CsaV3_5G007960 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_5G007960
Typegene
OrganismCucumis sativus L. var. sativus cv. Chinese Long (Cucumber (Chinese Long) v3)
DescriptionUnknown protein
Locationchr5: 4691071 .. 4691250 (-)
RNA-Seq ExpressionCsaV3_5G007960
SyntenyCsaV3_5G007960
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATATGGGATATTTTGTGGAGGGATAGGCAGAAGAGGAGTTGCCAGAAAGACTGTTCAACGCTGTCTGGAGTTACCAATTGGAGATGTTTTGGCGATTGCCGTAGAGGCACCGACATTGGCACGTGGAGTATCATGTACAAAGGTGAATCACCACAAACTTGGCAATGAAGACGATAACTG

mRNA sequence

ATATGGGATATTTTGTGGAGGGATAGGCAGAAGAGGAGTTGCCAGAAAGACTGTTCAACGCTGTCTGGAGTTACCAATTGGAGATGTTTTGGCGATTGCCGTAGAGGCACCGACATTGGCACGTGGAGTATCATGTACAAAGGTGAATCACCACAAACTTGGCAATGA

Coding sequence (CDS)

ATATGGGATATTTTGTGGAGGGATAGGCAGAAGAGGAGTTGCCAGAAAGACTGTTCAACGCTGTCTGGAGTTACCAATTGGAGATGTTTTGGCGATTGCCGTAGAGGCACCGACATTGGCACGTGGAGTATCATGTACAAAGGTGAATCACCACAAACTTGGCAATGA

Protein sequence

IWDILWRDRQKRSCQKDCSTLSGVTNWRCFGDCRRGTDIGTWSIMYKGESPQTWQ*
Homology
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BLAST of CsaV3_5G007960 vs. NCBI nr
Match: KAE8647985.1 (hypothetical protein Csa_023962, partial [Cucumis sativus])

HSP 1 Score: 132.1 bits (331), Expect = 1.5e-27
Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0 

Query: 1  IWDILWRDRQKRSCQKDCSTLSGVTNWRCFGDCRRGTDIGTWSIMYKGESPQTWQ 56
          IWDILWRDRQKRSCQKDCSTLSGVTNWRCFGDCRRGTDIGTWSIMYKGESPQTWQ
Sbjct: 1  IWDILWRDRQKRSCQKDCSTLSGVTNWRCFGDCRRGTDIGTWSIMYKGESPQTWQ 55

The following BLAST results are available for this feature:
BLAST of CsaV3_5G007960 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647985.11.5e-27100.00hypothetical protein Csa_023962, partial [Cucumis sativus][more]
BLAST of CsaV3_5G007960 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G007960 vs. NCBI nr
Match NameE-valueIdentityDescription
BLAST of CsaV3_5G007960 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_5G007960.1CsaV3_5G007960.1mRNA