CsaV3_6G004790 (gene) Cucumber (Chinese Long) v3

Overview


Name	CsaV3_6G004790
Type	gene
Organism	Cucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
Description	cleavage stimulating factor 64
Location	chr6: 4054994 .. 4063806 (-)
RNA-Seq Expression	CsaV3_6G004790
Synteny	CsaV3_6G004790

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AATATTAAGAGTTGCAGAAAGAGGGGCGACCTCTAAAATTAAATCTGGTTGGAATAGGATCTTCTCCGAACGTTTCATTCATTCATTCTTCTTCTTCTTCTTCTTCTTCGCCGTCGCCGTTGTTTTCATCGGAATCTTCAATTTCTTTATTCGTTTTCTTCCATAATCTTTGTTCTTCAATACGAACCATCACTCACTTACCAACTCTATTGATCTGCGGTCCTTTTCCGGACAGCTTCTCTGCAGTTTTTTTTTTTAGCTGCAGTGCATCAGTGGTAGCCGGATTAGTTTAATAACTATGCTGAGGAGGAAGAAGATGAAGCACTGCTTCAGCTTCTTCTTCTTCTTCTGTTGATTCATGGCCTCCACTCAGCACCGCTGTGTTTTCGGTATGTTCTGTATTTCTTCTTCGGTTGATTCTCTGATTTTGCGTTTTGATTTGATGGGGAGCTGTTTTTTTATGTTGAAGAATGGTGGATTTTTGTTTTATGTATTGTCGCTTCTTATTTTGCTTTCAATTGCTCCTGGCTTTTATTAATCTGGGTCACGATTGAATTTTTGTGTTTGTGCCTTATTCTGTTGTTCAATTTTGCTTTCAGTTGGGAATATACCTTATGATGCTACTGAAGAGCAGCTTATAGAAATCTGCCAAGAAGTTGGGCCCGTAGTGTCGTTCAGGTCCGTGTTCTCGGCTCTTTTTTTTCTTCTTTTTTCTGGGAAATGAACCCTAAAATTGATATTGGATTGACATTTACGATTTAGAATGAGATTGATAGCTTTGAAGCCGTAAAATTGATTTCTTTTTCTTAATTATTATTTTTAAAGCCTCCTTGAACTTTCTGTAGTTTCCTTGCCGTATATTTAGCCTCCTTCTATGTTCTGTTTTGGACCTTTGGTGGTTTACTATGTCTTTCTCTAATGGGGAAAGATGAGTGGCTATGCAATGCTAGAATAGAATCCTTTCTTTTTGCTAGGTTTTGTCTACTGCCAGCCCATTACCAAGCCAAGGGCTGAGCATTCTGTTCTCAATTGTTTTCTATAGGTCAGTCATACGCATATAGTCTTGTTAATTCTATTTCGTGGCTCATAAATTGGCTATCTCTGGTCTTATTGATTGGGGGTTGTAGTGGAATGCCAGTGTATATTTTGATTAAAATTGTAGCGTGGTGTTAGTGTTATATCTTATTACATCTTTTTAATAAATGTAAGACGTTTTGGTTCGGTCACGGTATAGTGTGCATGAAAAGAGGTCTTTATCTAATCTGTAAACAATGAACTACAACTAACACACTACTTTTGGAATTTGAGCACAGTATTGGAAGCTGTAACTTTTAATTAACTGCAGTAAGCTGGGGCATGTTCTGTGCTTTGGGATATTTGGGGAGAGAGGAATGATAGGGTTTTTAGAGGTAGGAAAAGGGACCCTTGTGAGGTTTGGTGCTTAGCTAGATTTCATGTGTACCTTTGGGCTTCAGTGTTGCAGCTCTTTTGTAAATGTTCTCTTGGAAATATTTTACTTAATCGGAGCCCCTTTCTTTAGTTGGGGTGTTTTGGTGGACTTTTATTTTTATACGCCCTTGTGTTTTCTCAATGAAGTTAGTTGCTTTATCAAAAAAATTAAAATTAAAATTAAATAACTGCAATAAGCTATTCTTGAAAATCACCATCTTCTGAGTTTCCAATCCAAAAACACGAAAGAAAAAGAAAACAAACTAAGTGCAGGACATCAATTATGAGAACCCATTTTCCCTAACATCTGAGTCTCTTAGGAATTTAAATATTGTATTAATTTATTATTTCAGCTACCATTTTCCCATACATTTCAAAGTTAAAATTAACAGTTCCTTCGTTTTTTAGATTAGTTATTGACAGAGAAACTGGAAAACCTAAAGGCTATGGGTTTTGTGAGTACAAGGATGAAGAAACAGCTTTGAGTGCTCGTCGTAATTTACAAGGTTATGAAATTAATGGTCGACAATTACGAGTTGATTTTGCTGAGAATGACAAGGGTGCAGACAGAAATAGAGAACAGGTGAAATATTTAACCTCTTGCAATCTGGCTCATTGACTATTTTTGTCCATTCAGCTAGTTACATTGGGATTTTGGTATTATTTTCAATAAAATACTTTTTAAATATTATTGACTTTATCATACAAAAACTTAGATTATAATGCTGGCATATTTCAAAGCGTGTACTGTAAATATTAAATTGATTTAATTTTTCAGACCTTGGAGGCTTCTTTTATTACTCTGCTTATTGTAATTTTCAACCAGTAGTTCAAGAAACAAGTTCGCAGGAGGTTGTTTTGTAGTCTTTACCCTGATATTTTTGTTTTTCATGTTTAAAATGGATTCAAATATATATTTTCGATTGCTTTATATTAACCTTCTTAATGCCTAGGTTAGATCTGAATTTTATTATATGTACATGTATATAAAAGACTGGTATTGCTCTGACTAACATAGTATTAACAAGAACAAAAATATTTGAGAAGATTAATAGACTCTTCTGTAGTTATGATCTTGGTTTGTTTTTATTAGATTGGAACCCCTTTTTGTAGTTACTTTTTGGGCTCCCTCTTGCTATTGGTATTTGTTAGCCTCTTTTGTTTGCCCTTCTATTCCTTTCATTTTTCTGCTCGATGAGAGTTTAATTTCTTACAAATATATTGGTACTTGTGAACTTTTTTATGATAGGATTCTTTTGAAATGTTGGCAATGTTCTTTGAGAAGAAAAGGATACAATTTTTTTATCTGAAACTGAAAGTTCTACAGAGGATTTCATTGCTTATTTCTATTTTCTTTTATTATTTCTATTTTTTTATCGGAAAGGTTCTTTTGGTAAGTATACCTCTGAGTTAAAAACTGAAATTAAAAAATCCATCTAGAATTCATAAATCCAAAGGAAATATTCCAAAAATAAAATACTCAACTCAGTCTTCAGCTGCATTTTTTTTTTTTCCTTCAATCATCATCATACTCATTTGCAATCAAATGACTTGTCAACTTGCTGAAACTATGCATTTGAAATCAGAGTATTTAAATAAATAAAAAATTTCCTTTTATGTGCTCTTCCACCAATACACCTTGACTACATATAGCATGTTAATTACGATTTGATTTGAACAATTCTTCTTCTCTCTTTCAGGGTCGTGGAGGACCTGGATTGGTTGCAAATGCTGGTTAGTTTTCTCTATCTTAAATGTTTTCTTGCCTTCTGGTTTTTGTGTTAACATGAAAGTTGCTAAATGAACAATTAGGTGGCCCAACACCCCATGGGGAAGCCAGTCAACATCAACCAATTGGTCTTCACATAGCTATCACTGCTGCTGCTGTCATGGCGGGAGCCCTTGGTGGTGCACAAGCAGCTTCTAATCAGAATAATTTACAGAGTGCAACAATGCCCAACGATCCGTTAACTTTACATCTGGCTAAACTTTCTAGGAGTCAGCTTACTGAAGTTATGTCAGGGCTAAAGGTAACCTTTTGAGTTGTTCCCTCCTCTCTCCTTAGTTTCCTGAATGGCTCCTGTTGATTGGTACATTGTTTGGACTTAGGCAATGGCTACACAAAACAAGGATTTGGCTCGACAGCTATTGCTGGCAAGACCACAACTATCAAAAGCTCTTTTCCAGGTACCTACTTACCTTTCCTCCTTTAAGCATAGAGAAGATCCTCCATATCTAGCGTGTTTTACTTCTTCTCTTTTTTCCTTTCCTTTTCTGTATAATATTATTTTCATAATTACTACTAGTTATATTGATGAAATTCTGCCTTATGTTACTCTTATGATCTTGTTGTCTATGTGCGTCAACCTTCTAAACATTGTTATGCAATGTATTTCTTCATTATCTCTTAGTCTAGTAGTTACTGGAGAAAAACAAGAAAAAGTATTTAGAGCAAGTCATGACATGAATAAAATATGAGATTGAAGGTAGCTGGTTGAACCCAATTGGTTTTGTAGGTGTCAAGGGAACCAAAGTAGATCATTACTATACATGTTAATTATTGTTTCATCTAGCTTGCCATTCATCCTCGATTCCTCATGCATGATGTTGAGAATGTGTATATGCACATATATAAAGTACTCACTCCTATTTTTCACGCATTTAAGTTCAATAGGTTTATTGCACTTCATTACGAATTGCATCTTTTTTAAGAAACCGAGCTTCACTAAGAAAAATTAGAACAACTTACGTCCTGTAGATCACAAATTATATCGTTGAGATAAGAAACATTGTTTTACTTCTGGCATTTTCGATGAACAAAAATGATATTTCTAGAAGTGTCAACTCTTAATTCTTTTTATAGAGACAGACTAACCGAAGCACTTGTTAAGTTAGGAAGAAAAGAAGGTTTTGATGGGAATTAATGAAAGTGTTCTTGCCTCTGTCATTAGCTAGGGTGGTCTTCAGTTATAATGTTTCAGTCACCTTTCAATGGTCCCTTAATTATGTTGATGTATTTCACTCGTTGCTAGCATGGTTCATATGTTAAAAAAATTAAAAGTCTAATTGCATAAGAAACACACATTTGTAGAACATTTCAGTCACACACTCTTCTTTTAGCAGATGCTCATAACTAGAGGACCCTCTCTTTCCCCTTAAATTATGAGAATTGTGCAAAGACATAATTTTATGAACTTTTCTAATGTAAAGCTACTAGAACAGTAATATGCGAAATGCACACCTGGAACCTTCTCATCAGGTTTAAGTCAAAGCTACTCTTTTATCGTTAATTTTCTAGCTTTTATGGCTCAAAGCATCTTTAGGTCCTAATATCAGAACCAATTTTTGTGTTAAATTTTGATTGGAAACCTATGTTGTGAGAATCAAAATAGTTCTTTGTTTAGACGGAAAAAGGGAGAGAGAAGGCTTCAAATAAATATTTGGGAAAGAAGAGACATGCAATATTTATATTTTTAGTTGTACCATATTAGTTATTTCTTTGATAACTTTCTTGCTTCTCACAATTTTATGGACTATATCTCTTCTTGTATGCAATATCAGCTAAACATTCTTTTTTCTCCTCTTTTCTGTAATTTTGTTTGCAGTCACAGATAATGCTTGGCATGGTCACTCCACAAGTGGTATTTCTCTTCACTGCTTATACTGTTACTATTATTATCATCATTACTATTATAATTATTTGTGTGTGTTTTATAGCTGTTAAGATTTTCTCATGCCAAATTCTCCTTCTTTGATTGCTGCAGTTACAGAAGCCTAATTTACAGCAATCTGCTACTCATCCTCAGCTTCCTTTGCATGAGAGTCAGCAGGGTCAGCCATCATCTCTTCAAATTCAACCAGGCCTGCCCCCTCTTGCACCTAACAGGATGCAAACTGGTTTTGTACCTAAAAAAGAAACACAATCGTCTCTCATGCCCCAAAATCCTTTGGCTCCCCATCAGTTTTCTGCATCCCAACGACCTTCACTTCAATCTCAAATTCAGCCATCACACACTTTACAAGGCTCTTTGACCGGAATACCTGGAGGCTCGTCACTTCCTTCCATAAGTTTGCAGGGAAATATATCTATTAGGCAACAGGTTCAGGCGCCCTCCTCCTCCTCTTTAAAGCAGCACATGCGTCCTCCTCCTCAGCAATATTTGGGGCATGGTGGAGCTTTAATTCCTGGCCATAACACTCATATTACTAATCCAGAAGCTAAACCATCTCTTTTGCCTCACCCTTCCTTATCAGATGCAGACTTTCAGGTTCTACTTTATGTTTTTTTTATAGTTTAATATATAAATGTCTTTGAACTAGAACATAGATGTCAATCCTATTTTTTCTTTTCCCAAATCTTTAATAGGAAGGGCTTTCTCCCCTCCTCTGTATTTTACTTGGAGAGCAGGTAAGGCCACTATAGCAAAAGTTGCTTTCCAACCATGAAGTTTACCTTTGATAGAATGACAAGCTAAAGCTTGATTCAATACAAATGTGGAGAGGAAACTATAATGCAACTAACTTTTATGTTAATGTTTTGCTGACTGTTATTGGAGAAAATTGAAATGTTCTTAATTTATTTCTCATGTGTATGTGTCGACTTAATGAGGAACACTTTATGATCAATAAATGAGGCGTTGTTTATATGGCTATATGCGTACTTTTATCAGTTCTTTTTTCCTTTTTGAGAATAAACAAAATTTTCATTCGTGTATGTAAAAACAAAAGGACAAACCACCAAACCATTGAAGTAAAAATGCCAAAAATTACAAGAGTCAAACCACAAGGAACCACTAAAGATAAAAAACCCGACCATCAGACGGGCAAAACAAGTACAGCTGCCCAAATGACAGAACTCTGGAAAAGAGATCCAAAACAACTCCAGCTAGATGATAAAGATGTTTCTCTACTTCAAATCTACTAATTGCTATCAAGAGTGTTATTTATTTATAATAATATCAAGATATGTAACTTTTCATTGAAAATAAGATAGACTGATGGTCAAAGGAGTTGGAGAGAGTAATTGAAAACACAACCATACTCAAACAAGGAGCCTGCTACTAGCTTGAAAAATTTAATAAGATCTAGTAATATCTTGAAAGTCTTTGGAGCTTGCTCCCCTTGGTTCGGAAGTCTTTTTTTCTTTTCCTTTCTTTTCATTTTCTGTCATCTTGTTTCTGACTTGCTCTTCATAACAGCCTGGCCCCTCCACAGCGTATAGTACACCTCAGATAGTGGGCAGTGATGTTGATAAGTCTTCTCCAGTTCCTCTTGGTGTTGATGGTAAAAGAACTATGCTTCATGGCTTTTCAGGAACAACTAATCGCCCAGTAAAGCAAATAAAATTAGAGGATGGAAAAGGCAGCTCTTTCTTAGCCGGAGGTCTAAGTACATCAATAGGTACCAATGGATCCGGGCAACTTGGAATTGCCTCAGATCCCAATGTGACGGGAACCCAACTCTCTGAGAAACCAACTTCATTGGTACGTGATTTATTATCCGAAAATCTTTACTCACTTTCTTGTTCATGGTAATTTTGTTGCATTGGTAGGATTTAATCTTAGCTGCGACTTCAATTTTTCTATCTGATTTTGGTCTTTGTAGTTATCTATCTCATTCTGAATTTGATTTTTTTTATAGTTTTCAGTGCTCATGTCATGTAGAAGAGTTGTGTATAAAAGGTTAGAGTAGTATTTTCAAGTGTGTTTTTGAGAAATTAGAGTCTCACTAACATCTTTTGAGAAATTAGACTCTCACTAAGAAGTATAAAAGGTTAGAGTAGTATTTTCAAGTGTGTTTTTGAGGCATGTAGAATGAGCTTGAGTTTGAGATGCCTTTTTATTGTAGCGCTTTTAAGTGACATACTACTTATTTTGGTTGGTAACGTTTAGTAACAATTTGGTTTTTGGTTTTTAGTTTTCAAAGTTAAGTCTACAAACAACCCTCTCGCCCCTAATTTTTTTTTTTTGCATTTTTATCTACTTTTTATCCATGTTTTAAAAAACGAAGCTAATTTTTTAAAACTAAAAGAATTTCTAAAAAGCTGTTTCTGGAATATTCAACTCTTGTACTCTACAAAAAATGCATGATGTTAGTAAGAAAATGTGAGGAAATAAACTTAATTTTCAAAAAACAAAAACAAAAGAAACAAAAGACGTAATTGTTACCAAATGGAGTCTTAAACGTTTTAGAATTTTCAAAATCACTTTTGAACAAAATACTCTGGAAGTCTGTCTCGCTAAAAGTCAGATTGAACTTGATCAATCCAAGGTTTAAATTTATATTTCCAATTTCCTTCCAGACTGTATTATCTTTATTCTGACTTTTTTCTCTAATTTCAATGCTTAGTCCTGAAAGCGTAACTTATCATAGTGAGATGAACTGTGACTATTTTCATTCATAAGATCAGCCAAAATTTTAATTGTTCAAAGCAACATAGTTCTGAATTGCATTAGTTTTATTCCAATAACATCAACATTTTCTGTTTAATTGCATTCATAGCCAAATTACGATGCTTCAAATTCTTGATCCTATAGGACATGAATTTTTTACTTTACTTGAATATGTTTATGTCTTGGAAGTTTCATTCATCACTATGACAAGATCTCCGCATTCTGATGAAGTTGATCGATATCTTCTAAATCACATGAAATAAACTACCACTCCTGTTCCTTGTTTCTTCTCCAGCTTCCCCAGAACGTTGAATCTGTACTACTGCAACAAGTTTTGAATCTAACTCCCGAACAGCTTAACTCGTTGCCGCTCGAACAGAGGTTGCAAGTTATTGAGCTCCAGCATGCACTTCGCAGAGACCAAATGCGGCCATCCTAGCAAGTAAATTACCCCTGATCAACCCAACAAGTAGATTGTAAAATATTTTGCTCCAGAGAGATTCAGCCAAGTGACAGTCAAAAATACGTGTAAAATTATTGCTTGTCGAAGGGGTCCGAAGCGACGGGTCCTGCCCACAAGGTATGAGTTTTTCCATAAACAGCATTCATGTAAGGCTTACAAGTTTGTGATTATAGTGATTCCTTAATAATAACAAATCAAGATAGGGGAAAAGATCCAACAGTGGAAGAATTTTGATTTATTTTCAGGGTCTCTTTTTTTGGCCGTTACATTTGCCATTTTTGGACTTCTTTCCTTTGCTTCTGCTGTTCATTCCTTGCATGTAACATTTCATTGAGGCTTTTGGTTTTGTTTGTAAAAGAAGAAAAAAAATGCTACAATTTGGATTCTTTAGCTGTTAAGAAGCTTTGATATAAGGGTTTTCTTTTTTTTCTTTCTTAAATATGATTTATAACTATTTTCACTTTATTTATTTCGTCATTTGAAATAACTCAAAATCAGCTAAATATCAG

mRNA sequence

ATGGCCTCCACTCAGCACCGCTGTGTTTTCGTTGGGAATATACCTTATGATGCTACTGAAGAGCAGCTTATAGAAATCTGCCAAGAAGTTGGGCCCGTAGTGTCGTTCAGATTAGTTATTGACAGAGAAACTGGAAAACCTAAAGGCTATGGGTTTTGTGAGTACAAGGATGAAGAAACAGCTTTGAGTGCTCGTCGTAATTTACAAGGTTATGAAATTAATGGTCGACAATTACGAGTTGATTTTGCTGAGAATGACAAGGGTGCAGACAGAAATAGAGAACAGGGTCGTGGAGGACCTGGATTGGTTGCAAATGCTGGTGGCCCAACACCCCATGGGGAAGCCAGTCAACATCAACCAATTGGTCTTCACATAGCTATCACTGCTGCTGCTGTCATGGCGGGAGCCCTTGGTGGTGCACAAGCAGCTTCTAATCAGAATAATTTACAGAGTGCAACAATGCCCAACGATCCGTTAACTTTACATCTGGCTAAACTTTCTAGGAGTCAGCTTACTGAAGTTATGTCAGGGCTAAAGGCAATGGCTACACAAAACAAGGATTTGGCTCGACAGCTATTGCTGGCAAGACCACAACTATCAAAAGCTCTTTTCCAGTCACAGATAATGCTTGGCATGGTCACTCCACAAGTGTTACAGAAGCCTAATTTACAGCAATCTGCTACTCATCCTCAGCTTCCTTTGCATGAGAGTCAGCAGGGTCAGCCATCATCTCTTCAAATTCAACCAGGCCTGCCCCCTCTTGCACCTAACAGGATGCAAACTGGTTTTGTACCTAAAAAAGAAACACAATCGTCTCTCATGCCCCAAAATCCTTTGGCTCCCCATCAGTTTTCTGCATCCCAACGACCTTCACTTCAATCTCAAATTCAGCCATCACACACTTTACAAGGCTCTTTGACCGGAATACCTGGAGGCTCGTCACTTCCTTCCATAAGTTTGCAGGGAAATATATCTATTAGGCAACAGGTTCAGGCGCCCTCCTCCTCCTCTTTAAAGCAGCACATGCGTCCTCCTCCTCAGCAATATTTGGGGCATGGTGGAGCTTTAATTCCTGGCCATAACACTCATATTACTAATCCAGAAGCTAAACCATCTCTTTTGCCTCACCCTTCCTTATCAGATGCAGACTTTCAGGAACAACTAATCGCCCAGTAA

Coding sequence (CDS)

ATGGCCTCCACTCAGCACCGCTGTGTTTTCGTTGGGAATATACCTTATGATGCTACTGAAGAGCAGCTTATAGAAATCTGCCAAGAAGTTGGGCCCGTAGTGTCGTTCAGATTAGTTATTGACAGAGAAACTGGAAAACCTAAAGGCTATGGGTTTTGTGAGTACAAGGATGAAGAAACAGCTTTGAGTGCTCGTCGTAATTTACAAGGTTATGAAATTAATGGTCGACAATTACGAGTTGATTTTGCTGAGAATGACAAGGGTGCAGACAGAAATAGAGAACAGGGTCGTGGAGGACCTGGATTGGTTGCAAATGCTGGTGGCCCAACACCCCATGGGGAAGCCAGTCAACATCAACCAATTGGTCTTCACATAGCTATCACTGCTGCTGCTGTCATGGCGGGAGCCCTTGGTGGTGCACAAGCAGCTTCTAATCAGAATAATTTACAGAGTGCAACAATGCCCAACGATCCGTTAACTTTACATCTGGCTAAACTTTCTAGGAGTCAGCTTACTGAAGTTATGTCAGGGCTAAAGGCAATGGCTACACAAAACAAGGATTTGGCTCGACAGCTATTGCTGGCAAGACCACAACTATCAAAAGCTCTTTTCCAGTCACAGATAATGCTTGGCATGGTCACTCCACAAGTGTTACAGAAGCCTAATTTACAGCAATCTGCTACTCATCCTCAGCTTCCTTTGCATGAGAGTCAGCAGGGTCAGCCATCATCTCTTCAAATTCAACCAGGCCTGCCCCCTCTTGCACCTAACAGGATGCAAACTGGTTTTGTACCTAAAAAAGAAACACAATCGTCTCTCATGCCCCAAAATCCTTTGGCTCCCCATCAGTTTTCTGCATCCCAACGACCTTCACTTCAATCTCAAATTCAGCCATCACACACTTTACAAGGCTCTTTGACCGGAATACCTGGAGGCTCGTCACTTCCTTCCATAAGTTTGCAGGGAAATATATCTATTAGGCAACAGGTTCAGGCGCCCTCCTCCTCCTCTTTAAAGCAGCACATGCGTCCTCCTCCTCAGCAATATTTGGGGCATGGTGGAGCTTTAATTCCTGGCCATAACACTCATATTACTAATCCAGAAGCTAAACCATCTCTTTTGCCTCACCCTTCCTTATCAGATGCAGACTTTCAGGAACAACTAATCGCCCAGTAA

Protein sequence

MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQPIGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQGQPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSHTLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGHNTHITNPEAKPSLLPHPSLSDADFQEQLIAQ*

Homology

[Close]

BLAST of CsaV3_6G004790 vs. NCBI nr
Match: KAE8646656.1 (hypothetical protein Csa_005552 [Cucumis sativus])

HSP 1 Score: 759.2 bits (1959), Expect = 1.7e-215
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH
Sbjct: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360
           TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH
Sbjct: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQEQLIAQ 392
           NTHITNPEAKPSLLPHPSLSDADFQEQLIAQ
Sbjct: 361 NTHITNPEAKPSLLPHPSLSDADFQEQLIAQ 391

[Close]

BLAST of CsaV3_6G004790 vs. NCBI nr
Match: XP_004141001.1 (cleavage stimulating factor 64 [Cucumis sativus])

HSP 1 Score: 748.4 bits (1931), Expect = 3.1e-212
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH
Sbjct: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360
           TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH
Sbjct: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQ 386
           NTHITNPEAKPSLLPHPSLSDADFQ
Sbjct: 361 NTHITNPEAKPSLLPHPSLSDADFQ 385

[Close]

BLAST of CsaV3_6G004790 vs. NCBI nr
Match: XP_008456694.1 (PREDICTED: cleavage stimulating factor 64 [Cucumis melo] >KAA0031656.1 cleavage stimulating factor 64 [Cucumis melo var. makuwa] >TYK04454.1 cleavage stimulating factor 64 [Cucumis melo var. makuwa])

HSP 1 Score: 722.6 bits (1864), Expect = 1.8e-204
Identity = 369/385 (95.84%), Postives = 378/385 (98.18%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHG++SQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGDSSQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQN LQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNTLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHE QQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHEIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSS+QIQPGLPPLAPNRMQTGF+PKKETQ SL PQNPLAPHQFSAS RPSLQSQIQPSH
Sbjct: 241 QPSSVQIQPGLPPLAPNRMQTGFLPKKETQLSLTPQNPLAPHQFSASLRPSLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360
           TLQG+LTGIPGGSSLPSI+LQGNISIRQQVQAP+SSSLKQHMRPPPQQYLGHGGALIPGH
Sbjct: 301 TLQGALTGIPGGSSLPSINLQGNISIRQQVQAPTSSSLKQHMRPPPQQYLGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQ 386
           N HITNPEAKPSLLPHPS+SD DFQ
Sbjct: 361 NAHITNPEAKPSLLPHPSISDVDFQ 385

[Close]

BLAST of CsaV3_6G004790 vs. NCBI nr
Match: XP_038885247.1 (LOW QUALITY PROTEIN: cleavage stimulating factor 64 [Benincasa hispida])

HSP 1 Score: 691.8 bits (1784), Expect = 3.4e-195
Identity = 360/385 (93.51%), Postives = 368/385 (95.58%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQE GPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEXGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTP GE+SQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPQGESSQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAG+LGGAQAAS+QN LQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGSLGGAQAASSQNTLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNL Q +TH +LPLHE QQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLWQPSTHTRLPLHEIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSSLQIQPGLPPLAPNRMQTGFVPKKETQ SL PQNPLAPHQFSAS RP LQSQIQPSH
Sbjct: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQLSLTPQNPLAPHQFSAS-RPPLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360
            LQGSLTGIPGGSSLPSISLQGNIS+RQQVQ P+SSSLKQHMR PPQQY GHGGALIPGH
Sbjct: 301 ALQGSLTGIPGGSSLPSISLQGNISVRQQVQVPTSSSLKQHMR-PPQQYSGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQ 386
           N HI NPEAKPSLLPHPSLSDADFQ
Sbjct: 361 NAHIANPEAKPSLLPHPSLSDADFQ 383

[Close]

BLAST of CsaV3_6G004790 vs. NCBI nr
Match: XP_023550987.1 (cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 671.0 bits (1730), Expect = 6.2e-189
Identity = 346/385 (89.87%), Postives = 359/385 (93.25%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLV NAGGPT HGE+SQ QP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNAGGPTAHGESSQLQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQN LQS TMPNDPLTLHLAKLSRSQLTE MSGLK 
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEAMSGLKV 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQ PNL+Q +THPQLPLH+ QQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           Q SSLQIQPGLPPLAPNRMQTGFVPKKETQ SL PQNPLAPHQFSASQRP LQSQIQPS 
Sbjct: 241 QSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSLTPQNPLAPHQFSASQRPPLQSQIQPSL 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360
            LQG+LTGIPGGS LPS+SL G++S+RQQVQ P+S+SLKQHMRPP QQY GHGGA+IPGH
Sbjct: 301 ALQGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQ 386
           N  I NPEAKPSLLP PSL DADFQ
Sbjct: 361 NAQIANPEAKPSLLPRPSLPDADFQ 385

[Close]

BLAST of CsaV3_6G004790 vs. ExPASy Swiss-Prot
Match: Q9M9G6 (Cleavage stimulating factor 64 OS=Arabidopsis thaliana OX=3702 GN=CSTF64 PE=1 SV=1)

HSP 1 Score: 314.7 bits (805), Expect = 1.5e-84
Identity = 201/396 (50.76%), Postives = 248/396 (62.63%), Query Frame = 0


Query: 2   ASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
           +S+Q RCVFVGNIPYDATEEQL EIC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETA
Sbjct: 4   SSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETA 63

Query: 62  LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA---------GGPTPH 121
           LSARRNLQ YEINGRQLRVDFAENDKG D+ R+Q +GGPGL +           GGP   
Sbjct: 64  LSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQSQGGPGLPSTTTVTESQKQIGGPV-- 123

Query: 122 GEASQHQPIGLHIAITAAAVMAGALGGAQAAS--NQNNLQSATMPNDPLTLHLAKLSRSQ 181
            +++ HQP+GLH+A TAA+V+AGALGG Q  S   Q+NLQ     +DPL LHLAK+SRSQ
Sbjct: 124 -DSNMHQPVGLHLATTAASVIAGALGGPQVGSQFTQSNLQ--VPASDPLALHLAKMSRSQ 183

Query: 182 LTEVMSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHP 241
           LTE++S +K MATQNK+ ARQLL++RPQL KA+F +Q+MLG+V+PQVLQ PN+ Q+ +H 
Sbjct: 184 LTEIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQSPNIVQAPSH- 243

Query: 242 QLPLHESQQGQPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRP 301
                     Q + L  Q  LPPLA    Q                   APH    SQ P
Sbjct: 244 ----MTGSSIQDAQLSGQNLLPPLAQRSQQLS----------------RAPH----SQYP 303

Query: 302 SLQSQIQPSHTLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYL 361
             QS  QP   +   L   PG SS+       N   R QV+  ++   +Q +  P    +
Sbjct: 304 VQQSSKQPFSQIP-QLVAQPGPSSV-------NPPPRSQVKVENAPFQRQQV-VPASTNI 354

Query: 362 GHGGALIPGHNTHITNPEAKPSLLPHPSLSDADFQE 387
           G+           + N   +PS +PH +L ++  Q+
Sbjct: 364 GYSS------QNSVPNNAIQPSQVPHQALPNSVMQQ 354

[Close]

BLAST of CsaV3_6G004790 vs. ExPASy Swiss-Prot
Match: Q8BIQ5 (Cleavage stimulation factor subunit 2 OS=Mus musculus OX=10090 GN=Cstf2 PE=1 SV=2)

HSP 1 Score: 142.5 bits (358), Expect = 1.0e-32
Identity = 131/420 (31.19%), Postives = 184/420 (43.81%), Query Frame = 0


Query: 7   RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
           R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 67  NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQPIGLHIA 126
           NL G E +GR LRVD A ++K  +  +  G G P +       +P+GE+           
Sbjct: 76  NLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVI------ESPYGESI---------- 135

Query: 127 ITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKAMATQNK 186
                                   S     + ++  +A L   Q+ E+M  +K     + 
Sbjct: 136 ------------------------SPEDAPESISKAVASLPPEQMFELMKQMKLCVQNSP 195

Query: 187 DLARQLLLARPQLSKALFQSQIMLGMVTPQVLQK-------------------------- 246
             AR +LL  PQL+ AL Q+Q+++ +V P++  K                          
Sbjct: 196 QEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTNIPTLISGNPQPVHVAGPGS 255

Query: 247 -PNLQQSATHPQLPLHESQQGQ-----------------PSSLQIQ-----PGLPPLAPN 306
            PN+  +  +PQ P  +S  G                  P+ +Q+      PG   LAP 
Sbjct: 256 GPNVSMNQQNPQAPQAQSLGGMHVNGAPPMMQASMPGGVPAPVQMAAAVGGPGPGSLAPA 315

Query: 307 RM------QTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSHTLQGSLTGIPG 366
            +        G  P    +  +  Q+P A     A QR +L + +     L G     P 
Sbjct: 316 GVMQAQVGMQGAGPVPMERGQVPMQDPRA-----AMQRGALPTNVPTPRGLLGDAPNDPR 375

Query: 367 GSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGHNTHITNPEAKP 372
           G +L +++  G++  R  +  P       H  PP     GH G   P H+     P A+P
Sbjct: 376 GGTLMTVT--GDVEPRAYLGPPP----PPHQGPPMHHVPGHEGRGPPPHDMR-GGPLAEP 383

[Close]

BLAST of CsaV3_6G004790 vs. ExPASy Swiss-Prot
Match: Q8HXM1 (Cleavage stimulation factor subunit 2 OS=Bos taurus OX=9913 GN=CSTF2 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-32
Identity = 117/343 (34.11%), Postives = 160/343 (46.65%), Query Frame = 0


Query: 7   RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
           R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 67  NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQPIGLHIA 126
           NL G E +GR LRVD A ++K  +  +  G G P +       +P+GE            
Sbjct: 76  NLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVI------ESPYGETI---------- 135

Query: 127 ITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKAMATQNK 186
                                   S     + ++  +A L   Q+ E+M  +K     + 
Sbjct: 136 ------------------------SPEDAPESISKAVASLPPEQMFELMKQMKLCVQNSP 195

Query: 187 DLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQGQPSSL- 246
             AR +LL  PQL+ AL Q+Q+++ +V P++  K        H Q  +     G P ++ 
Sbjct: 196 QEARNMLLQNPQLAYALLQAQVVMRIVDPEIALK------ILHRQTNIPTLIAGNPQTVH 255

Query: 247 QIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSHTLQGS 306
              PG         Q    P+ +T S +      AP    A    SLQ+ +     +  +
Sbjct: 256 SAGPGSGSSVSMNQQNPQTPQAQTLSGMHVNG--APPLMQA----SLQAGVAAPGQIPAT 300

Query: 307 LTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQ 349
           +TG   GS  P+  +Q       QV  P S  +       P Q
Sbjct: 316 VTGPGPGSLAPAGGMQA------QVGMPGSGPVSMERGQVPMQ 300

[Close]

BLAST of CsaV3_6G004790 vs. ExPASy Swiss-Prot
Match: P33240 (Cleavage stimulation factor subunit 2 OS=Homo sapiens OX=9606 GN=CSTF2 PE=1 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-32
Identity = 133/422 (31.52%), Postives = 183/422 (43.36%), Query Frame = 0


Query: 7   RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
           R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 67  NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQPIGLHIA 126
           NL G E +GR LRVD A ++K  +  +  G G P +       +P+GE            
Sbjct: 76  NLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVI------ESPYGETI---------- 135

Query: 127 ITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKAMATQNK 186
                                   S     + ++  +A L   Q+ E+M  +K     + 
Sbjct: 136 ------------------------SPEDAPESISKAVASLPPEQMFELMKQMKLCVQNSP 195

Query: 187 DLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQS------ATHPQLPLHESQQG 246
             AR +LL  PQL+ AL Q+Q+++ +V P++  K   +Q+      A +PQ P+H +  G
Sbjct: 196 QEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTNIPTLIAGNPQ-PVHGAGPG 255

Query: 247 QPSSLQIQP-----------------GLPPLAPNRMQTGFVPKKETQSSLMPQNP--LAP 306
             S++ +                   G PPL    MQ G     +  +++    P  LAP
Sbjct: 256 SGSNVSMNQQNPQAPQAQSLGGMHVNGAPPLMQASMQGGVPAPGQMPAAVTGPGPGSLAP 315

Query: 307 --------------------------HQFSASQRPSLQSQIQPSHTLQGSLTGIPGGSSL 366
                                        +A QR SL + +     L G     P G +L
Sbjct: 316 GGGMQAQVGMPGSGPVSMERGQVPMQDPRAAMQRGSLPANVPTPRGLLGDAPNDPRGGTL 375

Query: 367 PSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGHNTHITNPEAKPSLLP 378
             +S+ G +  R  +  P       H  PP     GH     P H       E +   LP
Sbjct: 376 --LSVTGEVEPRGYLGPP-------HQGPPMHHVPGHESRGPPPH-------ELRGGPLP 380

[Close]

BLAST of CsaV3_6G004790 vs. ExPASy Swiss-Prot
Match: Q5RDA3 (Cleavage stimulation factor subunit 2 OS=Pongo abelii OX=9601 GN=CSTF2 PE=2 SV=1)

HSP 1 Score: 141.7 bits (356), Expect = 1.7e-32
Identity = 133/422 (31.52%), Postives = 183/422 (43.36%), Query Frame = 0


Query: 7   RCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARR 66
           R VFVGNIPY+ATEEQL +I  EVGPVVSFRLV DRETGKPKGYGFCEY+D+ETALSA R
Sbjct: 16  RSVFVGNIPYEATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMR 75

Query: 67  NLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQPIGLHIA 126
           NL G E +GR LRVD A ++K  +  +  G G P +       +P+GE            
Sbjct: 76  NLNGREFSGRALRVDNAASEKNKEELKSLGTGAPVI------ESPYGETI---------- 135

Query: 127 ITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKAMATQNK 186
                                   S     + ++  +A L   Q+ E+M  +K     + 
Sbjct: 136 ------------------------SPEDAPESISKAVASLPPEQMFELMKQMKLCVQNSP 195

Query: 187 DLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQS------ATHPQLPLHESQQG 246
             AR +LL  PQL+ AL Q+Q+++ +V P++  K   +Q+      A +PQ P+H +  G
Sbjct: 196 QEARNMLLQNPQLAYALLQAQVVMRIVDPEIALKILHRQTNIPTLIAGNPQ-PVHGAGPG 255

Query: 247 QPSSLQIQP-----------------GLPPLAPNRMQTGFVPKKETQSSLMPQNP--LAP 306
             S++ +                   G PPL    MQ G     +  +++    P  LAP
Sbjct: 256 SGSNVSMNQQNPQAPQAQSLGGMHVNGAPPLMQASMQGGVPAPGQIPAAVTGPGPGSLAP 315

Query: 307 --------------------------HQFSASQRPSLQSQIQPSHTLQGSLTGIPGGSSL 366
                                        +A QR SL + +     L G     P G +L
Sbjct: 316 GGGMQAQVGMPGSGPVSMERGQVPMQDPRAAMQRGSLPANVPTPRGLLGDAPNDPRGGTL 375

Query: 367 PSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGHNTHITNPEAKPSLLP 378
             +S+ G +  R  +  P       H  PP     GH     P H       E +   LP
Sbjct: 376 --LSVTGEVEPRGYLGPP-------HQGPPMHHVPGHESRGPPPH-------ELRGGPLP 380

[Close]

BLAST of CsaV3_6G004790 vs. ExPASy TrEMBL
Match: A0A0A0KCI7 (RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G052670 PE=4 SV=1)

HSP 1 Score: 748.4 bits (1931), Expect = 1.5e-212
Identity = 385/385 (100.00%), Postives = 385/385 (100.00%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH
Sbjct: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360
           TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH
Sbjct: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQ 386
           NTHITNPEAKPSLLPHPSLSDADFQ
Sbjct: 361 NTHITNPEAKPSLLPHPSLSDADFQ 385

[Close]

BLAST of CsaV3_6G004790 vs. ExPASy TrEMBL
Match: A0A5D3BZN4 (Cleavage stimulating factor 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold409G00590 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 8.7e-205
Identity = 369/385 (95.84%), Postives = 378/385 (98.18%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHG++SQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGDSSQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQN LQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNTLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHE QQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHEIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSS+QIQPGLPPLAPNRMQTGF+PKKETQ SL PQNPLAPHQFSAS RPSLQSQIQPSH
Sbjct: 241 QPSSVQIQPGLPPLAPNRMQTGFLPKKETQLSLTPQNPLAPHQFSASLRPSLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360
           TLQG+LTGIPGGSSLPSI+LQGNISIRQQVQAP+SSSLKQHMRPPPQQYLGHGGALIPGH
Sbjct: 301 TLQGALTGIPGGSSLPSINLQGNISIRQQVQAPTSSSLKQHMRPPPQQYLGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQ 386
           N HITNPEAKPSLLPHPS+SD DFQ
Sbjct: 361 NAHITNPEAKPSLLPHPSISDVDFQ 385

[Close]

BLAST of CsaV3_6G004790 vs. ExPASy TrEMBL
Match: A0A1S3C3F6 (cleavage stimulating factor 64 OS=Cucumis melo OX=3656 GN=LOC103496563 PE=4 SV=1)

HSP 1 Score: 722.6 bits (1864), Expect = 8.7e-205
Identity = 369/385 (95.84%), Postives = 378/385 (98.18%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHG++SQHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGDSSQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQN LQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNTLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHE QQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHEIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QPSS+QIQPGLPPLAPNRMQTGF+PKKETQ SL PQNPLAPHQFSAS RPSLQSQIQPSH
Sbjct: 241 QPSSVQIQPGLPPLAPNRMQTGFLPKKETQLSLTPQNPLAPHQFSASLRPSLQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360
           TLQG+LTGIPGGSSLPSI+LQGNISIRQQVQAP+SSSLKQHMRPPPQQYLGHGGALIPGH
Sbjct: 301 TLQGALTGIPGGSSLPSINLQGNISIRQQVQAPTSSSLKQHMRPPPQQYLGHGGALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQ 386
           N HITNPEAKPSLLPHPS+SD DFQ
Sbjct: 361 NAHITNPEAKPSLLPHPSISDVDFQ 385

[Close]

BLAST of CsaV3_6G004790 vs. ExPASy TrEMBL
Match: A0A6J1HJJ0 (cleavage stimulating factor 64 OS=Cucurbita moschata OX=3662 GN=LOC111464146 PE=4 SV=1)

HSP 1 Score: 668.7 bits (1724), Expect = 1.5e-188
Identity = 344/385 (89.35%), Postives = 359/385 (93.25%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLV NAGGPT HGE+SQ QP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVTNAGGPTAHGESSQLQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAAVMAGALGGAQAASNQN LQS TMPNDPLTLHLAKLSRSQLTEVMSGLK 
Sbjct: 121 IGLHIAITAAAVMAGALGGAQAASNQNILQSTTMPNDPLTLHLAKLSRSQLTEVMSGLKV 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQ PNL+Q +THPQLPLH+ QQG
Sbjct: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQNPNLRQPSTHPQLPLHDIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           Q SSLQIQPGLPPLAPNRMQTGFVPKKETQ S+ PQNPLAPHQFSASQRP LQSQIQP+ 
Sbjct: 241 QSSSLQIQPGLPPLAPNRMQTGFVPKKETQVSITPQNPLAPHQFSASQRPPLQSQIQPAL 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360
            L G+LTGIPGGS LPS+SL G++S+RQQVQ P+S+SLKQHMRPP QQY GHGGA+IPGH
Sbjct: 301 ALHGTLTGIPGGSLLPSVSLPGSMSVRQQVQVPTSASLKQHMRPPSQQYSGHGGAVIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQ 386
           N  I NPEAKPSLLP PSL DADFQ
Sbjct: 361 NAQIANPEAKPSLLPRPSLPDADFQ 385

[Close]

BLAST of CsaV3_6G004790 vs. ExPASy TrEMBL
Match: A0A6J1JW71 (cleavage stimulating factor 64-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111489426 PE=4 SV=1)

HSP 1 Score: 663.3 bits (1710), Expect = 6.3e-187
Identity = 342/385 (88.83%), Postives = 355/385 (92.21%), Query Frame = 0


Query: 1   MASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60
           MAS+QHRCVFVGNIPYDATEEQLIEICQE GPVVSFRLVIDRETGKPKGYGFCEYKDEET
Sbjct: 1   MASSQHRCVFVGNIPYDATEEQLIEICQEAGPVVSFRLVIDRETGKPKGYGFCEYKDEET 60

Query: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGGPTPHGEASQHQP 120
           ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQG GGPGLVAN+GGPT  GE+ QHQP
Sbjct: 61  ALSARRNLQGYEINGRQLRVDFAENDKGADRNREQGHGGPGLVANSGGPTALGESGQHQP 120

Query: 121 IGLHIAITAAAVMAGALGGAQAASNQNNLQSATMPNDPLTLHLAKLSRSQLTEVMSGLKA 180
           IGLHIAITAAA+MAGALGGAQAASNQN LQ+AT+ NDPLTLHLAKLSRSQLTEVMSGLK 
Sbjct: 121 IGLHIAITAAAIMAGALGGAQAASNQNILQNATISNDPLTLHLAKLSRSQLTEVMSGLKV 180

Query: 181 MATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHPQLPLHESQQG 240
           MATQNKDLA QLLLARPQLSKALFQSQIMLGMVTPQVLQKPNL+Q +THPQLP HE QQG
Sbjct: 181 MATQNKDLAHQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLRQPSTHPQLPSHEIQQG 240

Query: 241 QPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRPSLQSQIQPSH 300
           QP SLQIQ GLPPLAPNRMQTGFVPKKETQ SL PQNP APHQ SASQ P  QSQIQPSH
Sbjct: 241 QPPSLQIQQGLPPLAPNRMQTGFVPKKETQMSLTPQNPSAPHQSSASQWPPFQSQIQPSH 300

Query: 301 TLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYLGHGGALIPGH 360
            LQG+LTGIPGGSSLPSISLQGNIS+RQQ+Q P SSSLKQH+ PP QQY GHG ALIPGH
Sbjct: 301 VLQGTLTGIPGGSSLPSISLQGNISVRQQIQVPISSSLKQHIHPPSQQYSGHGQALIPGH 360

Query: 361 NTHITNPEAKPSLLPHPSLSDADFQ 386
           N HI +PEAKPSLLPHPSLSDADFQ
Sbjct: 361 NAHIADPEAKPSLLPHPSLSDADFQ 385

[Close]

BLAST of CsaV3_6G004790 vs. TAIR 10
Match: AT1G71800.1 (cleavage stimulating factor 64 )

HSP 1 Score: 314.7 bits (805), Expect = 1.1e-85
Identity = 201/396 (50.76%), Postives = 248/396 (62.63%), Query Frame = 0


Query: 2   ASTQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETA 61
           +S+Q RCVFVGNIPYDATEEQL EIC EVGPVVSFRLV DRETGKPKGYGFCEYKDEETA
Sbjct: 4   SSSQRRCVFVGNIPYDATEEQLREICGEVGPVVSFRLVTDRETGKPKGYGFCEYKDEETA 63

Query: 62  LSARRNLQGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANA---------GGPTPH 121
           LSARRNLQ YEINGRQLRVDFAENDKG D+ R+Q +GGPGL +           GGP   
Sbjct: 64  LSARRNLQSYEINGRQLRVDFAENDKGTDKTRDQSQGGPGLPSTTTVTESQKQIGGPV-- 123

Query: 122 GEASQHQPIGLHIAITAAAVMAGALGGAQAAS--NQNNLQSATMPNDPLTLHLAKLSRSQ 181
            +++ HQP+GLH+A TAA+V+AGALGG Q  S   Q+NLQ     +DPL LHLAK+SRSQ
Sbjct: 124 -DSNMHQPVGLHLATTAASVIAGALGGPQVGSQFTQSNLQ--VPASDPLALHLAKMSRSQ 183

Query: 182 LTEVMSGLKAMATQNKDLARQLLLARPQLSKALFQSQIMLGMVTPQVLQKPNLQQSATHP 241
           LTE++S +K MATQNK+ ARQLL++RPQL KA+F +Q+MLG+V+PQVLQ PN+ Q+ +H 
Sbjct: 184 LTEIISSIKLMATQNKEHARQLLVSRPQLLKAVFLAQVMLGIVSPQVLQSPNIVQAPSH- 243

Query: 242 QLPLHESQQGQPSSLQIQPGLPPLAPNRMQTGFVPKKETQSSLMPQNPLAPHQFSASQRP 301
                     Q + L  Q  LPPLA    Q                   APH    SQ P
Sbjct: 244 ----MTGSSIQDAQLSGQNLLPPLAQRSQQLS----------------RAPH----SQYP 303

Query: 302 SLQSQIQPSHTLQGSLTGIPGGSSLPSISLQGNISIRQQVQAPSSSSLKQHMRPPPQQYL 361
             QS  QP   +   L   PG SS+       N   R QV+  ++   +Q +  P    +
Sbjct: 304 VQQSSKQPFSQIP-QLVAQPGPSSV-------NPPPRSQVKVENAPFQRQQV-VPASTNI 354

Query: 362 GHGGALIPGHNTHITNPEAKPSLLPHPSLSDADFQE 387
           G+           + N   +PS +PH +L ++  Q+
Sbjct: 364 GYSS------QNSVPNNAIQPSQVPHQALPNSVMQQ 354

[Close]

BLAST of CsaV3_6G004790 vs. TAIR 10
Match: AT1G60000.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 68.9 bits (167), Expect = 1.0e-11
Identity = 33/84 (39.29%), Postives = 51/84 (60.71%), Query Frame = 0


Query: 4   TQHRCVFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALS 63
           T+H+ +FVGN+ +  T E L    +E G VV  R+V D +TG+ +GYGF  Y  +    +
Sbjct: 175 TEHK-LFVGNLSWTVTSESLAGAFRECGDVVGARVVFDGDTGRSRGYGFVCYSSKAEMET 234

Query: 64  ARRNLQGYEINGRQLRVDFAENDK 88
           A  +L G+E+ GR +RV+ A+  K
Sbjct: 235 ALESLDGFELEGRAIRVNLAQGKK 257

[Close]

BLAST of CsaV3_6G004790 vs. TAIR 10
Match: AT5G61030.1 (glycine-rich RNA-binding protein 3 )

HSP 1 Score: 68.6 bits (166), Expect = 1.3e-11
Identity = 36/100 (36.00%), Postives = 56/100 (56.00%), Query Frame = 0


Query: 9   VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
           +F+G + Y   E+ L E   + G VV  R+++DRETG+ +G+GF  +   E A SA + L
Sbjct: 42  LFIGGMAYSMDEDSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQAL 101

Query: 69  QGYEINGRQLRVDFAENDKGADRNREQGRGGPGLVANAGG 109
            G +++GR ++V++A      DR    G GG G     GG
Sbjct: 102 DGRDLHGRVVKVNYAN-----DRTSGGGFGGGGYGGGGGG 136

[Close]

BLAST of CsaV3_6G004790 vs. TAIR 10
Match: AT3G47120.1 (RNA recognition motif (RRM)-containing protein )

HSP 1 Score: 67.0 bits (162), Expect = 3.8e-11
Identity = 33/98 (33.67%), Postives = 56/98 (57.14%), Query Frame = 0


Query: 9   VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
           V+VG IP+D TE  L+ +  + G +V   L+ D+ TGK KG+ F  Y+D+ + + A  NL
Sbjct: 38  VYVGGIPFDLTEGDLLAVFSQYGEIVDVNLIRDKGTGKSKGFAFLAYEDQRSTILAVDNL 97

Query: 69  QGYEINGRQLRVD----FAENDKGADRNREQGRGGPGL 103
            G  + GR ++VD    + ++++  +  R Q R   G+
Sbjct: 98  NGALVLGRTIKVDHCGAYKKHEEEDEETRRQNREARGV 135

[Close]

BLAST of CsaV3_6G004790 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 66.6 bits (161), Expect = 5.0e-11
Identity = 28/76 (36.84%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 9   VFVGNIPYDATEEQLIEICQEVGPVVSFRLVIDRETGKPKGYGFCEYKDEETALSARRNL 68
           VF+G +P D  EE L ++C+E+G +   RL+ DR++G  KGY F  +K ++ A  A   L
Sbjct: 118 VFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKAIEEL 177

Query: 69  QGYEINGRQLRVDFAE 85
              E  G+ +R   +E
Sbjct: 178 HSKEFKGKTIRCSLSE 193

The following BLAST results are available for this feature:

BLAST of CsaV3_6G004790 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8646656.1	1.7e-215	100.00	hypothetical protein Csa_005552 [Cucumis sativus]	[more]
XP_004141001.1	3.1e-212	100.00	cleavage stimulating factor 64 [Cucumis sativus]	[more]
XP_008456694.1	1.8e-204	95.84	PREDICTED: cleavage stimulating factor 64 [Cucumis melo] >KAA0031656.1 cleavage ...	[more]
XP_038885247.1	3.4e-195	93.51	LOW QUALITY PROTEIN: cleavage stimulating factor 64 [Benincasa hispida]	[more]
XP_023550987.1	6.2e-189	89.87	cleavage stimulating factor 64 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_6G004790 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M9G6	1.5e-84	50.76	Cleavage stimulating factor 64 OS=Arabidopsis thaliana OX=3702 GN=CSTF64 PE=1 SV...	[more]
Q8BIQ5	1.0e-32	31.19	Cleavage stimulation factor subunit 2 OS=Mus musculus OX=10090 GN=Cstf2 PE=1 SV=...	[more]
Q8HXM1	1.7e-32	34.11	Cleavage stimulation factor subunit 2 OS=Bos taurus OX=9913 GN=CSTF2 PE=2 SV=1	[more]
P33240	1.7e-32	31.52	Cleavage stimulation factor subunit 2 OS=Homo sapiens OX=9606 GN=CSTF2 PE=1 SV=1	[more]
Q5RDA3	1.7e-32	31.52	Cleavage stimulation factor subunit 2 OS=Pongo abelii OX=9601 GN=CSTF2 PE=2 SV=1	[more]

BLAST of CsaV3_6G004790 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCI7	1.5e-212	100.00	RRM domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G052670 PE=4 SV...	[more]
A0A5D3BZN4	8.7e-205	95.84	Cleavage stimulating factor 64 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3C3F6	8.7e-205	95.84	cleavage stimulating factor 64 OS=Cucumis melo OX=3656 GN=LOC103496563 PE=4 SV=1	[more]
A0A6J1HJJ0	1.5e-188	89.35	cleavage stimulating factor 64 OS=Cucurbita moschata OX=3662 GN=LOC111464146 PE=...	[more]
A0A6J1JW71	6.3e-187	88.83	cleavage stimulating factor 64-like isoform X3 OS=Cucurbita maxima OX=3661 GN=LO...	[more]

BLAST of CsaV3_6G004790 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G71800.1	1.1e-85	50.76	cleavage stimulating factor 64	[more]
AT1G60000.1	1.0e-11	39.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G61030.1	1.3e-11	36.00	glycine-rich RNA-binding protein 3	[more]
AT3G47120.1	3.8e-11	33.67	RNA recognition motif (RRM)-containing protein	[more]
AT4G00830.1	5.0e-11	36.84	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 8..81 e-value: 5.8E-28 score: 108.9
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 9..79 e-value: 2.7E-22 score: 78.4
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 7..85 score: 19.228996
IPR025742	Cleavage stimulation factor subunit 2, hinge domain	PFAM	PF14327	CSTF2_hinge	coord: 153..220 e-value: 3.5E-15 score: 56.2
None	No IPR available	GENE3D	1.25.40.630		coord: 147..221 e-value: 3.9E-8 score: 35.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 82..118
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 263..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..343
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 328..382
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..314
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 221..250
None	No IPR available	PANTHER	PTHR45735	CLEAVAGE STIMULATION FACTOR SUBUNIT 2	coord: 2..384
None	No IPR available	CDD	cd12671	RRM_CSTF2_CSTF2T	coord: 9..83 e-value: 8.87963E-53 score: 168.051
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 1..117 e-value: 1.8E-31 score: 111.1
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..107

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_6G004790.1	CsaV3_6G004790.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding