CsaV3_4G035540 (gene) Cucumber (Chinese Long) v3
Overview
Sequences
The following sequences are available for this feature:
Legend: exonCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCGCTGTGAGCCGAGCTTCCACTCGAATCCCTCATCTGCTTGCTGCACGGGGAGCTTTGTCTCTTCATACCACAGCTCCGGCTTTGTCTTCCTCATCCACTGCTTCTCCGACGCCGTATGCGAGGCCGCTGCCTCCTTCGGCCTCGTCCCCGACGGGGCTTCCGAAGGCGGCTGAGTATGTCATCTCGAAGGTTGACGACCTCATGAACTGGGCTCGCCGTGGTTCTATCTGGCCTATGACTTTCGGCCTTGCTTGTTGCGCTGTTGAAATGATGCACACCGGTGCTGCCCGCTATGACCTCGATCGCTTTGGTGTCATCTTTCGTCCTAGCCCTAGGCAATCTGATTGTATGATTGTCGCCGGTACCCTCACCAACAAGATGGCTCCAGCTCTTCGCAAGTTAGTTCTCTCCATTAAATAAAGCTTGTTGATTCCTGATTTTTTGGACCCGACTGGATAATTGACTGAACTACTAGATTGACGGAAAATTTTCATATTGAGATCGAAGTTTAGAATTATGTGATTTTTCAGTTTCTGGAGTTGTTCCTTTTGTCAATTGCTCCTGGCCTGTAGGTTGTAGTGCGTACTTGTTTTGTCCATCTAAACTTGTGAAGATATTATTCCTGTCTGCAATGATCATAGCATGTTTATCTTTTCTTAATCTGGTATGTTATCTAAAAGTTTAAAGATTTAAGTGGATTATACCATTGTAGTTATCTGCTTATTTTCTTATTTATTGGGTCAAATTAATTTGATTAAATGTATTGATTGTCAATAATACAATGCTTCAGCCTCTATGTCAATGGATTTTAGGGGAGGTTCTTTTTCTTCATTATGAAAAACGGGTGGATTACTTTCGATATATTGGATTACTGAATTGTGCAGTGCTAATTGGGAAATTTATCTTGTTAGGCCATCTTGTTCACCTAGATTCATGTTATTTATTTTTATGAATTTTCACTCATCACATGACTTCCATGGTTTACGAGGAAAATTTGTGAAGTAATCATGAAAGTAGTTCCTGTACAGAGTTTTTTCACTTCATCATCTTGGCATGGTGTCTGGTGAATTCTGTTTGGGTTGAGTAATCATGATTTCCCGAACAGTCATCTATTTATATCTGTTCTATTTGTTCGAGTGGTTAATGTGTCAATGAAGCATGTGACTGTTCTATTTGTTTTGAAGGTTTCCTTTATCCTTATTATTTTAATCTATGAATTTGAAATGTGCATTGTATAGTAAAACTTCCAAACACTGAAATATGTGAAGAAAGTATATGTTGGACATCTTTCCAAGTTTGACTAGAATTGCTGGAGTCATTTCACATAAGTAGCTAACTTCTATGTACGAATTTCTGTTTATTGAGGAAAATGGAACTAAAGCCTAGAGGAATTCACCAATTTAGATACAGTACCCCCTCACTTTAGAATTCTTATTTTTTAATCTTGATGGGTAGAAATGAAGTTTTAATATGACCAAGAGAACTCTAAATTCTATTCGTGAGGATTTTCTTACGAAAATGTAATAATGGGATAAGAAGTGAGTCACAATGATATGTGAATTTCTTTGAACTTGTTTCATTTATATGGTGGTATTGCATGTAATTGTGGTAGACTATGAAATCCTTTATTTTGAATGAAATAAGGTTCCCATGCTTTCTTCTCTCAATCCAGCTCTTTATACCTATGGGGGTTGTAGTGTGCTAGTGAGGTTGGCTTTTCAGGATATTAAGCTATTTTCTAAAAATATCTCATTGAAATGGTGCATGAATTTGATAAATGCAATATAGACTAAAATCCAAATAAACGGATGCTATAGAAGCAAATAAAAAGCTAAATGGATGCTATTGAAGCAAATAAAAATTATAATGGAGGAAGACAACCCAAATATTAATCCTTTATCAAAGTTAAATACCATTATCTCATATTTGTATTTGTTTGTGTCAATGTTTATGTTGCTGCTATGGCTATTTTCAATGTTTAAGAGTCCCATCAATGCTTGACCTGAATGCTCCATAACTTCATTTATCAAGCTTGGAACTCAGACTTCCTGTTGGTGGTTAATGAACCATTATCTTTGTTGTTGGATCTGAGAATGCTACTATAGTCTAGCTTCAATTTTCTAAGTTTAGGGAATCCCTTGATTATTACATTGAAAACCAGTTTGGTCGTATAAATAGGTTATAATACCACCTGTTTATTCATTCCTTTCAATGAAAACTTGAAGAAAGACTGTACTTAATTCATTGTTTCTGTAATCTGTAGGGCTCTTCAACAAAAGTTGTGGCTTTTAACCCAACGGATAACCATGGTGGTTAAGGCCTTGGATTCATACAACTTTTACTTATGACCGTTAGACATTAAGTCATTAACTGACACACAGGCTTTTATTGCTAGCCCTTAGGTTTTTATTTTATGAGGCTCTGTTCTGAGATTAATAATGTCTATGATAACAACAATGGAAGTATGCTTATCAATTGATTAAGAGATGAACAACTAGATCTTGTCAGGCTGACTGCGTGTGAGATCCTTTCACGACAAGGGAGGTTTTGGAATCCTCTGAACTAGGCCGATAATTTTATTGTCTGTTTAAAATTTTAAATATTTTAATTTTTCTGTTGGGTTTTCTGATAAATCAATTCACCATCTCACCCAAGCTACACTTACTCTTTGTTCTCTGCAGGGTTTATGATCAAATGCCAGAACCGCGATGGGTTATATCCATGGGAAGCTGTGCAAATGGTGGTGGATACTATCACTACTCATACTCAGTCGTTCGGGGTTGTGATCGAATTGTCCCTGTCGATATCTACGTTCCTGGTTGCCCTCCTACTGCTGAGGCATTACTTTACGGAATCCTTCAATTGCAGAAGAAGATCAACAGACGCAAAGATTTCCTCCAGTGGTGGACCAAGTGA ATGGCCGCTGTGAGCCGAGCTTCCACTCGAATCCCTCATCTGCTTGCTGCACGGGGAGCTTTGTCTCTTCATACCACAGCTCCGGCTTTGTCTTCCTCATCCACTGCTTCTCCGACGCCGTATGCGAGGCCGCTGCCTCCTTCGGCCTCGTCCCCGACGGGGCTTCCGAAGGCGGCTGAGTATGTCATCTCGAAGGTTGACGACCTCATGAACTGGGCTCGCCGTGGTTCTATCTGGCCTATGACTTTCGGCCTTGCTTGTTGCGCTGTTGAAATGATGCACACCGGTGCTGCCCGCTATGACCTCGATCGCTTTGGTGTCATCTTTCGTCCTAGCCCTAGGCAATCTGATTGTATGATTGTCGCCGGTACCCTCACCAACAAGATGGCTCCAGCTCTTCGCAAGGTTTATGATCAAATGCCAGAACCGCGATGGGTTATATCCATGGGAAGCTGTGCAAATGGTGGTGGATACTATCACTACTCATACTCAGTCGTTCGGGGTTGTGATCGAATTGTCCCTGTCGATATCTACGTTCCTGGTTGCCCTCCTACTGCTGAGGCATTACTTTACGGAATCCTTCAATTGCAGAAGAAGATCAACAGACGCAAAGATTTCCTCCAGTGGTGGACCAAGTGA ATGGCCGCTGTGAGCCGAGCTTCCACTCGAATCCCTCATCTGCTTGCTGCACGGGGAGCTTTGTCTCTTCATACCACAGCTCCGGCTTTGTCTTCCTCATCCACTGCTTCTCCGACGCCGTATGCGAGGCCGCTGCCTCCTTCGGCCTCGTCCCCGACGGGGCTTCCGAAGGCGGCTGAGTATGTCATCTCGAAGGTTGACGACCTCATGAACTGGGCTCGCCGTGGTTCTATCTGGCCTATGACTTTCGGCCTTGCTTGTTGCGCTGTTGAAATGATGCACACCGGTGCTGCCCGCTATGACCTCGATCGCTTTGGTGTCATCTTTCGTCCTAGCCCTAGGCAATCTGATTGTATGATTGTCGCCGGTACCCTCACCAACAAGATGGCTCCAGCTCTTCGCAAGGTTTATGATCAAATGCCAGAACCGCGATGGGTTATATCCATGGGAAGCTGTGCAAATGGTGGTGGATACTATCACTACTCATACTCAGTCGTTCGGGGTTGTGATCGAATTGTCCCTGTCGATATCTACGTTCCTGGTTGCCCTCCTACTGCTGAGGCATTACTTTACGGAATCCTTCAATTGCAGAAGAAGATCAACAGACGCAAAGATTTCCTCCAGTGGTGGACCAAGTGA MAAVSRASTRIPHLLAARGALSLHTTAPALSSSSTASPTPYARPLPPSASSPTGLPKAAEYVISKVDDLMNWARRGSIWPMTFGLACCAVEMMHTGAARYDLDRFGVIFRPSPRQSDCMIVAGTLTNKMAPALRKVYDQMPEPRWVISMGSCANGGGYYHYSYSVVRGCDRIVPVDIYVPGCPPTAEALLYGILQLQKKINRRKDFLQWWTK* Homology
BLAST of CsaV3_4G035540 vs. NCBI nr
Match: XP_004141310.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucumis sativus] >KGN55322.1 hypothetical protein Csa_012723 [Cucumis sativus]) HSP 1 Score: 436.8 bits (1122), Expect = 1.1e-118 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. NCBI nr
Match: XP_038897936.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Benincasa hispida]) HSP 1 Score: 433.7 bits (1114), Expect = 9.1e-118 Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. NCBI nr
Match: XP_008452704.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucumis melo] >KAA0064489.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 7 [Cucumis melo var. makuwa] >TYK20101.1 NADH dehydrogenase (ubiquinone) iron-sulfur protein 7 [Cucumis melo var. makuwa]) HSP 1 Score: 433.3 bits (1113), Expect = 1.2e-117 Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. NCBI nr
Match: XP_022936396.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucurbita moschata] >XP_023534809.1 NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial-like [Cucurbita pepo subsp. pepo] >KAG6591456.1 hypothetical protein SDJN03_13802, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 426.8 bits (1096), Expect = 1.1e-115 Identity = 206/212 (97.17%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. NCBI nr
Match: XP_022977107.1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial [Cucurbita maxima]) HSP 1 Score: 425.2 bits (1092), Expect = 3.2e-115 Identity = 205/212 (96.70%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. ExPASy Swiss-Prot
Match: Q42577 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=At5g11770 PE=1 SV=1) HSP 1 Score: 360.1 bits (923), Expect = 1.7e-98 Identity = 180/220 (81.82%), Postives = 193/220 (87.73%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. ExPASy Swiss-Prot
Match: P42027 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Brassica oleracea OX=3712 PE=1 SV=1) HSP 1 Score: 359.8 bits (922), Expect = 2.2e-98 Identity = 178/217 (82.03%), Postives = 192/217 (88.48%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. ExPASy Swiss-Prot
Match: Q43844 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Solanum tuberosum OX=4113 PE=2 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 5.6e-94 Identity = 161/193 (83.42%), Postives = 171/193 (88.60%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. ExPASy Swiss-Prot
Match: O21272 (NADH-ubiquinone oxidoreductase 20 kDa subunit OS=Reclinomonas americana OX=48483 GN=NAD10 PE=3 SV=1) HSP 1 Score: 292.7 bits (748), Expect = 3.3e-78 Identity = 129/153 (84.31%), Postives = 143/153 (93.46%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. ExPASy Swiss-Prot
Match: P42026 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Bos taurus OX=9913 GN=NDUFS7 PE=1 SV=1) HSP 1 Score: 289.7 bits (740), Expect = 2.8e-77 Identity = 150/221 (67.87%), Postives = 171/221 (77.38%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. ExPASy TrEMBL
Match: A0A0A0L3Y8 (Oxidored_q6 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_4G645960 PE=3 SV=1) HSP 1 Score: 436.8 bits (1122), Expect = 5.2e-119 Identity = 212/212 (100.00%), Postives = 212/212 (100.00%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. ExPASy TrEMBL
Match: A0A5D3D968 (NADH dehydrogenase (Ubiquinone) iron-sulfur protein 7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold134G002250 PE=3 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 5.7e-118 Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. ExPASy TrEMBL
Match: A0A1S3BUF1 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Cucumis melo OX=3656 GN=LOC103493646 PE=3 SV=1) HSP 1 Score: 433.3 bits (1113), Expect = 5.7e-118 Identity = 210/212 (99.06%), Postives = 210/212 (99.06%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. ExPASy TrEMBL
Match: A0A6J1F7C6 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Cucurbita moschata OX=3662 GN=LOC111443026 PE=3 SV=1) HSP 1 Score: 426.8 bits (1096), Expect = 5.4e-116 Identity = 206/212 (97.17%), Postives = 208/212 (98.11%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. ExPASy TrEMBL
Match: A0A6J1IHI6 (NADH dehydrogenase [ubiquinone] iron-sulfur protein 7, mitochondrial OS=Cucurbita maxima OX=3661 GN=LOC111477275 PE=3 SV=1) HSP 1 Score: 425.2 bits (1092), Expect = 1.6e-115 Identity = 205/212 (96.70%), Postives = 207/212 (97.64%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. TAIR 10
Match: AT5G11770.1 (NADH-ubiquinone oxidoreductase 20 kDa subunit, mitochondrial ) HSP 1 Score: 360.1 bits (923), Expect = 1.2e-99 Identity = 180/220 (81.82%), Postives = 193/220 (87.73%), Query Frame = 0
BLAST of CsaV3_4G035540 vs. TAIR 10
Match: ATCG00430.1 (photosystem II reaction center protein G ) HSP 1 Score: 166.8 bits (421), Expect = 1.9e-41 Identity = 69/142 (48.59%), Postives = 106/142 (74.65%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (Chinese Long) v3
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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