CsaV3_5G010930 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGTATCGAGCATCGTCGACCGTTTACAACAAGTTTTCAAATGCTCATAGATACGATGGCGTCTTTACTGCTCCGTTGAAGCACGAAGCTCCGTCCTTCTCTACTCGAGTTGAGGGTTACAGAAAGATTTTTCGTGGTTCGCCAGTTTCTTCTATTATGATTCTCAATGTTCCAACACTGAGCTATAAGAAGTTTCAGACACTGTGCGTAAGGGTTTGAGGGCCTCTTCCATTTTTTTTTTCTACTTTTACTATATATATATATATAACTCTAAACAATAAATC ATGGAGTATCGAGCATCGTCGACCGTTTACAACAAGTTTTCAAATGCTCATAGATACGATGGCGTCTTTACTGCTCCGTTGAAGCACGAAGCTCCGTCCTTCTCTACTCGAGTTGAGGGTTACAGAAAGATTTTTCGTGGTTCGCCAGTTTCTTCTATTATGATTCTCAATGTTCCAACACTGAGCTATAAGAAGTTTCAGACACTGTGCGTAAGGGTTTGA ATGGAGTATCGAGCATCGTCGACCGTTTACAACAAGTTTTCAAATGCTCATAGATACGATGGCGTCTTTACTGCTCCGTTGAAGCACGAAGCTCCGTCCTTCTCTACTCGAGTTGAGGGTTACAGAAAGATTTTTCGTGGTTCGCCAGTTTCTTCTATTATGATTCTCAATGTTCCAACACTGAGCTATAAGAAGTTTCAGACACTGTGCGTAAGGGTTTGA MEYRASSTVYNKFSNAHRYDGVFTAPLKHEAPSFSTRVEGYRKIFRGSPVSSIMILNVPTLSYKKFQTLCVRV* Homology
BLAST of CsaV3_5G010930 vs. NCBI nr
Match: KGN50735.1 (hypothetical protein Csa_005817 [Cucumis sativus]) HSP 1 Score: 151.0 bits (380), Expect = 4.1e-33 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of CsaV3_5G010930 vs. NCBI nr
Match: XP_008466544.1 (PREDICTED: auxilin-like protein 1 [Cucumis melo] >ADN34187.1 auxilin-like protein [Cucumis melo subsp. melo] >KAA0041573.1 auxilin-like protein 1 [Cucumis melo var. makuwa] >TYK19683.1 auxilin-like protein 1 [Cucumis melo var. makuwa]) HSP 1 Score: 92.8 bits (229), Expect = 1.3e-15 Identity = 51/72 (70.83%), Postives = 53/72 (73.61%), Query Frame = 0
BLAST of CsaV3_5G010930 vs. NCBI nr
Match: XP_031738765.1 (auxilin-like protein 1 [Cucumis sativus] >KGN59981.1 hypothetical protein Csa_001686 [Cucumis sativus]) HSP 1 Score: 92.0 bits (227), Expect = 2.2e-15 Identity = 50/72 (69.44%), Postives = 53/72 (73.61%), Query Frame = 0
BLAST of CsaV3_5G010930 vs. NCBI nr
Match: XP_038897761.1 (auxilin-like protein 1 [Benincasa hispida]) HSP 1 Score: 89.0 bits (219), Expect = 1.9e-14 Identity = 48/72 (66.67%), Postives = 51/72 (70.83%), Query Frame = 0
BLAST of CsaV3_5G010930 vs. NCBI nr
Match: XP_022132309.1 (auxilin-like protein 1 isoform X2 [Momordica charantia]) HSP 1 Score: 88.6 bits (218), Expect = 2.5e-14 Identity = 49/71 (69.01%), Postives = 51/71 (71.83%), Query Frame = 0
BLAST of CsaV3_5G010930 vs. ExPASy TrEMBL
Match: A0A0A0KM50 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G222085 PE=4 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 2.0e-33 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 0
BLAST of CsaV3_5G010930 vs. ExPASy TrEMBL
Match: A0A5A7TEJ5 (Auxilin-like protein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold242G00790 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 6.4e-16 Identity = 51/72 (70.83%), Postives = 53/72 (73.61%), Query Frame = 0
BLAST of CsaV3_5G010930 vs. ExPASy TrEMBL
Match: E5GCI8 (Auxilin-like protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 6.4e-16 Identity = 51/72 (70.83%), Postives = 53/72 (73.61%), Query Frame = 0
BLAST of CsaV3_5G010930 vs. ExPASy TrEMBL
Match: A0A1S3CRM9 (auxilin-like protein 1 OS=Cucumis melo OX=3656 GN=LOC103503929 PE=4 SV=1) HSP 1 Score: 92.8 bits (229), Expect = 6.4e-16 Identity = 51/72 (70.83%), Postives = 53/72 (73.61%), Query Frame = 0
BLAST of CsaV3_5G010930 vs. ExPASy TrEMBL
Match: A0A0A0LIZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G859680 PE=4 SV=1) HSP 1 Score: 92.0 bits (227), Expect = 1.1e-15 Identity = 50/72 (69.44%), Postives = 53/72 (73.61%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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