
None	No IPR available	PANTHER	PTHR28653	FAMILY NOT NAMED	coord: 15..243

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G007790.1	CsaV3_6G007790.1	mRNA