CsaV3_5G013600 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTCCCTATAATAAGACCCTTTAGACTAAAATTGATTTTCTCTTTTATACGCCCACCCACCACCCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCATTTTCAAATCTCTTTTCCCTTTTGGCTGCCATGGGAAACACCTTTGGTGTCAAGAAGACGGTTAAGGTTATGAAGATCTCGGGGGAGACCATGAAACTAAAAACCCCGGTTCAAGCTGGTGATGTCGTCAAGGATTATCCTGGCTTCGTTCTACTCGAATCTGAGGCTGTTAAACACTACGGGGTTCGAGCAAAGCCTTTGGAGCTCCACCAGAAGCTCAGCACTAAGAGACTTTATTTCCTCGTCGATCTTCCTAGACTTCCAAAAGAACAGGTGTGAGCTCCTTCCACTAATTTCAGTCTCCCCTTCATGGCTATTTGGTTTTTATTTCTTGGTTTTTTAAAATCAAGCCTATCAGCTCCAATTTTATCTTTTTATTCATATTCATTATACTCATTCTTTTATTCCGCTCGAGCATTAGCGAGAGACCAAACAAATAGATTTGTTAGGAACATCATATATAAAGTAGTTAAATTTTTCCCTTTGGATATCATGTTAAGTTTAATGTTTATAATAGTAATGCCTTCCGTATAATACTAAATAGGCTCCACGACGAGTACGGTCAGCGATCAACATGAGTGCAAAGGATAGGTTAGAGAGCTTGATGTTGGCACGACGATCAGCATCGGACCTAACTATCATGAAACCAAAGAGCATGTTGACGGAGGAGGGCGGTGGAGAGAGTGAGGAGGGATCGGTATCGGGAGCGCCAACACGGGTGAAGATGCGGTTGCCGAAGGCCGAAGTGGAAAGACTGTTGAAGGAGTGCAAAGATGAGGCAGAGGCAGCAGAAAGGATTATGGGATTGTACAAAACAAGAGAAAATGCTTATGAAAATGATCATAAGGAGAAGGAGATCAAGAAGGATATCATCAAGCCACGTGAGGTGCGTATACCTTCTTCTTCTTCTTCTTTTTCTTTACATCTTTTAATTATTGCAATAAGTTAATATATTCATAAAATTTATAAGTCTATTTTGATGTCTAAAACTTTCCAGAAAATAGAAGATCTTTCAAATTTTTGACTTACAAGAAAGAAAGTACATATATTAATTTCAATAATTTTGTTTATACTTTGATGAAATGTTCTTAAAAGTAGAAAAGAAATAATTAAAATAAAGAACCCTTATCCATTATGCCAATGTAACCAATGCAACAAAATATTATAGATTTCTCGTTTGCTTTTGGAATATAATCATTAAAAATAGTGGAAAAGAAGACTAAAATATTAAAAAGGTCAAAATATAAGATGGAGGGTAAAAAAATTCATGTATGGCAATTCTATTAAATAGTAATAATTCTTTTAATTAATTTAACACATACCATTATATTAAAATGAAAACAAAAATGTTTGAGATTAAACTATACTCACATCCATATTGATTTTTAAATGTTATTAATATTTAATTGGAGATTTTGGTTCTCAAGTTGTTGCACTCTTTTTCTTTCTTTTTTCTTCTTCTTTTTTTTTTTTTTAAAAAAAAAGAGTTGGTGCAATTATAAATTAATTAAATTAAAGATGTAAATTAAAATAGAGGAAGTTGACTCACTCACCATCCAATGAGTCAATTTTTGTTTGATTTTGTGCTTCCTACAATTTTCTATTATTATTATTTTTATTTTTTTAAAAAGTTAAAAGCGAAAAATTATTAGATATAAGTTTATCTTACTATTTAACTAAAAACCTTAATAATTAAAGCTATTTATGAGCAATTTAAATAATGCAATTATACTAATTACTACACCTGAAACATACTTAATAATATAGAGACCAACTTATGTAAATCTAAAGCTTAAGATAGCTGTTTGGTAATTAAGTATATTTTGAAATATATATATATATATATATATATATATAACATGATTAGGTATATTAGAGTTCGGTAAGTTTTTCTAAGAAATCTACCAAATTGGTTATTATATTTTTAAGAACATGATTACTAAAAAAGATATTTTAAAAGTTATAGGAATTGGGAACTAATGAATTTGTTTATTGATCATAAAAGTATTAAAATCTACACAAGATTATGGTAATGATTTCATTTACGAAATTTAATGGAATTTGGACACCAAGTTGACTCTCACTATCGAATTTGTCAATTTTTGTGTGTTAATTAGTGCTTCATCTTCTAACCCATTAATCACAATCTTTTCTTAGTGTACCCATCGTTCATTGATTACATCTCTTTAATTACCTTCAAATTGTTGATATTTCAACTTTCATATGATTCTTGTTTTTCAAAATAAATAAATTATTATGGTTAATTCATATTCTGTCTTTTCTTTTCCTTTATGTCATCAACTGTAGTTTTTGTTTGATTCTTATATATATTTCTAAATTTTACTGCTTTTACTTATGAATTTTCAACTTAATTGAGCTTTCCTCTCATCATAGTTTTTAAGATTTTACAGCTTTCTTGGTGAGACTTTTTTTTTACTTTGTATTTCTATCCACCATTAGTTTAAAAGAGTTAAATTAATTATAAATCAAATTAGTTTCCATTGTTTTAATTCACAGTTGATTGAAAGTTAGTACTCGAGATCAATAGTAGGAACCTAGGGTATTAGTAAAAATCTAGAGAAAAAAAGTATTGAATCTTGAAACATGAGAACAAAATTCAAAATTTTAAAAATAAAAATAAATCGTTTAAAATTTATGGACCAGAAATAAAACTAACAACTAAACAAAATGTTGAAATCTAGAAAAGAAGAACAAATTCAAAATTATAAACTCAAGAATAAAAATAAAAGTAAAATGAGACTATTCAAACAAAAGAAAAATATAAGAGTTCAAAAGTATGAAAATCAAAAGAAAACTATACTCAAATTTAATTAAAACATATTTTTCTCAAATAGTTTCGTTAAAGAAAATCACCCATTAGTTTCTAGTAATTTAGTTCTCTCCCAATTGTTTCTGATAATCATTAATTAACTATATATTAAAATTCCAATTAACCCCATAGCATTAGTTACAATATTTTCTTATTATATAGGGTGAAGCCATCATTGCCTCCATCTCTTTCATATAGACTTTTCTACTCACAAACCATTGATATCATATAATTATTAAAGATATATACATTAAGATCAGATGTGATACTTTTTTTTTTTTTTTTTGTGAGTTATCAACAAAGTTGTAGGGTGGGGATCCACTTTAAACCTAAAAAGTGCTCTTAATAAATTAATCTTCAAATTTAGTTCTATATCTCAAATATATCAAGAATCTATATGTAATCAATTAATAAGAATATTGGTTAAATAGAGAGGATGCAAAATTGACTATCATCATCTCTAGTCAATTTTTGCTTTATTATTGCTTTATTTGCCAAACCCATTTCCCCAGTTCAATCTTATCATAATGTGGCCATTTTAATTCTATATCTTTTGCTTAAATTATTAGGGGGACTTTTTCTCTTTTAATCTCTAAGAAAGAATGGTTTGAAATAATGCAGAAACGACGTGTAAGTTTCATGACGACAATGGAAGGTGGAACTCAAATTGCAGTAGCATCTTAATATATATATTAACCAAGAAAACAAAATGACAAGATTCATAAATAAATTAAGTAAAGTGATACAGTGACGATCTTCCCATGGCTACCAGATTACGTCCTTCACTTCAACTTAATATATTTCAATATCTTGGACATCCTTTTGTAGAATATTTACTTACATTTCATTTACTGCCTTCCCCTATATGTACACCCAAATGTACTTAATTACGATATCCATCAACTTCTTCTTCATCATCATCACACACACACACACATATATATAGCTTTCTTCCTTTAAATATTCTGAAGAACGACTGCTCGATCTTTTATGGCTCAATATATAGTTTTAACTTTTTATGCCCCTACCATTTGTTTCCATTTCATTGATATTCTATTAAGTTGTAACTTCA ATGGGAAACACCTTTGGTGTCAAGAAGACGGTTAAGGTTATGAAGATCTCGGGGGAGACCATGAAACTAAAAACCCCGGTTCAAGCTGGTGATGTCGTCAAGGATTATCCTGGCTTCGTTCTACTCGAATCTGAGGCTGTTAAACACTACGGGGTTCGAGCAAAGCCTTTGGAGCTCCACCAGAAGCTCAGCACTAAGAGACTTTATTTCCTCGTCGATCTTCCTAGACTTCCAAAAGAACAGGCTCCACGACGAGTACGGTCAGCGATCAACATGAGTGCAAAGGATAGGTTAGAGAGCTTGATGTTGGCACGACGATCAGCATCGGACCTAACTATCATGAAACCAAAGAGCATGTTGACGGAGGAGGGCGGTGGAGAGAGTGAGGAGGGATCGGTATCGGGAGCGCCAACACGGGTGAAGATGCGGTTGCCGAAGGCCGAAGTGGAAAGACTGTTGAAGGAGTGCAAAGATGAGGCAGAGGCAGCAGAAAGGATTATGGGATTGTACAAAACAAGAGAAAATGCTTATGAAAATGATCATAAGGAGAAGGAGATCAAGAAGGATATCATCAAGCCACGTGAGAAACGACGTGTAAGTTTCATGACGACAATGGAAGGTGGAACTCAAATTGCAGTAGCATCTTAA ATGGGAAACACCTTTGGTGTCAAGAAGACGGTTAAGGTTATGAAGATCTCGGGGGAGACCATGAAACTAAAAACCCCGGTTCAAGCTGGTGATGTCGTCAAGGATTATCCTGGCTTCGTTCTACTCGAATCTGAGGCTGTTAAACACTACGGGGTTCGAGCAAAGCCTTTGGAGCTCCACCAGAAGCTCAGCACTAAGAGACTTTATTTCCTCGTCGATCTTCCTAGACTTCCAAAAGAACAGGCTCCACGACGAGTACGGTCAGCGATCAACATGAGTGCAAAGGATAGGTTAGAGAGCTTGATGTTGGCACGACGATCAGCATCGGACCTAACTATCATGAAACCAAAGAGCATGTTGACGGAGGAGGGCGGTGGAGAGAGTGAGGAGGGATCGGTATCGGGAGCGCCAACACGGGTGAAGATGCGGTTGCCGAAGGCCGAAGTGGAAAGACTGTTGAAGGAGTGCAAAGATGAGGCAGAGGCAGCAGAAAGGATTATGGGATTGTACAAAACAAGAGAAAATGCTTATGAAAATGATCATAAGGAGAAGGAGATCAAGAAGGATATCATCAAGCCACGTGAGAAACGACGTGTAAGTTTCATGACGACAATGGAAGGTGGAACTCAAATTGCAGTAGCATCTTAA MGNTFGVKKTVKVMKISGETMKLKTPVQAGDVVKDYPGFVLLESEAVKHYGVRAKPLELHQKLSTKRLYFLVDLPRLPKEQAPRRVRSAINMSAKDRLESLMLARRSASDLTIMKPKSMLTEEGGGESEEGSVSGAPTRVKMRLPKAEVERLLKECKDEAEAAERIMGLYKTRENAYENDHKEKEIKKDIIKPREKRRVSFMTTMEGGTQIAVAS* Homology
BLAST of CsaV3_5G013600 vs. NCBI nr
Match: XP_004140437.1 (uncharacterized protein At1g66480 [Cucumis sativus] >KGN50757.2 hypothetical protein Csa_021521 [Cucumis sativus]) HSP 1 Score: 409.1 bits (1050), Expect = 2.4e-110 Identity = 215/215 (100.00%), Postives = 215/215 (100.00%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. NCBI nr
Match: XP_008454773.1 (PREDICTED: uncharacterized protein At1g66480 isoform X2 [Cucumis melo]) HSP 1 Score: 368.2 bits (944), Expect = 4.7e-98 Identity = 201/215 (93.49%), Postives = 206/215 (95.81%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. NCBI nr
Match: XP_008454771.1 (PREDICTED: uncharacterized protein At1g66480 isoform X1 [Cucumis melo]) HSP 1 Score: 363.6 bits (932), Expect = 1.2e-96 Identity = 201/216 (93.06%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. NCBI nr
Match: XP_038891934.1 (uncharacterized protein At1g66480 [Benincasa hispida]) HSP 1 Score: 358.6 bits (919), Expect = 3.8e-95 Identity = 196/217 (90.32%), Postives = 204/217 (94.01%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. NCBI nr
Match: XP_022942789.1 (uncharacterized protein At1g66480 isoform X2 [Cucurbita moschata]) HSP 1 Score: 307.8 bits (787), Expect = 7.6e-80 Identity = 171/217 (78.80%), Postives = 190/217 (87.56%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. ExPASy Swiss-Prot
Match: Q6NLC8 (Uncharacterized protein At1g66480 OS=Arabidopsis thaliana OX=3702 GN=At1g66480 PE=2 SV=1) HSP 1 Score: 150.6 bits (379), Expect = 2.0e-35 Identity = 99/228 (43.42%), Postives = 141/228 (61.84%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. ExPASy TrEMBL
Match: A0A1S3C0K8 (uncharacterized protein At1g66480 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103495093 PE=4 SV=1) HSP 1 Score: 368.2 bits (944), Expect = 2.3e-98 Identity = 201/215 (93.49%), Postives = 206/215 (95.81%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. ExPASy TrEMBL
Match: A0A1S3BZC7 (uncharacterized protein At1g66480 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103495093 PE=4 SV=1) HSP 1 Score: 363.6 bits (932), Expect = 5.7e-97 Identity = 201/216 (93.06%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. ExPASy TrEMBL
Match: A0A6J1FSC9 (uncharacterized protein At1g66480 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111447718 PE=4 SV=1) HSP 1 Score: 307.8 bits (787), Expect = 3.7e-80 Identity = 171/217 (78.80%), Postives = 190/217 (87.56%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. ExPASy TrEMBL
Match: A0A6J1DRH0 (uncharacterized protein At1g66480 OS=Momordica charantia OX=3673 GN=LOC111022499 PE=4 SV=1) HSP 1 Score: 302.8 bits (774), Expect = 1.2e-78 Identity = 168/220 (76.36%), Postives = 188/220 (85.45%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. ExPASy TrEMBL
Match: A0A6J1FVP5 (uncharacterized protein At1g66480 isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111447718 PE=4 SV=1) HSP 1 Score: 302.4 bits (773), Expect = 1.5e-78 Identity = 171/220 (77.73%), Postives = 190/220 (86.36%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. TAIR 10
Match: AT2G01340.1 (Encodes a protein whose expression is responsive to nematode infection. ) HSP 1 Score: 191.8 bits (486), Expect = 5.7e-49 Identity = 121/227 (53.30%), Postives = 154/227 (67.84%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. TAIR 10
Match: AT1G71015.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01340.1); Has 85 Blast hits to 85 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 85; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 171.8 bits (434), Expect = 6.1e-43 Identity = 94/169 (55.62%), Postives = 125/169 (73.96%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. TAIR 10
Match: AT1G66480.1 (plastid movement impaired 2 ) HSP 1 Score: 150.6 bits (379), Expect = 1.4e-36 Identity = 99/228 (43.42%), Postives = 141/228 (61.84%), Query Frame = 0
BLAST of CsaV3_5G013600 vs. TAIR 10
Match: AT5G37840.1 (BEST Arabidopsis thaliana protein match is: plastid movement impaired 2 (TAIR:AT1G66480.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 128.6 bits (322), Expect = 5.9e-30 Identity = 82/178 (46.07%), Postives = 109/178 (61.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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