CsaV3_6G004920 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_6G004920
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr6: 4145378 .. 4145794 (-)
RNA-Seq ExpressionCsaV3_6G004920
SyntenyCsaV3_6G004920
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCAAGGCAACTGCAAATCATACATTCTTCACAAGGCACAGCCCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTCTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGTCGCCGTTGGAATGCTTGCTTGGATTATGGATATGAGTTTGAGGATCCTGTCATAGAGTTGAACCAAGAAGCAACAGTTGTGACTACGCAACGAGTGAATACCACCGAGCCGGAGAATGGCAATGATGAGATGTTCTTCAGTAGAGAGCAACAAGCTTCTATGTGGCACAAGAACATTCTCATGGGTGGGAAATGCCAGCTACCGGACTTCTCAGGAGTCATATTATACGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTCCTTTACTAACCTGGAAGTGA

mRNA sequence

ATGGCAAGGCAACTGCAAATCATACATTCTTCACAAGGCACAGCCCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTCTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGTCGCCGTTGGAATGCTTGCTTGGATTATGGATATGAGTTTGAGGATCCTGTCATAGAGTTGAACCAAGAAGCAACAGTTGTGACTACGCAACGAGTGAATACCACCGAGCCGGAGAATGGCAATGATGAGATGTTCTTCAGTAGAGAGCAACAAGCTTCTATGTGGCACAAGAACATTCTCATGGGTGGGAAATGCCAGCTACCGGACTTCTCAGGAGTCATATTATACGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTCCTTTACTAACCTGGAAGTGA

Coding sequence (CDS)

ATGGCAAGGCAACTGCAAATCATACATTCTTCACAAGGCACAGCCCAGGTTGGCATGGCTGGTGTGAGCCTTCTCCTCTGTGCTTTTGCATTGTTCATGTGTGCTTCCCATGCCCGAAAATGGCGTCGCCGTTGGAATGCTTGCTTGGATTATGGATATGAGTTTGAGGATCCTGTCATAGAGTTGAACCAAGAAGCAACAGTTGTGACTACGCAACGAGTGAATACCACCGAGCCGGAGAATGGCAATGATGAGATGTTCTTCAGTAGAGAGCAACAAGCTTCTATGTGGCACAAGAACATTCTCATGGGTGGGAAATGCCAGCTACCGGACTTCTCAGGAGTCATATTATACGACCCCAATGGAAATGCTGTAACCCCTGCCAAAACTCCGCGTCCTTTACTAACCTGGAAGTGA

Protein sequence

MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRPLLTWK*
Homology
[Close]
BLAST of CsaV3_6G004920 vs. NCBI nr
Match: XP_011656615.1 (uncharacterized protein LOC105435757 [Cucumis sativus] >KGN46105.1 hypothetical protein Csa_004865 [Cucumis sativus])

HSP 1 Score: 291.2 bits (744), Expect = 4.7e-75
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60
           MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI
Sbjct: 1   MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60

Query: 61  ELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDP 120
           ELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDP
Sbjct: 61  ELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDP 120

Query: 121 NGNAVTPAKTPRPLLTWK 139
           NGNAVTPAKTPRPLLTWK
Sbjct: 121 NGNAVTPAKTPRPLLTWK 138

[Close]
BLAST of CsaV3_6G004920 vs. NCBI nr
Match: XP_008456721.1 (PREDICTED: uncharacterized protein LOC103496580 [Cucumis melo] >KAA0031627.1 putative Nucleolar protein 16 [Cucumis melo var. makuwa] >TYK04482.1 putative Nucleolar protein 16 [Cucumis melo var. makuwa])

HSP 1 Score: 275.8 bits (704), Expect = 2.1e-70
Identity = 130/138 (94.20%), Postives = 133/138 (96.38%), Query Frame = 0 

Query: 1   MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60
           MARQLQIIHSSQGT QVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI
Sbjct: 1   MARQLQIIHSSQGTTQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60

Query: 61  ELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDP 120
           ELNQEATVVTT +VN TEPEN N+EMFFSREQQAS+WHKNILMGGKCQLPDFSGVILYDP
Sbjct: 61  ELNQEATVVTTGQVNATEPENDNNEMFFSREQQASIWHKNILMGGKCQLPDFSGVILYDP 120

Query: 121 NGNAVTPAKTPRPLLTWK 139
           NGN VTPAKTPRPLLTWK
Sbjct: 121 NGNVVTPAKTPRPLLTWK 138

[Close]
BLAST of CsaV3_6G004920 vs. NCBI nr
Match: XP_038886392.1 (uncharacterized protein LOC120076591 [Benincasa hispida])

HSP 1 Score: 263.1 bits (671), Expect = 1.4e-66
Identity = 127/143 (88.81%), Postives = 132/143 (92.31%), Query Frame = 0 

Query: 1   MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60
           MARQLQ++H SQ TAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI
Sbjct: 57  MARQLQMMHPSQATAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 116

Query: 61  ELNQEATVVTTQR-----VNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGV 120
           ELNQEATV+TTQR     VN TE EN NDEMFFSREQQA++W KNILMGGKCQLPDFSGV
Sbjct: 117 ELNQEATVMTTQRVNACVVNATESENVNDEMFFSREQQAAIWQKNILMGGKCQLPDFSGV 176

Query: 121 ILYDPNGNAVTPAKTPRPLLTWK 139
           ILYDPNGNAVTPAKTPRPLLTWK
Sbjct: 177 ILYDPNGNAVTPAKTPRPLLTWK 199

[Close]
BLAST of CsaV3_6G004920 vs. NCBI nr
Match: XP_022134433.1 (uncharacterized protein LOC111006683 [Momordica charantia])

HSP 1 Score: 260.4 bits (664), Expect = 9.0e-66
Identity = 122/138 (88.41%), Postives = 128/138 (92.75%), Query Frame = 0 

Query: 1   MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60
           MARQLQI+H  QGTAQ+GMAGVSLL CAFALFMCASHARKWRRRWNACLDYG+EFEDPVI
Sbjct: 1   MARQLQILHPPQGTAQIGMAGVSLLFCAFALFMCASHARKWRRRWNACLDYGFEFEDPVI 60

Query: 61  ELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDP 120
           ELNQEATVVTT R N TE ENGNDEMFFSREQQA++W KNILMGGKCQLPDFSGVILYD 
Sbjct: 61  ELNQEATVVTTHRANATELENGNDEMFFSREQQAAVWQKNILMGGKCQLPDFSGVILYDA 120

Query: 121 NGNAVTPAKTPRPLLTWK 139
           +GNAVTPAKTP PLLTWK
Sbjct: 121 DGNAVTPAKTPYPLLTWK 138

[Close]
BLAST of CsaV3_6G004920 vs. NCBI nr
Match: XP_023512486.1 (uncharacterized protein LOC111777221 [Cucurbita pepo subsp. pepo] >KAG6602206.1 hypothetical protein SDJN03_07439, partial [Cucurbita argyrosperma subsp. sororia] >KAG7032888.1 hypothetical protein SDJN02_06938, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 255.4 bits (651), Expect = 2.9e-64
Identity = 125/144 (86.81%), Postives = 131/144 (90.97%), Query Frame = 0 

Query: 1   MARQLQ-IIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQ ++HSSQ TAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV
Sbjct: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVVTTQRVNT-----TEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSG 120
           IELNQEATVVTTQRVNT     TEPENGNDEMFFSREQ+A++W KNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTQRVNTCVVNATEPENGNDEMFFSREQRAAVWEKNILMGGKCQLPDFSG 120

Query: 121 VILYDPNGNAVTPAKTPRPLLTWK 139
           VILYD NGN VTPA+T  PLLTWK
Sbjct: 121 VILYDSNGNVVTPARTQLPLLTWK 144

[Close]
BLAST of CsaV3_6G004920 vs. ExPASy TrEMBL
Match: A0A0A0K8P1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052800 PE=4 SV=1)

HSP 1 Score: 291.2 bits (744), Expect = 2.3e-75
Identity = 138/138 (100.00%), Postives = 138/138 (100.00%), Query Frame = 0 

Query: 1   MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60
           MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI
Sbjct: 1   MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60

Query: 61  ELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDP 120
           ELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDP
Sbjct: 61  ELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDP 120

Query: 121 NGNAVTPAKTPRPLLTWK 139
           NGNAVTPAKTPRPLLTWK
Sbjct: 121 NGNAVTPAKTPRPLLTWK 138

[Close]
BLAST of CsaV3_6G004920 vs. ExPASy TrEMBL
Match: A0A5A7SQ79 (Putative Nucleolar protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00920 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.0e-70
Identity = 130/138 (94.20%), Postives = 133/138 (96.38%), Query Frame = 0 

Query: 1   MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60
           MARQLQIIHSSQGT QVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI
Sbjct: 1   MARQLQIIHSSQGTTQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60

Query: 61  ELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDP 120
           ELNQEATVVTT +VN TEPEN N+EMFFSREQQAS+WHKNILMGGKCQLPDFSGVILYDP
Sbjct: 61  ELNQEATVVTTGQVNATEPENDNNEMFFSREQQASIWHKNILMGGKCQLPDFSGVILYDP 120

Query: 121 NGNAVTPAKTPRPLLTWK 139
           NGN VTPAKTPRPLLTWK
Sbjct: 121 NGNVVTPAKTPRPLLTWK 138

[Close]
BLAST of CsaV3_6G004920 vs. ExPASy TrEMBL
Match: A0A1S3C3W7 (uncharacterized protein LOC103496580 OS=Cucumis melo OX=3656 GN=LOC103496580 PE=4 SV=1)

HSP 1 Score: 275.8 bits (704), Expect = 1.0e-70
Identity = 130/138 (94.20%), Postives = 133/138 (96.38%), Query Frame = 0 

Query: 1   MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60
           MARQLQIIHSSQGT QVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI
Sbjct: 1   MARQLQIIHSSQGTTQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60

Query: 61  ELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDP 120
           ELNQEATVVTT +VN TEPEN N+EMFFSREQQAS+WHKNILMGGKCQLPDFSGVILYDP
Sbjct: 61  ELNQEATVVTTGQVNATEPENDNNEMFFSREQQASIWHKNILMGGKCQLPDFSGVILYDP 120

Query: 121 NGNAVTPAKTPRPLLTWK 139
           NGN VTPAKTPRPLLTWK
Sbjct: 121 NGNVVTPAKTPRPLLTWK 138

[Close]
BLAST of CsaV3_6G004920 vs. ExPASy TrEMBL
Match: A0A6J1C1Z5 (uncharacterized protein LOC111006683 OS=Momordica charantia OX=3673 GN=LOC111006683 PE=4 SV=1)

HSP 1 Score: 260.4 bits (664), Expect = 4.3e-66
Identity = 122/138 (88.41%), Postives = 128/138 (92.75%), Query Frame = 0 

Query: 1   MARQLQIIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVI 60
           MARQLQI+H  QGTAQ+GMAGVSLL CAFALFMCASHARKWRRRWNACLDYG+EFEDPVI
Sbjct: 1   MARQLQILHPPQGTAQIGMAGVSLLFCAFALFMCASHARKWRRRWNACLDYGFEFEDPVI 60

Query: 61  ELNQEATVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDP 120
           ELNQEATVVTT R N TE ENGNDEMFFSREQQA++W KNILMGGKCQLPDFSGVILYD 
Sbjct: 61  ELNQEATVVTTHRANATELENGNDEMFFSREQQAAVWQKNILMGGKCQLPDFSGVILYDA 120

Query: 121 NGNAVTPAKTPRPLLTWK 139
           +GNAVTPAKTP PLLTWK
Sbjct: 121 DGNAVTPAKTPYPLLTWK 138

[Close]
BLAST of CsaV3_6G004920 vs. ExPASy TrEMBL
Match: A0A6J1JR28 (uncharacterized protein LOC111487577 OS=Cucurbita maxima OX=3661 GN=LOC111487577 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.2e-63
Identity = 124/144 (86.11%), Postives = 130/144 (90.28%), Query Frame = 0 

Query: 1   MARQLQ-IIHSSQGTAQVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60
           MARQLQ ++HSSQ TAQVGMAG SLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV
Sbjct: 1   MARQLQMMMHSSQATAQVGMAGASLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPV 60

Query: 61  IELNQEATVVTTQRVNT-----TEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSG 120
           IELNQEATVVTTQRVNT     TEPEN NDEMFFSREQ+A++W KNILMGGKCQLPDFSG
Sbjct: 61  IELNQEATVVTTQRVNTCVVNATEPENDNDEMFFSREQRATVWEKNILMGGKCQLPDFSG 120

Query: 121 VILYDPNGNAVTPAKTPRPLLTWK 139
           VILYD NGN VTPA+T  PLLTWK
Sbjct: 121 VILYDSNGNVVTPARTQFPLLTWK 144

[Close]
BLAST of CsaV3_6G004920 vs. TAIR 10
Match: AT1G71740.1 (unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 102.1 bits (253), Expect = 3.8e-22
Identity = 58/124 (46.77%), Postives = 74/124 (59.68%), Query Frame = 0 

Query: 16  QVGMAGVSLLLCAFALFMCASHARKWRRRWNACLDYGYEFEDPVIELNQEATVVTTQRVN 75
           ++G+A  S+      L   ASH+++  RRW AC  YG    +PVI L  + T++    V 
Sbjct: 17  KMGLASASV-----RLVNLASHSKRKLRRWAAC--YGSRDYEPVIYLQNDMTMMNNGGV- 76

Query: 76  TTEPENGNDEMFFSREQ-QASMWHKNILMGGKCQLPDFSGVILYDPNGNAVTPAKTPRPL 135
                NG+  M  S +Q +  +W KNILMGGKCQLPDFSGVILYD +G  V PAK   PL
Sbjct: 77  --YEYNGDPSMLLSGDQRRGPLWQKNILMGGKCQLPDFSGVILYDADGQVVPPAKNSLPL 130

Query: 136 LTWK 139
           LTWK
Sbjct: 137 LTWK 130

[Close]
BLAST of CsaV3_6G004920 vs. TAIR 10
Match: AT1G49000.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: stem; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G18560.1); Has 105 Blast hits to 105 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 105; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 7.0e-08
Identity = 25/68 (36.76%), Postives = 40/68 (58.82%), Query Frame = 0 

Query: 67  TVVTTQRVNTTEPENGNDEMFFSREQQASMWHKNILMGGKCQLPDFSGVILYDPNGNAV- 126
           T ++ + +     +N  +E   + E++  +W + ILMGGKC+  DFSGVI YD NG  + 
Sbjct: 78  TTLSNKAMTMVRRKNPPEEKATAMEEEHGLWQREILMGGKCEPLDFSGVIYYDSNGRLLN 137

Query: 127 -TPAKTPR 133
             P ++PR
Sbjct: 138 EVPPRSPR 145

[Close]
BLAST of CsaV3_6G004920 vs. TAIR 10
Match: AT3G18560.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G49000.1); Has 95 Blast hits to 95 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 95; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 48.9 bits (115), Expect = 3.8e-06
Identity = 21/47 (44.68%), Postives = 32/47 (68.09%), Query Frame = 0 

Query: 91  EQQASMWHKNILMGGKCQLPDFSGVILYDPNGNAV--TPAKTPRPLL 136
           E++  +W + ILMGGKC+  D+SGVI YD +G+ +   P ++PR  L
Sbjct: 128 EEEYGVWQREILMGGKCEPLDYSGVIYYDCSGHQLKQVPPRSPRASL 174

[Close]
BLAST of CsaV3_6G004920 vs. TAIR 10
Match: AT3G14760.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.04 four leaves visible, LP.02 two leaves visible; Has 63 Blast hits to 63 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 63; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 43.1 bits (100), Expect = 2.1e-04
Identity = 17/28 (60.71%), Postives = 22/28 (78.57%), Query Frame = 0 

Query: 96  MWHKNILMGGKCQLPDFSGVILYDPNGN 124
           +W + ILMG KC+LP FSG+ILYD  G+
Sbjct: 116 VWQRPILMGEKCELPRFSGLILYDECGH 143

The following BLAST results are available for this feature:
BLAST of CsaV3_6G004920 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011656615.14.7e-75100.00uncharacterized protein LOC105435757 [Cucumis sativus] >KGN46105.1 hypothetical ... [more]
XP_008456721.12.1e-7094.20PREDICTED: uncharacterized protein LOC103496580 [Cucumis melo] >KAA0031627.1 put... [more]
XP_038886392.11.4e-6688.81uncharacterized protein LOC120076591 [Benincasa hispida][more]
XP_022134433.19.0e-6688.41uncharacterized protein LOC111006683 [Momordica charantia][more]
XP_023512486.12.9e-6486.81uncharacterized protein LOC111777221 [Cucurbita pepo subsp. pepo] >KAG6602206.1 ... [more]
BLAST of CsaV3_6G004920 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_6G004920 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K8P12.3e-75100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G052800 PE=4 SV=1[more]
A0A5A7SQ791.0e-7094.20Putative Nucleolar protein 16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_sc... [more]
A0A1S3C3W71.0e-7094.20uncharacterized protein LOC103496580 OS=Cucumis melo OX=3656 GN=LOC103496580 PE=... [more]
A0A6J1C1Z54.3e-6688.41uncharacterized protein LOC111006683 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A6J1JR281.2e-6386.11uncharacterized protein LOC111487577 OS=Cucurbita maxima OX=3661 GN=LOC111487577... [more]
BLAST of CsaV3_6G004920 vs. TAIR 10
Match NameE-valueIdentityDescription
AT1G71740.13.8e-2246.77unknown protein; Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bac... [more]
AT1G49000.17.0e-0836.76unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G18560.13.8e-0644.68unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G14760.12.1e-0460.71unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR33237:SF4F14O23.12coord: 1..138
NoneNo IPR availablePANTHERPTHR33237F2P16.13 PROTEIN-RELATEDcoord: 1..138

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_6G004920.1CsaV3_6G004920.1mRNA